Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20803
(371 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z35663-2|CAA84735.2| 335|Caenorhabditis elegans Hypothetical pr... 34 0.037
AF024503-14|AAG24088.2| 292|Caenorhabditis elegans Serpentine r... 31 0.26
U13019-13|AAC24450.1| 336|Caenorhabditis elegans Serpentine rec... 31 0.35
Z99286-2|CAH60793.1| 310|Caenorhabditis elegans Hypothetical pr... 29 0.80
AF022980-10|AAG24193.1| 350|Caenorhabditis elegans Serpentine r... 29 0.80
AC006767-1|AAF60573.2| 332|Caenorhabditis elegans Serpentine re... 29 1.1
AF125463-7|AAD12863.1| 148|Caenorhabditis elegans Hypothetical ... 28 1.9
AC006655-1|AAF39875.1| 391|Caenorhabditis elegans Serpentine re... 28 1.9
U64845-5|AAC48027.1| 581|Caenorhabditis elegans Hypothetical pr... 28 2.4
U00049-3|AAC47059.1| 339|Caenorhabditis elegans Serpentine rece... 27 3.2
Z83123-7|CAB05612.2| 332|Caenorhabditis elegans Hypothetical pr... 27 4.3
AF130443-1|AAD28468.1| 956|Caenorhabditis elegans EAG K+ channe... 27 4.3
AF036695-1|AAB88348.2| 956|Caenorhabditis elegans Egg laying de... 27 4.3
Z75527-8|CAA99778.2| 316|Caenorhabditis elegans Hypothetical pr... 27 5.7
Z70266-1|CAB61045.1| 364|Caenorhabditis elegans Hypothetical pr... 27 5.7
AF083646-1|AAC32857.1| 364|Caenorhabditis elegans putative pota... 27 5.7
Z81062-3|CAB02948.2| 325|Caenorhabditis elegans Hypothetical pr... 26 7.5
Z82265-3|CAB05173.1| 471|Caenorhabditis elegans Hypothetical pr... 26 9.9
Z82057-2|CAD89759.1| 561|Caenorhabditis elegans Hypothetical pr... 26 9.9
Z49910-7|CAA90124.4| 384|Caenorhabditis elegans Hypothetical pr... 26 9.9
AF098997-9|AAC68720.1| 325|Caenorhabditis elegans Serpentine re... 26 9.9
AF016450-6|AAB65982.1| 311|Caenorhabditis elegans Serpentine re... 26 9.9
>Z35663-2|CAA84735.2| 335|Caenorhabditis elegans Hypothetical
protein T04A8.2 protein.
Length = 335
Score = 33.9 bits (74), Expect = 0.037
Identities = 23/55 (41%), Positives = 30/55 (54%)
Frame = -3
Query: 315 FLQSFY*VPLLILAVSFLLVVLWCFKIFLIFSITFRFLIYIYKFFVDFSYLLLDI 151
FLQ Y +P IL + L +L FK I++ + FLIY FV FS + LDI
Sbjct: 33 FLQIAYLIPGGILNILLLYTIL--FKNSEIYASSSFFLIYSTDCFVSFSMIFLDI 85
>AF024503-14|AAG24088.2| 292|Caenorhabditis elegans Serpentine
receptor, class x protein21 protein.
Length = 292
Score = 31.1 bits (67), Expect = 0.26
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Frame = -3
Query: 366 LFY*XPDLTLSIDPFFQFLQSFY*VPLLILAVSFLL-VVLWC---FKIFLIFSITFRFLI 199
LFY P +PF +F + ++I S L +++ C F +FL F F
Sbjct: 58 LFYVCPMQLTDFEPFVKFSKYIGLAAMIIYEASMNLHLIIACNRLFAVFLPFHYDQLFTN 117
Query: 198 YIYKFFVDFSYLL 160
Y KF V FS+L+
Sbjct: 118 YNTKFMVAFSWLI 130
>U13019-13|AAC24450.1| 336|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 9 protein.
Length = 336
Score = 30.7 bits (66), Expect = 0.35
Identities = 24/70 (34%), Positives = 34/70 (48%)
Frame = -3
Query: 351 PDLTLSIDPFFQFLQSFY*VPLLILAVSFLLVVLWCFKIFLIFSITFRFLIYIYKFFVDF 172
P+ + ++ LQ+ Y VP L +L V+W K ++S F+IY V F
Sbjct: 18 PNYSYLVENIKYLLQAAYMVPPAFLYAR-ILYVIWV-KHRKVYSRHQFFVIYSMDSIVGF 75
Query: 171 SYLLLDIFKT 142
LLLDIF T
Sbjct: 76 ILLLLDIFIT 85
>Z99286-2|CAH60793.1| 310|Caenorhabditis elegans Hypothetical
protein Y7A9C.8 protein.
Length = 310
Score = 29.5 bits (63), Expect = 0.80
Identities = 15/62 (24%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Frame = -3
Query: 336 SIDPFFQFLQ-SFY*VPLLILAVSFLLVVLWCFKI--FLIFSITFRFLIYIYKFFVDFSY 166
++ F++ ++ +FY + LLIL + L V +I +L+ + F ++ +Y+F F +
Sbjct: 57 TVSHFYEMVKFTFYLLVLLILCIPLLFVATHFSEIAVYLVICLAFFIILALYQFTETFHF 116
Query: 165 LL 160
++
Sbjct: 117 II 118
>AF022980-10|AAG24193.1| 350|Caenorhabditis elegans Serpentine
receptor, class j protein44 protein.
Length = 350
Score = 29.5 bits (63), Expect = 0.80
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Frame = -3
Query: 294 VPLLILAVSFLLVVLWCFKIFLIFSITFRFLIYIYKFFVDFS--YLLLDIF-KT*IHCFG 124
+P A++FL+ ++ + IF S F Y+ +F F+ Y ++++ IH FG
Sbjct: 10 LPRTFCALTFLVNPIFIYLIFSEKSSKFGNYRYLLLYFAIFNLLYSIMNVLVPLDIHTFG 69
Query: 123 FSFF 112
+SFF
Sbjct: 70 YSFF 73
>AC006767-1|AAF60573.2| 332|Caenorhabditis elegans Serpentine
receptor, class j protein55 protein.
Length = 332
Score = 29.1 bits (62), Expect = 1.1
Identities = 21/93 (22%), Positives = 41/93 (44%), Gaps = 3/93 (3%)
Frame = -3
Query: 303 FY*VPLLILAVSFLLVVLWCFKIFLIFSITFRFLIYIYKFFVDFSYLLLDIF---KT*IH 133
F +PL+ +SFL+ ++ + IF S F Y+ +F F+ + ++ IH
Sbjct: 7 FLYIPLIFCGLSFLVNPVFIYLIFTEKSTNFGNYRYLLLYFALFNLIYSVVYVAVPLDIH 66
Query: 132 CFGFSFFQTLSPRHLENISL*PFFLVFSHCILL 34
+ + FF T+ S F ++ C ++
Sbjct: 67 SYRYCFFLTVRNGWFSEASEINFGIIALRCTMV 99
>AF125463-7|AAD12863.1| 148|Caenorhabditis elegans Hypothetical
protein Y49F6C.2 protein.
Length = 148
Score = 28.3 bits (60), Expect = 1.9
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = -3
Query: 291 PLLILAVSFLLVVLWCFKIFLIFSITFRFLIYIYKFFVDFSY 166
PLL + +FL ++++ +KI I F+F + I F FS+
Sbjct: 12 PLLKITCNFLKLLIFAYKILQIQHFRFKFRLSIVHFGPLFSF 53
>AC006655-1|AAF39875.1| 391|Caenorhabditis elegans Serpentine
receptor, class w protein6 protein.
Length = 391
Score = 28.3 bits (60), Expect = 1.9
Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Frame = -3
Query: 216 TFRFLIYIYKFFVDFSYLLLDIFKT*IHCFGFSFFQTLSP--RHLENISL*PFFLV---F 52
+F + I F +F+Y L +F FGF FQTL HL +I+L FL+ F
Sbjct: 277 SFVIAMAISTFASEFAYGL--VFTVEHFIFGFEMFQTLKTLFMHLNSITL--LFLMASSF 332
Query: 51 SHCILL*FSIFQQSRD 4
SH I + F + Q RD
Sbjct: 333 SH-IFVCFFMSSQYRD 347
>U64845-5|AAC48027.1| 581|Caenorhabditis elegans Hypothetical
protein F45F2.6 protein.
Length = 581
Score = 27.9 bits (59), Expect = 2.4
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -3
Query: 255 VLWCFKIFLIFSITFRFLIYIYKFFVDFSYLLLDI 151
VLW +IFL F R IY+ K+ + F + L +
Sbjct: 160 VLWGCEIFLCFFTETRHNIYVVKYILAFLFTYLQM 194
>U00049-3|AAC47059.1| 339|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 7 protein.
Length = 339
Score = 27.5 bits (58), Expect = 3.2
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = -3
Query: 267 FLLVVLWCFKIFLIFSITFRFLIYIYKFFVDFSYLLLDI 151
F++V + F F FR+ + +F VDF +++ D+
Sbjct: 241 FIIVAFFFQAAFQSFYAFFRYTDWYPRFLVDFQFIIYDV 279
>Z83123-7|CAB05612.2| 332|Caenorhabditis elegans Hypothetical
protein T04A11.9 protein.
Length = 332
Score = 27.1 bits (57), Expect = 4.3
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -3
Query: 321 FQFLQSFY*VPLLILAVSFLLVVLWCFKIFLIFSI 217
FQF + +P+L+ V F+ ++ CF IF I +
Sbjct: 22 FQF--DIFTIPVLLAIVPFIYIIPTCFVIFRIIQV 54
>AF130443-1|AAD28468.1| 956|Caenorhabditis elegans EAG K+ channel
EGL-2 protein.
Length = 956
Score = 27.1 bits (57), Expect = 4.3
Identities = 10/27 (37%), Positives = 19/27 (70%)
Frame = +3
Query: 249 KEPPVKKKQPVSKEELNKTTEEIEKMD 329
K PP+ K+Q V ++ L++T+ ++K D
Sbjct: 786 KRPPLMKRQTVDEDALSRTSWGMDKKD 812
>AF036695-1|AAB88348.2| 956|Caenorhabditis elegans Egg laying
defective protein 2 protein.
Length = 956
Score = 27.1 bits (57), Expect = 4.3
Identities = 10/27 (37%), Positives = 19/27 (70%)
Frame = +3
Query: 249 KEPPVKKKQPVSKEELNKTTEEIEKMD 329
K PP+ K+Q V ++ L++T+ ++K D
Sbjct: 786 KRPPLMKRQTVDEDALSRTSWGMDKKD 812
>Z75527-8|CAA99778.2| 316|Caenorhabditis elegans Hypothetical
protein C15C8.6 protein.
Length = 316
Score = 26.6 bits (56), Expect = 5.7
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = -3
Query: 309 QSFY*VPLLILAVSFLLVVLWCFKIFLIFSITF-RFLIYIYKFFVDFSYLLLDIFKT*IH 133
Q ++ P++I +FLL++ CF L+ I F R L + + I+ I
Sbjct: 82 QPYFVNPVMINVPAFLLILSQCFAFVLVIIIGFYRSLRIVSSKAGKLIFPDKVIYVIIIG 141
Query: 132 CFGFSFFQTLS 100
F FSFF T++
Sbjct: 142 VFCFSFFFTVN 152
>Z70266-1|CAB61045.1| 364|Caenorhabditis elegans Hypothetical
protein C40C9.1 protein.
Length = 364
Score = 26.6 bits (56), Expect = 5.7
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = -3
Query: 252 LWCFKIFLIFSITFRFLIY--IYKFFVDFSYLLLDIFKT*IHCFGFSFFQTLSPRHLENI 79
L+C IF +F + +++ I + F L F+ +H GF+ Q ++P HL +
Sbjct: 111 LFCM-IFALFGVPMGLIMFQSIGERVNTFIAYSLHKFRDSLHQQGFTCLQEVTPTHLLMV 169
Query: 78 SL*PFFLV 55
SL F+V
Sbjct: 170 SLTIGFMV 177
>AF083646-1|AAC32857.1| 364|Caenorhabditis elegans putative
potassium channel subunitn2P20 protein.
Length = 364
Score = 26.6 bits (56), Expect = 5.7
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = -3
Query: 252 LWCFKIFLIFSITFRFLIY--IYKFFVDFSYLLLDIFKT*IHCFGFSFFQTLSPRHLENI 79
L+C IF +F + +++ I + F L F+ +H GF+ Q ++P HL +
Sbjct: 111 LFCM-IFALFGVPMGLIMFQSIGERVNTFIAYSLHKFRDSLHQQGFTCLQEVTPTHLLMV 169
Query: 78 SL*PFFLV 55
SL F+V
Sbjct: 170 SLTIGFMV 177
>Z81062-3|CAB02948.2| 325|Caenorhabditis elegans Hypothetical
protein F15A4.4 protein.
Length = 325
Score = 26.2 bits (55), Expect = 7.5
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Frame = -3
Query: 351 PDLTLSIDPFFQFLQSFY*VPLLILAVSFLLVVLW--CFK--IFLIFS-ITFRFL 202
PD S + F+ FY + L++AVS L+ V C K ++L+F F FL
Sbjct: 220 PDRIKSAEKSLCFVSLFYSIAFLVVAVSQLIFVFCEVCLKNRLYLLFQFFAFDFL 274
>Z82265-3|CAB05173.1| 471|Caenorhabditis elegans Hypothetical
protein F02H6.5 protein.
Length = 471
Score = 25.8 bits (54), Expect = 9.9
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +2
Query: 11 LCWKILNYNKIQWEKTRKK 67
LCW I+N+ I +K++KK
Sbjct: 208 LCWDIINHGAIGNQKSKKK 226
>Z82057-2|CAD89759.1| 561|Caenorhabditis elegans Hypothetical
protein T26H8.4 protein.
Length = 561
Score = 25.8 bits (54), Expect = 9.9
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = -1
Query: 188 NSLSISATFCLIFLRPKFTALALVFFKLL 102
NSLSIS+TF IF+ +F+ ++ F LL
Sbjct: 61 NSLSISSTFPFIFM-TEFSTISTSFLILL 88
>Z49910-7|CAA90124.4| 384|Caenorhabditis elegans Hypothetical
protein F44G4.1 protein.
Length = 384
Score = 25.8 bits (54), Expect = 9.9
Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 3/28 (10%)
Frame = +3
Query: 252 EPPVKKKQPVSKE---ELNKTTEEIEKM 326
EPP KKK+ V KE EL T E+++++
Sbjct: 48 EPPKKKKKVVKKEIKQELELTDEKLQEL 75
>AF098997-9|AAC68720.1| 325|Caenorhabditis elegans Serpentine
receptor, class i protein42 protein.
Length = 325
Score = 25.8 bits (54), Expect = 9.9
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = -3
Query: 228 IFSITFRFLIYIYKFFVDFSYLLLDIFKT 142
I+ ITF ++I I+ F ++ + +LL I+K+
Sbjct: 7 IWYITFFYVIGIFSFVLNIAVILLVIYKS 35
>AF016450-6|AAB65982.1| 311|Caenorhabditis elegans Serpentine
receptor, class t protein67 protein.
Length = 311
Score = 25.8 bits (54), Expect = 9.9
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Frame = -3
Query: 285 LILAVSFLLVVLWCFKIFLIFSITFRFLI----YIYKFFVDFSYL--LLDIFKT*IHCFG 124
L++ + + +V W +F+ IT + + Y F V ++ L +L+IF T + C
Sbjct: 132 LVVKMIVVCIVCWVLFVFIAGCITQNLMFSPPSWGYDFSVPYAELFDMLEIFLT-VPCLA 190
Query: 123 FSFFQTLS 100
S+F L+
Sbjct: 191 ISYFAYLT 198
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,794,938
Number of Sequences: 27780
Number of extensions: 87042
Number of successful extensions: 482
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 469
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 482
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 535612900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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