Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20814
(490 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 27 0.26
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 23 4.2
U29486-1|AAC46995.1| 695|Anopheles gambiae ATP-binding-cassette... 23 7.4
U29485-1|AAC46994.1| 695|Anopheles gambiae ATP-binding-cassette... 23 7.4
U29484-1|AAC47423.1| 673|Anopheles gambiae ATP-binding-cassette... 23 7.4
AF004916-1|AAB94672.1| 686|Anopheles gambiae pro-phenol oxidase... 23 7.4
AY341187-1|AAR13751.1| 189|Anopheles gambiae GNBP A1 protein. 22 9.8
AY341186-1|AAR13750.1| 189|Anopheles gambiae GNBP A1 protein. 22 9.8
AY341185-1|AAR13749.1| 189|Anopheles gambiae GNBP A1 protein. 22 9.8
AY341184-1|AAR13748.1| 187|Anopheles gambiae GNBP A1 protein. 22 9.8
AY341183-1|AAR13747.1| 189|Anopheles gambiae GNBP A1 protein. 22 9.8
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 27.5 bits (58), Expect = 0.26
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = -3
Query: 434 WPPSSANPRQLCLVASQNPHVGARIDASLSTSPLEAYKLKAYSSRPHPATCKG 276
W P A R+LC AS N H +R+D + E ++ + + T KG
Sbjct: 311 WTPERAQLRELCKEASDNAH--SRVDPDERAAASEIHQERRSELKRAITTGKG 361
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 23.4 bits (48), Expect = 4.2
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +2
Query: 107 RRVRYWSDRKIVLQNKGVQ 163
RRV W +R+ +++N G+Q
Sbjct: 1151 RRVARWRERQRMIRNGGIQ 1169
>U29486-1|AAC46995.1| 695|Anopheles gambiae ATP-binding-cassette
protein protein.
Length = 695
Score = 22.6 bits (46), Expect = 7.4
Identities = 13/44 (29%), Positives = 18/44 (40%)
Frame = +1
Query: 247 WKLDRTTGQVPLQVAGCGREEYAFNLYASRGDVLRDASIRAPTC 378
WK ++ G V Q+ C R Y + G+ D R P C
Sbjct: 53 WK-PKSYGSVKGQIPQCERLTYTWKEIDVFGEAPTDGKPREPLC 95
>U29485-1|AAC46994.1| 695|Anopheles gambiae ATP-binding-cassette
protein protein.
Length = 695
Score = 22.6 bits (46), Expect = 7.4
Identities = 13/44 (29%), Positives = 18/44 (40%)
Frame = +1
Query: 247 WKLDRTTGQVPLQVAGCGREEYAFNLYASRGDVLRDASIRAPTC 378
WK ++ G V Q+ C R Y + G+ D R P C
Sbjct: 53 WK-PKSYGSVKGQIPQCERLTYTWKEIDVFGEAPTDGKPREPLC 95
>U29484-1|AAC47423.1| 673|Anopheles gambiae ATP-binding-cassette
protein protein.
Length = 673
Score = 22.6 bits (46), Expect = 7.4
Identities = 13/44 (29%), Positives = 18/44 (40%)
Frame = +1
Query: 247 WKLDRTTGQVPLQVAGCGREEYAFNLYASRGDVLRDASIRAPTC 378
WK ++ G V Q+ C R Y + G+ D R P C
Sbjct: 31 WK-PKSYGSVKGQIPQCERLTYTWKEIDVFGEAPTDGKPREPLC 73
>AF004916-1|AAB94672.1| 686|Anopheles gambiae pro-phenol oxidase
subunit 2 protein.
Length = 686
Score = 22.6 bits (46), Expect = 7.4
Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 41 DENKSASHAES*SGLKGCIHTDRR-VRYWSDRKI 139
DEN + + + S GL+ ++ DRR + Y DR++
Sbjct: 619 DENVNCNDSHSFCGLRDQLYPDRRPMGYPFDRRM 652
>AY341187-1|AAR13751.1| 189|Anopheles gambiae GNBP A1 protein.
Length = 189
Score = 22.2 bits (45), Expect = 9.8
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = +3
Query: 48 TNQPAMPNLEVVSRVASIPIVVSGIGVTEK 137
TN+PA+PN ++ + G +T+K
Sbjct: 81 TNKPALPNGTIIYYWVYVQFANEGYWLTDK 110
>AY341186-1|AAR13750.1| 189|Anopheles gambiae GNBP A1 protein.
Length = 189
Score = 22.2 bits (45), Expect = 9.8
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = +3
Query: 48 TNQPAMPNLEVVSRVASIPIVVSGIGVTEK 137
TN+PA+PN ++ + G +T+K
Sbjct: 81 TNKPALPNGTIIYYWVYVQFANEGYWLTDK 110
>AY341185-1|AAR13749.1| 189|Anopheles gambiae GNBP A1 protein.
Length = 189
Score = 22.2 bits (45), Expect = 9.8
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = +3
Query: 48 TNQPAMPNLEVVSRVASIPIVVSGIGVTEK 137
TN+PA+PN ++ + G +T+K
Sbjct: 81 TNKPALPNGTIIYYWVYVQFANEGYWLTDK 110
>AY341184-1|AAR13748.1| 187|Anopheles gambiae GNBP A1 protein.
Length = 187
Score = 22.2 bits (45), Expect = 9.8
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = +3
Query: 48 TNQPAMPNLEVVSRVASIPIVVSGIGVTEK 137
TN+PA+PN ++ + G +T+K
Sbjct: 81 TNKPALPNGTIIYYWVYVQFANEGYWLTDK 110
>AY341183-1|AAR13747.1| 189|Anopheles gambiae GNBP A1 protein.
Length = 189
Score = 22.2 bits (45), Expect = 9.8
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = +3
Query: 48 TNQPAMPNLEVVSRVASIPIVVSGIGVTEK 137
TN+PA+PN ++ + G +T+K
Sbjct: 81 TNKPALPNGTIIYYWVYVQFANEGYWLTDK 110
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 531,452
Number of Sequences: 2352
Number of extensions: 10609
Number of successful extensions: 28
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 43131618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -