Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20806
         (452 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ139954-1|ABA29475.1|  451|Anopheles gambiae protein O-fucosylt...    23   3.8  
AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.     23   3.8  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    23   5.0  

>DQ139954-1|ABA29475.1|  451|Anopheles gambiae protein
           O-fucosyltransferase 2 protein.
          Length = 451

 Score = 23.4 bits (48), Expect = 3.8
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +2

Query: 107 TFNVECEKPDINIEPKSITFKGICEPEKKMH 199
           T+ +  E+  I   PK +TF   C+ EK M+
Sbjct: 410 TYRIYEEREIIGF-PKDLTFNTFCKSEKDMN 439


>AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.
          Length = 786

 Score = 23.4 bits (48), Expect = 3.8
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = +2

Query: 335 RNTIGLKWDFNRWQDED 385
           R  IG KW FN   DED
Sbjct: 745 RKAIGSKWIFNCKADED 761


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.0 bits (47), Expect = 5.0
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -2

Query: 322 LMKASMAHQPFLSPIVPQLTFLCNP 248
           ++ AS A QP L+P+VP       P
Sbjct: 79  VLAASPAPQPSLAPVVPSSVVTAPP 103


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 452,360
Number of Sequences: 2352
Number of extensions: 9122
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 38694201
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)