Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20796
         (558 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   2.1  
DQ325077-1|ABD14091.1|  181|Apis mellifera complementary sex det...    22   3.7  
DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    22   3.7  
DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex det...    21   8.4  
DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex det...    21   8.4  
DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex det...    21   8.4  
DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex det...    21   8.4  
DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex det...    21   8.4  
DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex det...    21   8.4  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    21   8.4  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 19/78 (24%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
 Frame = +1

Query: 271  GQRERGTERPQLDPRS-GLARQGPRR--LSR*VPRL-HPSRPAERHRGGQRCNQE-TTVH 435
            G+ + G++R    P    ++R G R    +R   +L   SR  E H GGQ+ +++  T+ 
Sbjct: 1385 GRNDDGSDRLTSPPTPLSISRAGSRDEDSTRDSTKLDRSSREREVHNGGQQEDRDRKTLT 1444

Query: 436  TATEEVRSERWREMQESR 489
            +A ++ + ++ ++ Q+ +
Sbjct: 1445 SAPQQPQQQQQQQQQQQQ 1462


>DQ325077-1|ABD14091.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +1

Query: 295 RPQLDPRSGLARQ 333
           RP L+PR GLA Q
Sbjct: 169 RPPLNPRFGLAHQ 181


>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +1

Query: 295 RPQLDPRSGLARQ 333
           RP L+PR GLA Q
Sbjct: 179 RPPLNPRFGLAHQ 191


>DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +1

Query: 490 NNDXCGRCCHTGTTFEQYNVPVP 558
           NN+   + C+     EQ  VPVP
Sbjct: 95  NNNNYKQLCYNINYIEQIPVPVP 117


>DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +1

Query: 490 NNDXCGRCCHTGTTFEQYNVPVP 558
           NN+   + C+     EQ  VPVP
Sbjct: 95  NNNNYKQLCYNINYIEQIPVPVP 117


>DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +1

Query: 490 NNDXCGRCCHTGTTFEQYNVPVP 558
           NN+   + C+     EQ  VPVP
Sbjct: 95  NNNNYKQLCYNINYIEQIPVPVP 117


>DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +1

Query: 490 NNDXCGRCCHTGTTFEQYNVPVP 558
           NN+   + C+     EQ  VPVP
Sbjct: 95  NNNNYKQLCYNINYIEQIPVPVP 117


>DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +1

Query: 490 NNDXCGRCCHTGTTFEQYNVPVP 558
           NN+   + C+     EQ  VPVP
Sbjct: 95  NNNNYKQLCYNINHIEQIPVPVP 117


>DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +1

Query: 490 NNDXCGRCCHTGTTFEQYNVPVP 558
           NN+   + C+     EQ  VPVP
Sbjct: 95  NNNNYKQLCYNINYIEQIPVPVP 117


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 6/16 (37%), Positives = 14/16 (87%)
 Frame = -2

Query: 527 VPVWQHLPQXSLFRLS 480
           VP++++LP+ +L ++S
Sbjct: 218 VPIFKNLPEETLIKIS 233


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,932
Number of Sequences: 438
Number of extensions: 2840
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16072521
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)