Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20809
(409 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0537 + 25363026-25363217,25363672-25363828,25364660-253646... 38 0.003
01_01_0572 - 4244714-4245311,4245694-4245736,4246172-4246283,424... 36 0.012
05_02_0073 + 6336649-6336710,6336846-6336894,6338079-6338468,633... 30 0.62
09_02_0053 - 3665202-3665900,3666109-3666359,3666612-3666938,366... 30 0.81
01_06_1742 - 39585879-39585994,39586089-39586238,39586288-395863... 30 0.81
09_06_0352 + 22472369-22472731,22472829-22472941,22473420-224742... 29 1.4
04_03_0659 - 18453778-18453903,18453976-18454963,18455496-184562... 29 1.4
11_01_0288 + 2151552-2151581,2151818-2151893,2152019-2153460 28 2.5
11_01_0110 + 850780-850805,851465-851537,851558-851720,851947-85... 28 2.5
07_03_1533 + 27523811-27524710 28 2.5
06_03_0602 - 22666227-22668740 28 2.5
06_02_0008 - 10552066-10552116,10552224-10552323,10552394-105524... 28 2.5
04_04_0376 + 24809804-24809888,24810575-24810703,24810797-248110... 28 3.3
04_01_0263 - 3532481-3532656,3532710-3532719,3532754-3532785,353... 28 3.3
03_03_0158 - 14951504-14951568,14952722-14952797,14952876-149529... 28 3.3
01_03_0003 + 11509530-11512772 28 3.3
11_06_0473 - 23992243-23992542,23993737-23993796 27 4.3
09_06_0241 + 21803476-21803604,21804968-21805026,21805117-21805444 27 4.3
09_04_0500 - 18120287-18122233 27 4.3
08_02_0911 + 22530370-22530497,22531083-22531126,22531224-225312... 27 4.3
01_01_1197 - 9630506-9630681,9630774-9630805,9630894-9630988,963... 27 4.3
09_06_0199 + 21526872-21527250,21527431-21527594,21527673-215277... 27 5.7
08_01_0626 - 5445676-5446687,5447099-5447430 27 5.7
01_01_0652 + 4975091-4975585 27 5.7
>03_05_0537 +
25363026-25363217,25363672-25363828,25364660-25364694,
25364803-25364848,25365277-25365311
Length = 154
Score = 37.9 bits (84), Expect = 0.003
Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 3/37 (8%)
Frame = +3
Query: 255 KKHHWLKVDFNRWQDEDESGD---DLDNMNDMFSDKD 356
+KH ++KVD+N+W DEDE D D D+ D +D+D
Sbjct: 97 EKHPYIKVDWNKWCDEDEESDAPVDSDDAFDEGNDRD 133
>01_01_0572 -
4244714-4245311,4245694-4245736,4246172-4246283,
4246462-4246551,4246625-4246787,4246909-4247015,
4247149-4247230,4247314-4247351,4247434-4247542,
4248031-4248095,4248358-4248468,4248610-4248747
Length = 551
Score = 35.9 bits (79), Expect = 0.012
Identities = 17/43 (39%), Positives = 28/43 (65%)
Frame = +3
Query: 279 DFNRWQDEDESGDDLDNMNDMFSDKDMNIQFGGDNEKDDSSSG 407
D N QD+D +D+++++D+ SD+D + + G KDD SSG
Sbjct: 400 DVNPEQDKDGGQEDVESLDDLSSDEDEDRDYNG---KDDDSSG 439
>05_02_0073 +
6336649-6336710,6336846-6336894,6338079-6338468,
6338677-6338902,6338983-6339270,6339594-6339967,
6340044-6340736
Length = 693
Score = 30.3 bits (65), Expect = 0.62
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +3
Query: 291 WQDEDESGDDLDNMNDMFSDKDMNIQFGGDNEKDDSSS 404
+ DED+ D D +NDM + D + G D +K +S S
Sbjct: 503 FDDEDDEDDKFDFLNDMSTYADTKVPQGEDFDKLESDS 540
>09_02_0053 -
3665202-3665900,3666109-3666359,3666612-3666938,
3667017-3667242,3667328-3667846,3668789-3668863,
3668963-3669052,3669142-3669222,3672176-3672222,
3672620-3672685,3673834-3673930,3673983-3674046,
3674160-3674278,3674448-3674563,3676675-3676708
Length = 936
Score = 29.9 bits (64), Expect = 0.81
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +3
Query: 297 DEDESGDDLDNMNDMFSDKDMNIQFGGDNEKDDSSS 404
D D+ D+LDN NDM + + G D++K ++ S
Sbjct: 743 DFDDEADELDNFNDMSTYAETKYPQGEDSDKLEADS 778
>01_06_1742 - 39585879-39585994,39586089-39586238,39586288-39586375,
39586479-39586640,39586753-39586877,39586992-39587030,
39587290-39587476,39587643-39587713,39589371-39589564,
39589656-39589767,39589899-39590082,39590177-39590503,
39590780-39591061,39591148-39591621,39591730-39591813,
39591850-39591939,39592024-39592247,39592503-39592600,
39592679-39593169,39593249-39593520,39594266-39594522,
39594672-39594890,39595007-39595167,39595249-39595441,
39595528-39595633,39595947-39596121,39596404-39596556,
39596663-39596794,39597120-39597184,39597754-39597819,
39598433-39598511,39598587-39598767,39598864-39598976
Length = 1889
Score = 29.9 bits (64), Expect = 0.81
Identities = 12/36 (33%), Positives = 25/36 (69%)
Frame = +3
Query: 297 DEDESGDDLDNMNDMFSDKDMNIQFGGDNEKDDSSS 404
D+DESGD+ D +++ ++ + + + G + +D+SSS
Sbjct: 1717 DDDESGDEDDGSDELPAEMESSEEEDGSDGQDESSS 1752
>09_06_0352 +
22472369-22472731,22472829-22472941,22473420-22474226,
22474314-22474620,22474862-22475027,22475491-22475534,
22476019-22476161,22477900-22477937,22478032-22478129,
22478130-22478220,22478514-22478693,22479311-22479495,
22479583-22479678,22480151-22480297,22480763-22480864,
22480932-22481564
Length = 1170
Score = 29.1 bits (62), Expect = 1.4
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 291 WQDEDESGDDLDNMNDMFSDKDMN 362
W D+DES D DN +D SD+ ++
Sbjct: 374 WHDDDESNDTADNWHDDNSDQPID 397
>04_03_0659 -
18453778-18453903,18453976-18454963,18455496-18456229,
18456292-18456360,18456528-18456605,18456703-18456789,
18456881-18456931,18457021-18457092,18457177-18457304,
18458194-18458275,18458705-18458754,18459043-18459096,
18459586-18459675,18459903-18459983,18460443-18460538,
18460960-18461022,18461313-18461402,18461630-18461698,
18462051-18462291
Length = 1082
Score = 29.1 bits (62), Expect = 1.4
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +3
Query: 279 DFNRWQDEDESGDDLDNMN-DMFS-DKDMNIQFGGDNEKD 392
D N+ +DED ++L+N N DMF+ N+Q DN +
Sbjct: 415 DTNQVEDEDLEDNELENWNLDMFNLSNGQNVQNSADNSTE 454
>11_01_0288 + 2151552-2151581,2151818-2151893,2152019-2153460
Length = 515
Score = 28.3 bits (60), Expect = 2.5
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = +3
Query: 276 VDFNRWQDEDESGDDLDNMNDMFSDKDMNIQFGGDNEKDD 395
V FN ED+ GDD +D F + D F D DD
Sbjct: 191 VKFNLPPPEDDFGDDGSEFDDEFDEFDDEDDFDDDGLDDD 230
>11_01_0110 +
850780-850805,851465-851537,851558-851720,851947-852260,
852330-852409,852506-852848,853068-853166,853240-853360,
853567-853723,853976-854099,855275-855368,855866-857259,
857882-857924,858240-858458,859379-859605,859701-859948,
860246-860552,860725-861153
Length = 1486
Score = 28.3 bits (60), Expect = 2.5
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = +3
Query: 288 RWQDEDESGDDLDNMNDMFSDKDMNIQFGGDNEKDDSS 401
RW D+ D L+ ++ +F + + I FG D+S
Sbjct: 670 RWHASDDESDGLNYVDSVFGEIESTISFGDYGADSDTS 707
>07_03_1533 + 27523811-27524710
Length = 299
Score = 28.3 bits (60), Expect = 2.5
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 297 DEDESGDDLDNMNDMFSDKDMNIQFGGDNEKDDSSSG 407
D+D+ DD D+ +D D D + Q GGD++ G
Sbjct: 61 DDDDDDDDDDDDDDDDDDDDEDDQGGGDDDGGGGGGG 97
Score = 27.5 bits (58), Expect = 4.3
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 297 DEDESGDDLDNMNDMFSDKDMNIQFGGDNEKDD 395
DED GDD D+ +D D D + D++ DD
Sbjct: 204 DEDHGGDDDDDHDDDDDDDDDDDDDDDDDDDDD 236
Score = 26.6 bits (56), Expect = 7.6
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 294 QDEDESGDDLDNMNDMFSDKDMNIQFGGDNEKDD 395
+D+D GDD D+ D D D + D++ DD
Sbjct: 196 EDDDSGGDDEDHGGDDDDDHDDDDDDDDDDDDDD 229
>06_03_0602 - 22666227-22668740
Length = 837
Score = 28.3 bits (60), Expect = 2.5
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
Frame = -3
Query: 263 VFLLSLVNEGQYGSSTFSFANSTSINLPLLTHMLFLGSTSA*SGIKTSCIFFSGSH---- 96
+ LL L N G F+ NS+S+NL L F+GS S I + + S S
Sbjct: 256 LILLDLTNNRLGGEIPFALFNSSSLNLISLAVNNFVGSIPPISNISSPLWYLSLSQNNLS 315
Query: 95 --IPLNVIDLGSMFI 57
IP ++ +L S+ I
Sbjct: 316 GSIPSSIENLSSLEI 330
>06_02_0008 -
10552066-10552116,10552224-10552323,10552394-10552449,
10553950-10557180
Length = 1145
Score = 28.3 bits (60), Expect = 2.5
Identities = 16/55 (29%), Positives = 31/55 (56%)
Frame = -3
Query: 275 FKPMVFLLSLVNEGQYGSSTFSFANSTSINLPLLTHMLFLGSTSA*SGIKTSCIF 111
++P F+L N ++ + F+ +N+TS L+T +L L + + GI+T +F
Sbjct: 315 YRPATFVLRRHNLRRF--NIFTCSNATSFVASLVTIILLLSTELSRHGIRTQALF 367
>04_04_0376 +
24809804-24809888,24810575-24810703,24810797-24811020,
24811398-24811607,24811697-24811789,24811899-24811937,
24812041-24812130,24812214-24812316,24812388-24812468,
24812929-24813005,24813156-24813236,24814165-24814256,
24814536-24814662
Length = 476
Score = 27.9 bits (59), Expect = 3.3
Identities = 15/56 (26%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +3
Query: 228 ILAFINK**KKHHWLKVDFNRWQDED-ESGDDLDNMNDMFSDKDMNIQFGGDNEKD 392
+LA + K + ++ DF+++Q E E+ +++ D +D D+N + G D+ D
Sbjct: 59 LLAVVTKKDQPDEGIEDDFDKFQKEVIEAEAEVEASTDKAADNDINQEHGADDPDD 114
>04_01_0263 -
3532481-3532656,3532710-3532719,3532754-3532785,
3533237-3533348,3533586-3533649,3533778-3533843,
3533946-3534073,3534205-3534342,3534427-3534539,
3534611-3534776,3535045-3535107,3535197-3535304,
3535408-3535524,3535620-3535785,3535942-3536039,
3536136-3536233,3536378-3536514,3536654-3536878,
3536971-3537176,3537286-3537525
Length = 820
Score = 27.9 bits (59), Expect = 3.3
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 136 LYAEVDPKKSMWVNKGRLIEVLLAKEKVDEP 228
L +D +M V G +I+ LLA +KVD P
Sbjct: 265 LSLNIDVSTTMIVKPGPVIDFLLANQKVDHP 295
>03_03_0158 -
14951504-14951568,14952722-14952797,14952876-14952943,
14952997-14953156,14953239-14953425,14953982-14953986
Length = 186
Score = 27.9 bits (59), Expect = 3.3
Identities = 9/14 (64%), Positives = 14/14 (100%)
Frame = +3
Query: 267 WLKVDFNRWQDEDE 308
+LKVD+++WQDED+
Sbjct: 100 FLKVDWDKWQDEDD 113
>01_03_0003 + 11509530-11512772
Length = 1080
Score = 27.9 bits (59), Expect = 3.3
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = -3
Query: 113 FFSGSHIP-LNVIDLGSMFISGFSHSTLNVKKIR 15
FF+ H+ L V++LGS +S HS N+K++R
Sbjct: 608 FFTKPHMRFLRVLELGSCRLSELPHSVGNLKQLR 641
>11_06_0473 - 23992243-23992542,23993737-23993796
Length = 119
Score = 27.5 bits (58), Expect = 4.3
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +3
Query: 297 DEDESGDDLDNMNDMFSDKDMNIQFGGDNEKDDSSS 404
D D+ +D D +NDM + + + G D++K +S S
Sbjct: 59 DFDDETEDFDFLNDMSTYAETKVPQGEDSDKLESDS 94
>09_06_0241 + 21803476-21803604,21804968-21805026,21805117-21805444
Length = 171
Score = 27.5 bits (58), Expect = 4.3
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +3
Query: 303 DESGDDLDNMNDMFSDKDMNIQFGGDNEKDDSSSG 407
DE G+D D+ +D D + N G D+E DD G
Sbjct: 109 DEGGEDEDDDDD---DPEANGDGGSDDEDDDDDDG 140
>09_04_0500 - 18120287-18122233
Length = 648
Score = 27.5 bits (58), Expect = 4.3
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +3
Query: 294 QDEDESGDDLDNMNDMFSDKDMNIQ 368
++ED+ GD+ D+ DMF D N++
Sbjct: 507 EEEDDDGDEEDDDEDMFKDDAGNLK 531
>08_02_0911 +
22530370-22530497,22531083-22531126,22531224-22531267,
22531428-22531946,22532032-22532257,22532336-22532662,
22532915-22533165,22533374-22534072
Length = 745
Score = 27.5 bits (58), Expect = 4.3
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +3
Query: 297 DEDESGDDLDNMNDMFSDKDMNIQFGGDNEKDDSSS 404
D D+ D+LD NDM + + G D++K ++ S
Sbjct: 552 DFDDEADELDTFNDMSTYAETKYPQGEDSDKLEADS 587
>01_01_1197 -
9630506-9630681,9630774-9630805,9630894-9630988,
9631569-9631642,9631732-9631843,9631967-9632030,
9632210-9632275,9632396-9632526,9632884-9633021,
9633115-9633227,9633306-9633471,9633588-9633701,
9633791-9633853,9633953-9634060,9634143-9634259,
9634343-9634505,9634646-9634743,9634852-9634949,
9635054-9635190,9635309-9635530,9635625-9635830,
9636758-9636845,9638085-9638668
Length = 1054
Score = 27.5 bits (58), Expect = 4.3
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 136 LYAEVDPKKSMWVNKGRLIEVLLAKEKVDEP 228
L +D +M V G +++ LLA +KVD P
Sbjct: 408 LSLNIDVSTTMIVKPGPVVDFLLANQKVDHP 438
>09_06_0199 +
21526872-21527250,21527431-21527594,21527673-21527736,
21528001-21528134,21528302-21528385,21528526-21528600,
21528683-21528754,21528852-21528925,21529185-21529282,
21529355-21529464,21529794-21529862,21529944-21530018,
21530519-21530611,21530690-21530769,21530877-21530976,
21531150-21531586,21531676-21531706,21532873-21533822,
21533982-21534201
Length = 1102
Score = 27.1 bits (57), Expect = 5.7
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 6/39 (15%)
Frame = +3
Query: 297 DEDESGDDLDNMNDM----FSDKDMNIQFGGD--NEKDD 395
+EDESG DLD +D SD D GGD +E+DD
Sbjct: 63 EEDESGSDLDAPSDSGAEELSDSDDASLEGGDSGDEEDD 101
>08_01_0626 - 5445676-5446687,5447099-5447430
Length = 447
Score = 27.1 bits (57), Expect = 5.7
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3
Query: 294 QDEDESGDDLDNMNDMFSDKDMN 362
+DEDE+ DD D +M D+D++
Sbjct: 236 EDEDENNDDDDEEEEMEEDEDLD 258
>01_01_0652 + 4975091-4975585
Length = 164
Score = 27.1 bits (57), Expect = 5.7
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +3
Query: 288 RWQDE-DESGDDLDNMNDMFSDKDMNIQFGGDNEKDD 395
RW+ D+ DDLD+ +D D D++ GG ++ DD
Sbjct: 62 RWEAALDDPDDDLDDPDDDLDD-DLDDDDGGPDDLDD 97
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,511,524
Number of Sequences: 37544
Number of extensions: 187507
Number of successful extensions: 657
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 653
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 718652880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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