Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20803
         (371 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    36   2e-04
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   1.3  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   1.3  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   3.1  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   5.4  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    20   9.4  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 35.5 bits (78), Expect = 2e-04
 Identities = 24/88 (27%), Positives = 41/88 (46%)
 Frame = -3

Query: 282 ILAVSFLLVVLWCFKIFLIFSITFRFLIYIYKFFVDFSYLLLDIFKT*IHCFGFSFFQTL 103
           ++ + FLL + + +  F+IF++   FL+ IY FF  F    + +    + C  F FF  +
Sbjct: 137 VVPLFFLLCIYYFYCAFIIFTVHLLFLLCIYHFFCAFIIFTMHL----LFCCAFIFF-NM 191

Query: 102 SPRHLENISL*PFFLVFSHCILL*FSIF 19
               L  +      L+F  CI   +S F
Sbjct: 192 HLLFLLCLDYFTLHLLFLPCIYYFYSAF 219



 Score = 30.3 bits (65), Expect = 0.007
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = -3

Query: 276 AVSFLLVVLWCFKIFLIFSITFRFLIYIYKFFVDFSYLL 160
           A   LL V + +  F+IF++   FL+ IY F V   +LL
Sbjct: 106 AFIILLCVYYFYYAFIIFTVHLLFLLCIYYFVVPLFFLL 144



 Score = 26.2 bits (55), Expect = 0.11
 Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
 Frame = -3

Query: 369 LLFY*XPDLTLSIDPFFQFLQSFY*VPLLILAVSFL--LVVLWCFKIFLIFSITFRFLIY 196
           LLFY    + L I  F+     F    LL++ + +   + +L+C   F+IF++   FL+ 
Sbjct: 226 LLFYCVLIILLCIYYFYYAFILFTVHLLLLVCIYYFYYMHLLFCCA-FIIFTMHLLFLLC 284

Query: 195 IYKFFVDFSYLL 160
           IY F+     LL
Sbjct: 285 IYYFYCALIILL 296


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = +3

Query: 249  KEPPVKKKQPVSKEELNKTTEEIEKMDL*IALSQVINKTTT 371
            KE    +K   S  +LN+  E +EKM      S  ++  TT
Sbjct: 1097 KENEQLRKIQESLRDLNRKIESLEKMQYPDLRSPAVSNVTT 1137


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = +3

Query: 249  KEPPVKKKQPVSKEELNKTTEEIEKMDL*IALSQVINKTTT 371
            KE    +K   S  +LN+  E +EKM      S  ++  TT
Sbjct: 1097 KENEQLRKIQESLRDLNRKIESLEKMQYPDLRSPAVSNVTT 1137


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
 Frame = -3

Query: 288 LLILAVSFLLVVLWCFKIFLIF---SITFRFLIYI 193
           LL+ AVSFL++    F I ++     I +  L+YI
Sbjct: 245 LLMFAVSFLIITQVIFVICVLVQSEKIVWLHLVYI 279


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
 Frame = -3

Query: 288  LLILAVSFLLVVLWCFKIFLIFSITFRFLIYI-YKFFVDFSY 166
            LL+  +SFLLV    F + ++  +     + + Y  FV   Y
Sbjct: 877  LLMFGISFLLVTQTIFALCVVLQLQENDWLQLGYLIFVSTLY 918


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 19.8 bits (39), Expect = 9.4
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = -2

Query: 46  LYFIIIQYF 20
           LYFIIIQ F
Sbjct: 174 LYFIIIQLF 182


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,051
Number of Sequences: 336
Number of extensions: 924
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7722305
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)