Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20814
         (490 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC029054-1|AAH29054.1|  511|Homo sapiens PDZK7 protein protein.        31   2.1  
AL133215-20|CAI10934.1|  517|Homo sapiens novel protein protein.       31   2.1  
AK026862-1|BAB15577.1|  517|Homo sapiens protein ( Homo sapiens ...    31   2.1  
BT007235-1|AAP35899.1|  434|Homo sapiens cargo selection protein...    30   3.7  
BC019278-1|AAH19278.1|  434|Homo sapiens mannose-6-phosphate rec...    30   3.7  
BC005818-1|AAH05818.1|  434|Homo sapiens mannose-6-phosphate rec...    30   3.7  
AK223054-1|BAD96774.1|  433|Homo sapiens mannose 6 phosphate rec...    30   3.7  
BC007566-1|AAH07566.1|  434|Homo sapiens mannose-6-phosphate rec...    30   4.9  
BC001590-1|AAH01590.1|  434|Homo sapiens mannose-6-phosphate rec...    30   4.9  
AF057140-1|AAC39751.1|  434|Homo sapiens cargo selection protein...    30   4.9  
AF055574-1|AAD11622.1|  434|Homo sapiens placental protein 17b1 ...    29   6.5  
U90653-1|AAB86591.2|  293|Homo sapiens DHHC-domain-containing cy...    29   8.6  
BC021908-1|AAH21908.1|  485|Homo sapiens zinc finger, DHHC-type ...    29   8.6  
AL133227-3|CAI40553.1|  196|Homo sapiens solute carrier family 3...    29   8.6  

>BC029054-1|AAH29054.1|  511|Homo sapiens PDZK7 protein protein.
          Length = 511

 Score = 31.1 bits (67), Expect = 2.1
 Identities = 16/35 (45%), Positives = 20/35 (57%)
 Frame = -3

Query: 395 VASQNPHVGARIDASLSTSPLEAYKLKAYSSRPHP 291
           + S  PH G R+D++LS SP  A  L    SRP P
Sbjct: 397 IRSDGPHPGRRLDSALSESPKTALLLAL--SRPRP 429


>AL133215-20|CAI10934.1|  517|Homo sapiens novel protein protein.
          Length = 517

 Score = 31.1 bits (67), Expect = 2.1
 Identities = 16/35 (45%), Positives = 20/35 (57%)
 Frame = -3

Query: 395 VASQNPHVGARIDASLSTSPLEAYKLKAYSSRPHP 291
           + S  PH G R+D++LS SP  A  L    SRP P
Sbjct: 397 IRSDGPHPGRRLDSALSESPKTALLLAL--SRPRP 429


>AK026862-1|BAB15577.1|  517|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ23209 fis, clone ADSH00512. ).
          Length = 517

 Score = 31.1 bits (67), Expect = 2.1
 Identities = 16/35 (45%), Positives = 20/35 (57%)
 Frame = -3

Query: 395 VASQNPHVGARIDASLSTSPLEAYKLKAYSSRPHP 291
           + S  PH G R+D++LS SP  A  L    SRP P
Sbjct: 397 IRSDGPHPGRRLDSALSESPKTALLLAL--SRPRP 429


>BT007235-1|AAP35899.1|  434|Homo sapiens cargo selection protein
           (mannose 6 phosphate receptor binding protein) protein.
          Length = 434

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 17/55 (30%), Positives = 25/55 (45%)
 Frame = +3

Query: 78  VVSRVASIPIVVSGIGVTEKLYFKIRESNPLFRWSMSLGEKSLATGIQLALPAVQ 242
           VV RVAS+P++ S   +    Y   +ES P  +      EK + T    A+   Q
Sbjct: 25  VVDRVASMPLISSTCDMVSAAYASTKESYPHIKTVCDAAEKGVRTLTAAAVSGAQ 79


>BC019278-1|AAH19278.1|  434|Homo sapiens mannose-6-phosphate
           receptor binding protein 1 protein.
          Length = 434

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 17/55 (30%), Positives = 25/55 (45%)
 Frame = +3

Query: 78  VVSRVASIPIVVSGIGVTEKLYFKIRESNPLFRWSMSLGEKSLATGIQLALPAVQ 242
           VV RVAS+P++ S   +    Y   +ES P  +      EK + T    A+   Q
Sbjct: 25  VVDRVASMPLISSTCDMVSAAYASTKESYPHIKTVCDAAEKGVRTLTAAAVSGAQ 79


>BC005818-1|AAH05818.1|  434|Homo sapiens mannose-6-phosphate
           receptor binding protein 1 protein.
          Length = 434

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 17/55 (30%), Positives = 25/55 (45%)
 Frame = +3

Query: 78  VVSRVASIPIVVSGIGVTEKLYFKIRESNPLFRWSMSLGEKSLATGIQLALPAVQ 242
           VV RVAS+P++ S   +    Y   +ES P  +      EK + T    A+   Q
Sbjct: 25  VVDRVASMPLISSTCDMVSAAYASTKESYPHIKTVCDAAEKGVRTLTAAAVSGAQ 79


>AK223054-1|BAD96774.1|  433|Homo sapiens mannose 6 phosphate
           receptor binding protein 1 variant protein.
          Length = 433

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 17/55 (30%), Positives = 25/55 (45%)
 Frame = +3

Query: 78  VVSRVASIPIVVSGIGVTEKLYFKIRESNPLFRWSMSLGEKSLATGIQLALPAVQ 242
           VV RVAS+P++ S   +    Y   +ES P  +      EK + T    A+   Q
Sbjct: 25  VVDRVASMPLISSTCDMVSAAYASTKESYPHIKTVCDAAEKGVRTLTAAAVSGAQ 79


>BC007566-1|AAH07566.1|  434|Homo sapiens mannose-6-phosphate
           receptor binding protein 1 protein.
          Length = 434

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 17/55 (30%), Positives = 25/55 (45%)
 Frame = +3

Query: 78  VVSRVASIPIVVSGIGVTEKLYFKIRESNPLFRWSMSLGEKSLATGIQLALPAVQ 242
           VV RVAS+P++ S   +    Y   +ES P  +      EK + T    A+   Q
Sbjct: 25  VVDRVASMPLISSTCDMVSAAYASTKESYPHVKTVCDAAEKGVRTLTAAAVSGAQ 79


>BC001590-1|AAH01590.1|  434|Homo sapiens mannose-6-phosphate
           receptor binding protein 1 protein.
          Length = 434

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 17/55 (30%), Positives = 25/55 (45%)
 Frame = +3

Query: 78  VVSRVASIPIVVSGIGVTEKLYFKIRESNPLFRWSMSLGEKSLATGIQLALPAVQ 242
           VV RVAS+P++ S   +    Y   +ES P  +      EK + T    A+   Q
Sbjct: 25  VVDRVASMPLISSTCDMVSAAYASTKESYPHVKTVCDAAEKGVRTLTAAAVSGAQ 79


>AF057140-1|AAC39751.1|  434|Homo sapiens cargo selection protein
           TIP47 protein.
          Length = 434

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 17/55 (30%), Positives = 25/55 (45%)
 Frame = +3

Query: 78  VVSRVASIPIVVSGIGVTEKLYFKIRESNPLFRWSMSLGEKSLATGIQLALPAVQ 242
           VV RVAS+P++ S   +    Y   +ES P  +      EK + T    A+   Q
Sbjct: 25  VVDRVASMPLISSTCDMVSAAYASTKESYPHVKTVCDAAEKGVRTLTAAAVSGAQ 79


>AF055574-1|AAD11622.1|  434|Homo sapiens placental protein 17b1
           protein.
          Length = 434

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
 Frame = +3

Query: 78  VVSRVASIPIVVSGIGVTEKLYFKIRESNPLFRWSMSLGEKSL----ATGIQLALPAVQL 245
           VV RVAS+P++ S   +    Y   +ES P  +      EK +    A  +  A P +  
Sbjct: 25  VVDRVASMPLISSTCDMVSAAYASTKESYPHVKTVCDAAEKGVRTLTAAAVSWAQPILSK 84

Query: 246 LETRSYNWTSSFASR 290
           LE +  +  S +A R
Sbjct: 85  LEPQIAS-ASEYAHR 98


>U90653-1|AAB86591.2|  293|Homo sapiens DHHC-domain-containing
           cysteine-rich protein protein.
          Length = 293

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = -2

Query: 117 RTRRSVWMQPLRPLQDSAWLADLF 46
           R+RR+ W  P  PLQ  AWL  LF
Sbjct: 38  RSRRNGWSWPPHPLQIVAWLLYLF 61


>BC021908-1|AAH21908.1|  485|Homo sapiens zinc finger, DHHC-type
           containing 1 protein.
          Length = 485

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = -2

Query: 117 RTRRSVWMQPLRPLQDSAWLADLF 46
           R+RR+ W  P  PLQ  AWL  LF
Sbjct: 38  RSRRNGWSWPPHPLQIVAWLLYLF 61


>AL133227-3|CAI40553.1|  196|Homo sapiens solute carrier family 35,
           member C2 protein.
          Length = 196

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
 Frame = +3

Query: 201 SLATGIQLALPAVQLLE-TRSYNWTSSF-ASRWMWSRRVCLQFICLQRRCTQRRVNTCSD 374
           +LAT + + L     L  T S   +S++ AS W W  R  + F     RC+ RR+N+ S 
Sbjct: 91  ALATALDVGLSNWSFLYVTVSLPHSSTWRASPWCWGPRSSVAFAGPSPRCSCRRLNSASR 150

Query: 375 V 377
           +
Sbjct: 151 I 151


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,657,442
Number of Sequences: 237096
Number of extensions: 1703212
Number of successful extensions: 4385
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4201
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4380
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4366354454
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)