Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20796
(558 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY119596-1|AAM50250.1| 517|Drosophila melanogaster LD19266p pro... 123 1e-28
AF204777-1|AAF22653.1| 517|Drosophila melanogaster CED-6 protein. 123 1e-28
AE013599-865|AAM71067.1| 517|Drosophila melanogaster CG11804-PC... 123 1e-28
AE013599-864|AAF58937.1| 517|Drosophila melanogaster CG11804-PB... 123 1e-28
AE013599-863|AAG22292.1| 517|Drosophila melanogaster CG11804-PA... 123 1e-28
BT025846-1|ABF85746.1| 1325|Drosophila melanogaster IP14385p pro... 38 0.007
AY060371-1|AAL25410.1| 503|Drosophila melanogaster LD23637p pro... 38 0.007
AE014297-3670|AAF56367.1| 863|Drosophila melanogaster CG11168-P... 38 0.007
AE014297-3323|AAF56132.3| 1348|Drosophila melanogaster CG4393-PA... 38 0.007
M27815-1|AAA28730.1| 556|Drosophila melanogaster protein ( D.me... 32 0.60
AE014134-1640|AAN10693.1| 515|Drosophila melanogaster CG3779-PB... 32 0.60
AE014134-1639|AAF52776.1| 556|Drosophila melanogaster CG3779-PA... 32 0.60
AY928072-1|AAX78396.1| 1319|Drosophila melanogaster hyperpolariz... 29 4.3
AY928069-1|AAX78393.1| 1282|Drosophila melanogaster hyperpolariz... 29 4.3
AF124300-1|AAD42059.1| 945|Drosophila melanogaster putative vol... 29 4.3
AE013599-1867|ABC66058.1| 1290|Drosophila melanogaster CG8585-PB... 29 4.3
AE013599-1866|ABC66057.1| 1327|Drosophila melanogaster CG8585-PE... 29 4.3
BT022692-1|AAY55108.1| 471|Drosophila melanogaster IP12304p pro... 29 5.6
AE014298-1612|AAF48040.1| 458|Drosophila melanogaster CG15196-P... 29 5.6
AE013599-318|AAF59281.2| 1299|Drosophila melanogaster CG11084-PC... 29 5.6
AE013599-313|AAF59284.2| 1029|Drosophila melanogaster CG11084-PB... 29 5.6
AE013599-308|AAM68908.1| 963|Drosophila melanogaster CG11084-PA... 29 5.6
AJ243710-1|CAB57345.3| 1299|Drosophila melanogaster prickle sple... 28 7.4
AJ243709-1|CAB99211.2| 1029|Drosophila melanogaster prickle pkM ... 28 7.4
AJ243708-1|CAB57344.3| 963|Drosophila melanogaster prickle pk i... 28 7.4
AE014297-2807|AAS65182.1| 197|Drosophila melanogaster CG33488-P... 28 7.4
AE014134-670|AAF51066.3| 1802|Drosophila melanogaster CG31772-PA... 28 7.4
AY094788-1|AAM11141.1| 1521|Drosophila melanogaster LD15253p pro... 28 9.8
AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends l... 28 9.8
AF188205-1|AAF13218.1| 5533|Drosophila melanogaster Spen RNP mot... 28 9.8
AF184612-1|AAF26299.1| 5476|Drosophila melanogaster split ends p... 28 9.8
AE014134-58|AAN10511.1| 5476|Drosophila melanogaster CG18497-PC,... 28 9.8
AE014134-57|AAF51534.2| 5533|Drosophila melanogaster CG18497-PB,... 28 9.8
AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,... 28 9.8
>AY119596-1|AAM50250.1| 517|Drosophila melanogaster LD19266p
protein.
Length = 517
Score = 123 bits (297), Expect = 1e-28
Identities = 56/97 (57%), Positives = 69/97 (71%)
Frame = +2
Query: 266 GKGKGNGAPNGRNWIHAPDSLVKGHVAYLVKFLGCTQVDQPKGIEVVKDAIKKLQFTQQL 445
G K RNW+H P+ L+ GH YLVKF G VDQPKGIEVVK+AI+KLQF QQ+
Sbjct: 62 GDAKSEAKNGKRNWLHTPEQLISGHAVYLVKFFGNLSVDQPKGIEVVKEAIRKLQFAQQM 121
Query: 446 KKSEAKDGAKCKKVEITXSVGGVAIQEPRSNNIMYQF 556
KK+E K KK+EIT S+ GVAIQEPR++ I++QF
Sbjct: 122 KKAETGTQEKFKKLEITISIKGVAIQEPRTHKILHQF 158
>AF204777-1|AAF22653.1| 517|Drosophila melanogaster CED-6 protein.
Length = 517
Score = 123 bits (297), Expect = 1e-28
Identities = 56/97 (57%), Positives = 69/97 (71%)
Frame = +2
Query: 266 GKGKGNGAPNGRNWIHAPDSLVKGHVAYLVKFLGCTQVDQPKGIEVVKDAIKKLQFTQQL 445
G K RNW+H P+ L+ GH YLVKF G VDQPKGIEVVK+AI+KLQF QQ+
Sbjct: 62 GDAKSEAKNGKRNWLHTPEQLISGHAVYLVKFFGNLSVDQPKGIEVVKEAIRKLQFAQQM 121
Query: 446 KKSEAKDGAKCKKVEITXSVGGVAIQEPRSNNIMYQF 556
KK+E K KK+EIT S+ GVAIQEPR++ I++QF
Sbjct: 122 KKAETGTQEKFKKLEITISIKGVAIQEPRTHKILHQF 158
>AE013599-865|AAM71067.1| 517|Drosophila melanogaster CG11804-PC,
isoform C protein.
Length = 517
Score = 123 bits (297), Expect = 1e-28
Identities = 56/97 (57%), Positives = 69/97 (71%)
Frame = +2
Query: 266 GKGKGNGAPNGRNWIHAPDSLVKGHVAYLVKFLGCTQVDQPKGIEVVKDAIKKLQFTQQL 445
G K RNW+H P+ L+ GH YLVKF G VDQPKGIEVVK+AI+KLQF QQ+
Sbjct: 62 GDAKSEAKNGKRNWLHTPEQLISGHAVYLVKFFGNLSVDQPKGIEVVKEAIRKLQFAQQM 121
Query: 446 KKSEAKDGAKCKKVEITXSVGGVAIQEPRSNNIMYQF 556
KK+E K KK+EIT S+ GVAIQEPR++ I++QF
Sbjct: 122 KKAETGTQEKFKKLEITISIKGVAIQEPRTHKILHQF 158
>AE013599-864|AAF58937.1| 517|Drosophila melanogaster CG11804-PB,
isoform B protein.
Length = 517
Score = 123 bits (297), Expect = 1e-28
Identities = 56/97 (57%), Positives = 69/97 (71%)
Frame = +2
Query: 266 GKGKGNGAPNGRNWIHAPDSLVKGHVAYLVKFLGCTQVDQPKGIEVVKDAIKKLQFTQQL 445
G K RNW+H P+ L+ GH YLVKF G VDQPKGIEVVK+AI+KLQF QQ+
Sbjct: 62 GDAKSEAKNGKRNWLHTPEQLISGHAVYLVKFFGNLSVDQPKGIEVVKEAIRKLQFAQQM 121
Query: 446 KKSEAKDGAKCKKVEITXSVGGVAIQEPRSNNIMYQF 556
KK+E K KK+EIT S+ GVAIQEPR++ I++QF
Sbjct: 122 KKAETGTQEKFKKLEITISIKGVAIQEPRTHKILHQF 158
>AE013599-863|AAG22292.1| 517|Drosophila melanogaster CG11804-PA,
isoform A protein.
Length = 517
Score = 123 bits (297), Expect = 1e-28
Identities = 56/97 (57%), Positives = 69/97 (71%)
Frame = +2
Query: 266 GKGKGNGAPNGRNWIHAPDSLVKGHVAYLVKFLGCTQVDQPKGIEVVKDAIKKLQFTQQL 445
G K RNW+H P+ L+ GH YLVKF G VDQPKGIEVVK+AI+KLQF QQ+
Sbjct: 62 GDAKSEAKNGKRNWLHTPEQLISGHAVYLVKFFGNLSVDQPKGIEVVKEAIRKLQFAQQM 121
Query: 446 KKSEAKDGAKCKKVEITXSVGGVAIQEPRSNNIMYQF 556
KK+E K KK+EIT S+ GVAIQEPR++ I++QF
Sbjct: 122 KKAETGTQEKFKKLEITISIKGVAIQEPRTHKILHQF 158
>BT025846-1|ABF85746.1| 1325|Drosophila melanogaster IP14385p protein.
Length = 1325
Score = 38.3 bits (85), Expect = 0.007
Identities = 16/42 (38%), Positives = 27/42 (64%)
Frame = +2
Query: 305 WIHAPDSLVKGHVAYLVKFLGCTQVDQPKGIEVVKDAIKKLQ 430
W H+ +L+ H+ Y V++LG T V + +G E K +I+KL+
Sbjct: 1163 WRHSAQTLLNEHINYEVQYLGSTVVKELRGTESTKKSIQKLK 1204
>AY060371-1|AAL25410.1| 503|Drosophila melanogaster LD23637p
protein.
Length = 503
Score = 38.3 bits (85), Expect = 0.007
Identities = 15/51 (29%), Positives = 30/51 (58%)
Frame = +2
Query: 302 NWIHAPDSLVKGHVAYLVKFLGCTQVDQPKGIEVVKDAIKKLQFTQQLKKS 454
NW H+P + + G + Y + +LG T + + +G + +I+KL+ + LK +
Sbjct: 329 NWCHSPYTFIYGEIRYSLFYLGSTVIRKLQGTLSTRKSIQKLKIDENLKSA 379
>AE014297-3670|AAF56367.1| 863|Drosophila melanogaster CG11168-PA
protein.
Length = 863
Score = 38.3 bits (85), Expect = 0.007
Identities = 15/51 (29%), Positives = 30/51 (58%)
Frame = +2
Query: 302 NWIHAPDSLVKGHVAYLVKFLGCTQVDQPKGIEVVKDAIKKLQFTQQLKKS 454
NW H+P + + G + Y + +LG T + + +G + +I+KL+ + LK +
Sbjct: 689 NWCHSPYTFIYGEIRYSLFYLGSTVIRKLQGTLSTRKSIQKLKIDENLKSA 739
>AE014297-3323|AAF56132.3| 1348|Drosophila melanogaster CG4393-PA
protein.
Length = 1348
Score = 38.3 bits (85), Expect = 0.007
Identities = 16/42 (38%), Positives = 27/42 (64%)
Frame = +2
Query: 305 WIHAPDSLVKGHVAYLVKFLGCTQVDQPKGIEVVKDAIKKLQ 430
W H+ +L+ H+ Y V++LG T V + +G E K +I+KL+
Sbjct: 1186 WRHSAQTLLNEHINYEVQYLGSTVVKELRGTESTKKSIQKLK 1227
>M27815-1|AAA28730.1| 556|Drosophila melanogaster protein (
D.melanogaster numbmRNA, complete cds. ).
Length = 556
Score = 31.9 bits (69), Expect = 0.60
Identities = 12/42 (28%), Positives = 27/42 (64%)
Frame = +2
Query: 305 WIHAPDSLVKGHVAYLVKFLGCTQVDQPKGIEVVKDAIKKLQ 430
W +++ ++ VK+LGC +V + +G++V ++A+K L+
Sbjct: 69 WQADEEAVRSATCSFSVKYLGCVEVFESRGMQVCEEALKVLR 110
>AE014134-1640|AAN10693.1| 515|Drosophila melanogaster CG3779-PB,
isoform B protein.
Length = 515
Score = 31.9 bits (69), Expect = 0.60
Identities = 12/42 (28%), Positives = 27/42 (64%)
Frame = +2
Query: 305 WIHAPDSLVKGHVAYLVKFLGCTQVDQPKGIEVVKDAIKKLQ 430
W +++ ++ VK+LGC +V + +G++V ++A+K L+
Sbjct: 28 WQADEEAVRSATCSFSVKYLGCVEVFESRGMQVCEEALKVLR 69
>AE014134-1639|AAF52776.1| 556|Drosophila melanogaster CG3779-PA,
isoform A protein.
Length = 556
Score = 31.9 bits (69), Expect = 0.60
Identities = 12/42 (28%), Positives = 27/42 (64%)
Frame = +2
Query: 305 WIHAPDSLVKGHVAYLVKFLGCTQVDQPKGIEVVKDAIKKLQ 430
W +++ ++ VK+LGC +V + +G++V ++A+K L+
Sbjct: 69 WQADEEAVRSATCSFSVKYLGCVEVFESRGMQVCEEALKVLR 110
>AY928072-1|AAX78396.1| 1319|Drosophila melanogaster
hyperpolarization-activated ionchannel variant
DMIH-A1B2C2 protein.
Length = 1319
Score = 29.1 bits (62), Expect = 4.3
Identities = 22/76 (28%), Positives = 33/76 (43%)
Frame = -1
Query: 417 IASLTTSMPFGWSTWVQPRNLTR*ATWPLTSESGAWIQLRPFGAPFPLPLPCQKTGSTFW 238
+AS S P +S + AT P ++ +QL FG+ P P P + T ++
Sbjct: 535 VASAGVSYPHPYSYPYHYAHHASSATAPANLKAS--LQLHSFGSHHPCPYPARPTSTS-- 590
Query: 237 S*FCRFSIRSRHIQSH 190
C S RHI+ H
Sbjct: 591 ---CTNSFNRRHIRRH 603
>AY928069-1|AAX78393.1| 1282|Drosophila melanogaster
hyperpolarization-activated ionchannel variant
DMIH-A1B1C1 protein.
Length = 1282
Score = 29.1 bits (62), Expect = 4.3
Identities = 22/76 (28%), Positives = 33/76 (43%)
Frame = -1
Query: 417 IASLTTSMPFGWSTWVQPRNLTR*ATWPLTSESGAWIQLRPFGAPFPLPLPCQKTGSTFW 238
+AS S P +S + AT P ++ +QL FG+ P P P + T ++
Sbjct: 535 VASAGVSYPHPYSYPYHYAHHASSATAPANLKAS--LQLHSFGSHHPCPYPARPTSTS-- 590
Query: 237 S*FCRFSIRSRHIQSH 190
C S RHI+ H
Sbjct: 591 ---CTNSFNRRHIRRH 603
>AF124300-1|AAD42059.1| 945|Drosophila melanogaster putative
voltage- and cyclic nucleotide-gated ion channel
protein.
Length = 945
Score = 29.1 bits (62), Expect = 4.3
Identities = 22/76 (28%), Positives = 33/76 (43%)
Frame = -1
Query: 417 IASLTTSMPFGWSTWVQPRNLTR*ATWPLTSESGAWIQLRPFGAPFPLPLPCQKTGSTFW 238
+AS S P +S + AT P ++ +QL FG+ P P P + T ++
Sbjct: 193 VASAGVSYPHPYSYPYHYAHHASSATAPANLKAS--LQLHSFGSHHPCPYPARPTSTS-- 248
Query: 237 S*FCRFSIRSRHIQSH 190
C S RHI+ H
Sbjct: 249 ---CTNSFNRRHIRRH 261
>AE013599-1867|ABC66058.1| 1290|Drosophila melanogaster CG8585-PB,
isoform B protein.
Length = 1290
Score = 29.1 bits (62), Expect = 4.3
Identities = 22/76 (28%), Positives = 33/76 (43%)
Frame = -1
Query: 417 IASLTTSMPFGWSTWVQPRNLTR*ATWPLTSESGAWIQLRPFGAPFPLPLPCQKTGSTFW 238
+AS S P +S + AT P ++ +QL FG+ P P P + T ++
Sbjct: 543 VASAGVSYPHPYSYPYHYAHHASSATAPANLKAS--LQLHSFGSHHPCPYPARPTSTS-- 598
Query: 237 S*FCRFSIRSRHIQSH 190
C S RHI+ H
Sbjct: 599 ---CTNSFNRRHIRRH 611
>AE013599-1866|ABC66057.1| 1327|Drosophila melanogaster CG8585-PE,
isoform E protein.
Length = 1327
Score = 29.1 bits (62), Expect = 4.3
Identities = 22/76 (28%), Positives = 33/76 (43%)
Frame = -1
Query: 417 IASLTTSMPFGWSTWVQPRNLTR*ATWPLTSESGAWIQLRPFGAPFPLPLPCQKTGSTFW 238
+AS S P +S + AT P ++ +QL FG+ P P P + T ++
Sbjct: 543 VASAGVSYPHPYSYPYHYAHHASSATAPANLKAS--LQLHSFGSHHPCPYPARPTSTS-- 598
Query: 237 S*FCRFSIRSRHIQSH 190
C S RHI+ H
Sbjct: 599 ---CTNSFNRRHIRRH 611
>BT022692-1|AAY55108.1| 471|Drosophila melanogaster IP12304p
protein.
Length = 471
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +2
Query: 338 HVAYLVKFLGCTQVDQPKGIEVVKDAIKKLQFTQQLKKSEAK 463
H A +K L TQ D+ ++V DA++ + ++KSEA+
Sbjct: 177 HTAIPLKILQMTQRDRMMSSQLVIDAMRTRNMERMVRKSEAR 218
>AE014298-1612|AAF48040.1| 458|Drosophila melanogaster CG15196-PA
protein.
Length = 458
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +2
Query: 338 HVAYLVKFLGCTQVDQPKGIEVVKDAIKKLQFTQQLKKSEAK 463
H A +K L TQ D+ ++V DA++ + ++KSEA+
Sbjct: 164 HTAIPLKILQMTQRDRMMSSQLVIDAMRTRNMERMVRKSEAR 205
>AE013599-318|AAF59281.2| 1299|Drosophila melanogaster CG11084-PC,
isoform C protein.
Length = 1299
Score = 28.7 bits (61), Expect = 5.6
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 460 ERWREMQESRNNDXCGRCCHTGTTFEQY 543
ER RE +ES +D C C + ++ E Y
Sbjct: 1225 EREREREESEESDVCSTCSSSSSSSEDY 1252
>AE013599-313|AAF59284.2| 1029|Drosophila melanogaster CG11084-PB,
isoform B protein.
Length = 1029
Score = 28.7 bits (61), Expect = 5.6
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 460 ERWREMQESRNNDXCGRCCHTGTTFEQY 543
ER RE +ES +D C C + ++ E Y
Sbjct: 955 EREREREESEESDVCSTCSSSSSSSEDY 982
>AE013599-308|AAM68908.1| 963|Drosophila melanogaster CG11084-PA,
isoform A protein.
Length = 963
Score = 28.7 bits (61), Expect = 5.6
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 460 ERWREMQESRNNDXCGRCCHTGTTFEQY 543
ER RE +ES +D C C + ++ E Y
Sbjct: 889 EREREREESEESDVCSTCSSSSSSSEDY 916
>AJ243710-1|CAB57345.3| 1299|Drosophila melanogaster prickle sple
isoform protein.
Length = 1299
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 460 ERWREMQESRNNDXCGRCCHTGTTFEQY 543
ER RE +ES +D C C + ++ E Y
Sbjct: 1225 ERERERKESEESDVCSTCSSSSSSSEDY 1252
>AJ243709-1|CAB99211.2| 1029|Drosophila melanogaster prickle pkM
isoform protein.
Length = 1029
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 460 ERWREMQESRNNDXCGRCCHTGTTFEQY 543
ER RE +ES +D C C + ++ E Y
Sbjct: 955 ERERERKESEESDVCSTCSSSSSSSEDY 982
>AJ243708-1|CAB57344.3| 963|Drosophila melanogaster prickle pk
isoform protein.
Length = 963
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 460 ERWREMQESRNNDXCGRCCHTGTTFEQY 543
ER RE +ES +D C C + ++ E Y
Sbjct: 889 ERERERKESEESDVCSTCSSSSSSSEDY 916
>AE014297-2807|AAS65182.1| 197|Drosophila melanogaster CG33488-PA,
isoform A protein.
Length = 197
Score = 28.3 bits (60), Expect = 7.4
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = -2
Query: 287 PRSLCPYPARRQGRH 243
PR++ +PARRQGRH
Sbjct: 99 PRAVASHPARRQGRH 113
>AE014134-670|AAF51066.3| 1802|Drosophila melanogaster CG31772-PA
protein.
Length = 1802
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +2
Query: 260 WQGKGKGNGAPNGRNWIHAPDSLVKGHVAYLVK 358
W+ G+ GAPN + W+ SL + Y K
Sbjct: 1580 WRQSGQAKGAPNSKKWVRRWFSLRPDNCLYYYK 1612
>AY094788-1|AAM11141.1| 1521|Drosophila melanogaster LD15253p
protein.
Length = 1521
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = -1
Query: 471 APSFASDFFSCCVNCSFLIASLTTSMPFGWST 376
APS AS SC VN S + + +TSMP G S+
Sbjct: 417 APSLASAVVSCNVNASGTVPA-STSMPSGVSS 447
>AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends long
isoform protein.
Length = 5554
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = -1
Query: 471 APSFASDFFSCCVNCSFLIASLTTSMPFGWST 376
APS AS SC VN S + + +TSMP G S+
Sbjct: 895 APSLASAVVSCNVNASGTVPA-STSMPSGVSS 925
>AF188205-1|AAF13218.1| 5533|Drosophila melanogaster Spen RNP motif
protein long isoformprotein.
Length = 5533
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = -1
Query: 471 APSFASDFFSCCVNCSFLIASLTTSMPFGWST 376
APS AS SC VN S + + +TSMP G S+
Sbjct: 901 APSLASAVVSCNVNASGTVPA-STSMPSGVSS 931
>AF184612-1|AAF26299.1| 5476|Drosophila melanogaster split ends
protein.
Length = 5476
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = -1
Query: 471 APSFASDFFSCCVNCSFLIASLTTSMPFGWST 376
APS AS SC VN S + + +TSMP G S+
Sbjct: 844 APSLASAVVSCNVNASGTVPA-STSMPSGVSS 874
>AE014134-58|AAN10511.1| 5476|Drosophila melanogaster CG18497-PC,
isoform C protein.
Length = 5476
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = -1
Query: 471 APSFASDFFSCCVNCSFLIASLTTSMPFGWST 376
APS AS SC VN S + + +TSMP G S+
Sbjct: 844 APSLASAVVSCNVNASGTVPA-STSMPSGVSS 874
>AE014134-57|AAF51534.2| 5533|Drosophila melanogaster CG18497-PB,
isoform B protein.
Length = 5533
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = -1
Query: 471 APSFASDFFSCCVNCSFLIASLTTSMPFGWST 376
APS AS SC VN S + + +TSMP G S+
Sbjct: 901 APSLASAVVSCNVNASGTVPA-STSMPSGVSS 931
>AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,
isoform A protein.
Length = 5560
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = -1
Query: 471 APSFASDFFSCCVNCSFLIASLTTSMPFGWST 376
APS AS SC VN S + + +TSMP G S+
Sbjct: 901 APSLASAVVSCNVNASGTVPA-STSMPSGVSS 931
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,327,313
Number of Sequences: 53049
Number of extensions: 465438
Number of successful extensions: 1749
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1749
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2151905496
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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