Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20803
         (371 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC026012-1|AAH26012.1|  211|Homo sapiens C6orf128 protein protein.     29   3.6  
AL353579-2|CAI20317.1|  211|Homo sapiens protein ( Human DNA seq...    29   3.6  
AK098666-1|BAC05371.1|  229|Homo sapiens protein ( Homo sapiens ...    29   3.6  
AK023542-1|BAB14603.1|  127|Homo sapiens protein ( Homo sapiens ...    29   4.8  

>BC026012-1|AAH26012.1|  211|Homo sapiens C6orf128 protein protein.
          Length = 211

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 13/47 (27%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
 Frame = -3

Query: 285 LILAVSFLLVVLWCFKIFLIFSITFR-FLIYI-YKFFVDFSYLLLDI 151
           ++L +SF+ +++ CF ++ +++  FR  +IYI + FF + + +++ I
Sbjct: 67  IVLFLSFITILISCFLLYSVYAQIFRGLVIYIVWIFFYETANVVIQI 113


>AL353579-2|CAI20317.1|  211|Homo sapiens protein ( Human DNA
           sequence from clone RP3-355M6 on chromosome 6 Contains
           thePIM1 gene for pim-1 oncogene (PIM), a novel gene, the
           5' end of the asin A2 pim-1 oncogene).
          Length = 211

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 13/47 (27%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
 Frame = -3

Query: 285 LILAVSFLLVVLWCFKIFLIFSITFR-FLIYI-YKFFVDFSYLLLDI 151
           ++L +SF+ +++ CF ++ +++  FR  +IYI + FF + + +++ I
Sbjct: 67  IVLFLSFITILISCFLLYSVYAQIFRGLVIYIVWIFFYETANVVIQI 113


>AK098666-1|BAC05371.1|  229|Homo sapiens protein ( Homo sapiens
           cDNA FLJ25800 fis, clone TST07092. ).
          Length = 229

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 13/47 (27%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
 Frame = -3

Query: 285 LILAVSFLLVVLWCFKIFLIFSITFR-FLIYI-YKFFVDFSYLLLDI 151
           ++L +SF+ +++ CF ++ +++  FR  +IYI + FF + + +++ I
Sbjct: 67  IVLFLSFITILISCFLLYSVYAQIFRGLVIYIVWIFFYETANVVIQI 113


>AK023542-1|BAB14603.1|  127|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13480 fis, clone PLACE1003768. ).
          Length = 127

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -3

Query: 240 KIFLIFSITFRFLIYIYKFFVDFSYL 163
           KIF +F I F F++   +FFV F Y+
Sbjct: 16  KIFSLFKIGFFFIVEFKEFFVYFGYM 41


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,297,656
Number of Sequences: 237096
Number of extensions: 496404
Number of successful extensions: 1472
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1460
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1472
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2421480012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)