Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20814
         (490 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    23   1.5  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       22   3.4  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   7.9  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    21   7.9  

>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 64  CRILKWSQGLHPYRSS 111
           C+++K+ Q L PY SS
Sbjct: 113 CKVVKYGQTLGPYLSS 128


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 8/27 (29%), Positives = 9/27 (33%)
 Frame = +1

Query: 385 CDATRHSCLGFADDGGHRDRPRPCAHH 465
           CD    SC+      G    P  C  H
Sbjct: 15  CDDEVESCIAVGVGSGRNSAPSICGEH 41


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = -1

Query: 232 GSASCMPVARDFSPRDIDQRKR 167
           GS + + + +DF+  D+D+  R
Sbjct: 172 GSRTPIEIPQDFTASDLDEEHR 193


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 434 WPPSSANPRQLCLVASQ 384
           +PP+  NP  +C  A+Q
Sbjct: 189 FPPTMINPSAICESAAQ 205


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,845
Number of Sequences: 336
Number of extensions: 2751
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11420693
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)