Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20794
(699 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 105 1e-21
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 103 6e-21
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 98 2e-19
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 84 4e-15
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 83 6e-15
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 83 6e-15
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 83 6e-15
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 82 1e-14
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 81 3e-14
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 80 6e-14
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 79 1e-13
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 79 1e-13
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 78 2e-13
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 78 2e-13
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 77 3e-13
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 77 3e-13
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 77 3e-13
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 77 3e-13
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 77 4e-13
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 77 6e-13
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 75 2e-12
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 74 4e-12
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 74 4e-12
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 72 2e-11
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 70 5e-11
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 69 1e-10
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 69 1e-10
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 69 1e-10
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 67 3e-10
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 66 6e-10
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 66 1e-09
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 66 1e-09
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 66 1e-09
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 66 1e-09
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 64 2e-09
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 64 3e-09
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 61 2e-08
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 60 5e-08
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 60 5e-08
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 60 7e-08
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 59 9e-08
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 59 1e-07
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 56 1e-06
UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1; Ha... 55 2e-06
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 54 3e-06
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 53 6e-06
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 53 8e-06
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 52 1e-05
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 52 2e-05
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 52 2e-05
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 51 3e-05
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 50 5e-05
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 50 5e-05
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 50 7e-05
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 49 1e-04
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 49 1e-04
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 49 1e-04
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 49 1e-04
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 48 2e-04
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 48 2e-04
UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6; Di... 48 2e-04
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 48 3e-04
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 48 3e-04
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 47 4e-04
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 47 4e-04
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 47 4e-04
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 47 4e-04
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 46 7e-04
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 46 9e-04
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 46 9e-04
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 46 0.001
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 46 0.001
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 46 0.001
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 46 0.001
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 45 0.002
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 45 0.002
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 45 0.002
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 44 0.004
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 44 0.004
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 44 0.005
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 43 0.006
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 43 0.008
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 43 0.008
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 42 0.015
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 42 0.019
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 41 0.025
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 41 0.025
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 41 0.025
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 41 0.025
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 41 0.034
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 40 0.059
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 40 0.059
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 40 0.078
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 39 0.10
UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1; Pach... 38 0.18
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 38 0.24
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 38 0.31
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 37 0.55
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 36 0.72
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 36 1.3
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 36 1.3
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 35 1.7
UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eu... 35 1.7
UniRef50_Q2Y5N3 Cluster: Integral membrane proteins containing u... 35 2.2
UniRef50_Q5ABE2 Cluster: Putative uncharacterized protein CLN3; ... 33 6.7
UniRef50_Q8II85 Cluster: Putative uncharacterized protein; n=2; ... 33 8.9
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 105 bits (252), Expect = 1e-21
Identities = 60/111 (54%), Positives = 63/111 (56%)
Frame = +2
Query: 257 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 436
FSLHLAGISS SFDQ+PLFV AVGITAF AGAIT
Sbjct: 145 FSLHLAGISSILGAINFITTIINMRMNNLSFDQMPLFVWAVGITAFLLLLSLPVLAGAIT 204
Query: 437 ILLTDRNLNTSFFDPAGGGDPILYNIXXXXXXXXXXXXXXXQDLV*FLILF 589
+LLTDRNLNTSFFDPAGGGDPILY QDLV F +LF
Sbjct: 205 MLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPKLMFSFSQDLVSFHMLF 255
Score = 90.2 bits (214), Expect = 4e-17
Identities = 45/69 (65%), Positives = 49/69 (71%)
Frame = +3
Query: 54 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 233
N LVPL+LGAPD+AFPR+NN+ F IVENGAGTG TVYPPLSSNIAH
Sbjct: 77 NWLVPLMLGAPDMAFPRMNNMSFWLLPPSLTLLISSSIVENGAGTGWTVYPPLSSNIAHG 136
Query: 234 GRSVDLAFF 260
G SVDLA F
Sbjct: 137 GSSVDLAIF 145
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 103 bits (246), Expect = 6e-21
Identities = 47/69 (68%), Positives = 55/69 (79%)
Frame = -3
Query: 247 STDLPLCAILDESGG*TVHPVPAPFSTILLEINNIREGGRSQNLILFIRGNAISGAPSIR 68
STD P CAI SGG TVHPVP P STI L + ++EGG +QNL+LFIRGNA+SGAP++
Sbjct: 91 STDAPACAIPLASGGYTVHPVPTPLSTIPLNKSKVKEGGSNQNLMLFIRGNAMSGAPNMS 150
Query: 67 GTNQFPNPP 41
GTNQFPNPP
Sbjct: 151 GTNQFPNPP 159
Score = 83.8 bits (198), Expect = 4e-15
Identities = 45/84 (53%), Positives = 54/84 (64%)
Frame = -1
Query: 507 YKIGSPPPAGSKNDVFKFRSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKGN*SNDILFNR 328
+ IGSPPPAGSK +VFKFRSV +IVIAPA TGS++N+K AV T TN G S I +R
Sbjct: 4 WSIGSPPPAGSKKEVFKFRSVKSIVIAPASTGSESNSKMAVSNTDQTNSGMRSMVIPADR 63
Query: 327 XXXXXXXXXXXXXIDEIPAKCSEK 256
I+E PAKC+EK
Sbjct: 64 MLITVVMKFTAPKIEETPAKCNEK 87
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 98.3 bits (234), Expect = 2e-19
Identities = 51/84 (60%), Positives = 54/84 (64%)
Frame = +2
Query: 257 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 436
FSLHLAGISS SFDQ+PLF+ AVGITA AGAIT
Sbjct: 121 FSLHLAGISSILGAINFITTIINMRINKMSFDQMPLFIWAVGITALLLLLSLPVLAGAIT 180
Query: 437 ILLTDRNLNTSFFDPAGGGDPILY 508
+LLTDRNLNTSFFDPAGGGDPILY
Sbjct: 181 MLLTDRNLNTSFFDPAGGGDPILY 204
Score = 89.8 bits (213), Expect = 6e-17
Identities = 44/69 (63%), Positives = 49/69 (71%)
Frame = +3
Query: 54 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 233
N L+PL+LGAPD+AFPR+NN+ F IVENGAGTG TVYPPLSSNIAH
Sbjct: 53 NWLIPLMLGAPDMAFPRMNNMSFWLLPPSLILLISSSIVENGAGTGWTVYPPLSSNIAHG 112
Query: 234 GRSVDLAFF 260
G SVDLA F
Sbjct: 113 GSSVDLAIF 121
Score = 34.3 bits (75), Expect = 2.9
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +1
Query: 511 HLF*FFGHPEVYILI 555
HLF FFGHPEVYILI
Sbjct: 206 HLFWFFGHPEVYILI 220
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 83.8 bits (198), Expect = 4e-15
Identities = 43/84 (51%), Positives = 51/84 (60%)
Frame = +2
Query: 257 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 436
FSLHL+G+SS + +LPLFV +V +TAF AGAIT
Sbjct: 151 FSLHLSGVSSILGSINFITTIFNMRGPGMTMHRLPLFVWSVLVTAFLLLLSLPVLAGAIT 210
Query: 437 ILLTDRNLNTSFFDPAGGGDPILY 508
+LLTDRN NT+FFDPAGGGDPILY
Sbjct: 211 MLLTDRNFNTTFFDPAGGGDPILY 234
Score = 73.7 bits (173), Expect = 4e-12
Identities = 35/69 (50%), Positives = 44/69 (63%)
Frame = +3
Query: 54 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 233
N VP+++GAPD+AFPR+NNI F +VE G+GTG TVYPPLS +H
Sbjct: 83 NWFVPILIGAPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLSGITSHS 142
Query: 234 GRSVDLAFF 260
G +VDLA F
Sbjct: 143 GGAVDLAIF 151
Score = 67.3 bits (157), Expect = 3e-10
Identities = 37/63 (58%), Positives = 41/63 (65%)
Frame = +1
Query: 511 HLF*FFGHPEVYILILPGFGIISHIISQERGKKETFGCLGNNLCYTSNWVIRIHCFELHH 690
HLF FFGHPEVYILILPGFGIISHI+S G K FG LG S V+ + HH
Sbjct: 236 HLFWFFGHPEVYILILPGFGIISHIVSTFSG-KPVFGYLGMVYAMISIGVLGFLVW-AHH 293
Query: 691 IFT 699
+FT
Sbjct: 294 MFT 296
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 83.0 bits (196), Expect = 6e-15
Identities = 41/69 (59%), Positives = 46/69 (66%)
Frame = +3
Query: 54 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 233
N LVPL+LGAPD+AFPR+NN+ F VE+GAGTG TVYPPLS N AH
Sbjct: 63 NWLVPLMLGAPDMAFPRLNNMSFWFLPPSLSLLLMSAAVESGAGTGWTVYPPLSGNTAHA 122
Query: 234 GRSVDLAFF 260
G SVDLA F
Sbjct: 123 GPSVDLAIF 131
Score = 80.2 bits (189), Expect = 4e-14
Identities = 43/84 (51%), Positives = 48/84 (57%)
Frame = +2
Query: 257 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 436
FSLHLAG+SS + + LFV +V ITA AGAIT
Sbjct: 131 FSLHLAGVSSILGAVNFITTVINMRWGAMKIELVSLFVWSVKITAILLLLSLPVLAGAIT 190
Query: 437 ILLTDRNLNTSFFDPAGGGDPILY 508
+LLTDRN NTSFFDPAGGGDPILY
Sbjct: 191 MLLTDRNFNTSFFDPAGGGDPILY 214
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 83.0 bits (196), Expect = 6e-15
Identities = 43/84 (51%), Positives = 50/84 (59%)
Frame = +2
Query: 257 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 436
FSLHL+GISS + +LPLFV A+ +TA AGAIT
Sbjct: 148 FSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAILLLLSLPVLAGAIT 207
Query: 437 ILLTDRNLNTSFFDPAGGGDPILY 508
+LLTDRN NTSF+DPAGGGDPILY
Sbjct: 208 MLLTDRNFNTSFYDPAGGGDPILY 231
Score = 76.6 bits (180), Expect = 6e-13
Identities = 38/69 (55%), Positives = 44/69 (63%)
Frame = +3
Query: 54 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 233
N LVP+++GAPD+AFPR+NNI F VE GAGTG TVYPPLS +H
Sbjct: 80 NYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHS 139
Query: 234 GRSVDLAFF 260
G SVDLA F
Sbjct: 140 GGSVDLAIF 148
Score = 61.7 bits (143), Expect = 2e-08
Identities = 28/40 (70%), Positives = 32/40 (80%)
Frame = +1
Query: 511 HLF*FFGHPEVYILILPGFGIISHIISQERGKKETFGCLG 630
HLF FFGHPEVYILI+PGFG++SHI+S G K FG LG
Sbjct: 233 HLFWFFGHPEVYILIIPGFGMVSHIVSAFSG-KPVFGYLG 271
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 83.0 bits (196), Expect = 6e-15
Identities = 43/84 (51%), Positives = 50/84 (59%)
Frame = +2
Query: 257 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 436
FSLHL+GISS + +LPLFV A+ +TA AGAIT
Sbjct: 148 FSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAILLLLSLPVLAGAIT 207
Query: 437 ILLTDRNLNTSFFDPAGGGDPILY 508
+LLTDRN NTSF+DPAGGGDPILY
Sbjct: 208 MLLTDRNFNTSFYDPAGGGDPILY 231
Score = 76.6 bits (180), Expect = 6e-13
Identities = 38/69 (55%), Positives = 44/69 (63%)
Frame = +3
Query: 54 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 233
N LVP+++GAPD+AFPR+NNI F VE GAGTG TVYPPLS +H
Sbjct: 80 NYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHS 139
Query: 234 GRSVDLAFF 260
G SVDLA F
Sbjct: 140 GGSVDLAIF 148
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 81.8 bits (193), Expect = 1e-14
Identities = 43/84 (51%), Positives = 50/84 (59%)
Frame = +2
Query: 257 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 436
FSLH+AG+ S + ++PLFV AV ITA AGAIT
Sbjct: 67 FSLHMAGVXSILGAINFISTVLNMRPSGMTPXRMPLFVWAVEITAILLLLSLPVLAGAIT 126
Query: 437 ILLTDRNLNTSFFDPAGGGDPILY 508
+LLTDRN+NTSFFDPAGGGDPILY
Sbjct: 127 MLLTDRNINTSFFDPAGGGDPILY 150
Score = 66.9 bits (156), Expect = 4e-10
Identities = 37/64 (57%), Positives = 39/64 (60%)
Frame = +3
Query: 69 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 248
L LGAPD FPR N+ F VE GAGTG TV PPLS+NIAH G SVD
Sbjct: 4 LXLGAPDXXFPRXINMSFWFLPPXLSFFLXSSXVEKGAGTGWTVSPPLSANIAHEGSSVD 63
Query: 249 LAFF 260
LA F
Sbjct: 64 LAIF 67
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 81.0 bits (191), Expect = 3e-14
Identities = 40/69 (57%), Positives = 47/69 (68%)
Frame = +3
Query: 54 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 233
N LVPL++GAPD+AFPR+NN+ F VE GAGTG TVYPPL+ N+AH
Sbjct: 81 NWLVPLMIGAPDMAFPRMNNMSFWLXPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHA 140
Query: 234 GRSVDLAFF 260
G SVDLA F
Sbjct: 141 GASVDLAIF 149
Score = 79.4 bits (187), Expect = 8e-14
Identities = 45/84 (53%), Positives = 48/84 (57%)
Frame = +2
Query: 257 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 436
FSLHLAGISS S Q PLFV +V ITA A IT
Sbjct: 149 FSLHLAGISSILGAINFITTAINMKPPAISQYQTPLFVWSVLITAVLLLLSLPVLAAGIT 208
Query: 437 ILLTDRNLNTSFFDPAGGGDPILY 508
+LLTDRNLNT+FFDPAGGGDPILY
Sbjct: 209 MLLTDRNLNTTFFDPAGGGDPILY 232
Score = 69.3 bits (162), Expect = 8e-11
Identities = 29/40 (72%), Positives = 34/40 (85%)
Frame = +1
Query: 511 HLF*FFGHPEVYILILPGFGIISHIISQERGKKETFGCLG 630
HLF FFGHPEVYILILPGFG+ISH+++ GKKE FG +G
Sbjct: 234 HLFWFFGHPEVYILILPGFGMISHVVTYYAGKKEPFGYMG 273
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 79.8 bits (188), Expect = 6e-14
Identities = 44/84 (52%), Positives = 48/84 (57%)
Frame = +2
Query: 257 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 436
FSLHLAG+SS S Q PLFV AV +TA A IT
Sbjct: 148 FSLHLAGVSSILGAINFITTTINMKPPTISQYQTPLFVWAVLVTAVLLLLSLPVLAAGIT 207
Query: 437 ILLTDRNLNTSFFDPAGGGDPILY 508
+LLTDRNLNT+FFDPAGGGDPILY
Sbjct: 208 MLLTDRNLNTTFFDPAGGGDPILY 231
Score = 78.2 bits (184), Expect = 2e-13
Identities = 38/69 (55%), Positives = 45/69 (65%)
Frame = +3
Query: 54 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 233
N LVPL++GAPD+AFPR+NN+ F VE GAGTG TVYPPL+ N+AH
Sbjct: 80 NWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHA 139
Query: 234 GRSVDLAFF 260
G SVDL F
Sbjct: 140 GASVDLTIF 148
Score = 70.9 bits (166), Expect = 3e-11
Identities = 34/63 (53%), Positives = 43/63 (68%)
Frame = +1
Query: 511 HLF*FFGHPEVYILILPGFGIISHIISQERGKKETFGCLGNNLCYTSNWVIRIHCFELHH 690
HLF FFGHPEVYILILPGFGIISH+++ GKKE FG +G + ++ + HH
Sbjct: 233 HLFWFFGHPEVYILILPGFGIISHVVAYYAGKKEPFGYMGMVWAMMAIGLLGFIVW-AHH 291
Query: 691 IFT 699
+FT
Sbjct: 292 MFT 294
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 79.0 bits (186), Expect = 1e-13
Identities = 42/84 (50%), Positives = 49/84 (58%)
Frame = +2
Query: 257 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 436
FSLHLAG SS + D++ LF +V ITA AGAIT
Sbjct: 132 FSLHLAGASSIMGAVNFITTILNMRSNLFNMDKMSLFSWSVFITAILLLLSLPVLAGAIT 191
Query: 437 ILLTDRNLNTSFFDPAGGGDPILY 508
+LLTDRN+NTSFFDP+GGGDPILY
Sbjct: 192 MLLTDRNMNTSFFDPSGGGDPILY 215
Score = 75.8 bits (178), Expect = 1e-12
Identities = 34/40 (85%), Positives = 35/40 (87%)
Frame = +1
Query: 511 HLF*FFGHPEVYILILPGFGIISHIISQERGKKETFGCLG 630
HLF FFGHPEVYILILPGFGIISH+I E GKKETFG LG
Sbjct: 217 HLFWFFGHPEVYILILPGFGIISHMIFNESGKKETFGMLG 256
Score = 68.1 bits (159), Expect = 2e-10
Identities = 32/69 (46%), Positives = 41/69 (59%)
Frame = +3
Query: 54 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 233
N L+PL+LG+PD++FPR+NN+ F + G GTG TVYPPLS + H
Sbjct: 64 NWLIPLMLGSPDMSFPRMNNMSFWLLIPSLLLLILSMFINVGVGTGWTVYPPLSLILGHG 123
Query: 234 GRSVDLAFF 260
G SVDL F
Sbjct: 124 GMSVDLGIF 132
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 79.0 bits (186), Expect = 1e-13
Identities = 42/84 (50%), Positives = 49/84 (58%)
Frame = +2
Query: 257 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 436
FSLHLAG+SS + ++PLFV +V ITA AGAIT
Sbjct: 149 FSLHLAGLSSILGAMNFITTVMNMRTPGMTMSRIPLFVWSVLITAILLLLSLPVLAGAIT 208
Query: 437 ILLTDRNLNTSFFDPAGGGDPILY 508
+LLTDR NT+FFDPAGGGDPILY
Sbjct: 209 MLLTDRYFNTTFFDPAGGGDPILY 232
Score = 77.8 bits (183), Expect = 2e-13
Identities = 38/69 (55%), Positives = 45/69 (65%)
Frame = +3
Query: 54 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 233
N VPL++GAPD+AFPR+NNI F +VE GAGTG TVYPPL+S AH
Sbjct: 81 NWFVPLMIGAPDMAFPRLNNISFWLLPPALFLLLGSSLVEQGAGTGWTVYPPLASIQAHS 140
Query: 234 GRSVDLAFF 260
G SVD+A F
Sbjct: 141 GGSVDMAIF 149
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 78.2 bits (184), Expect = 2e-13
Identities = 38/69 (55%), Positives = 45/69 (65%)
Frame = +3
Query: 54 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 233
N LVPL++GAPD+AFPR+NN+ F VE GAGTG TVYPPL+ N+AH
Sbjct: 80 NWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHA 139
Query: 234 GRSVDLAFF 260
G SVDL F
Sbjct: 140 GASVDLTIF 148
Score = 77.4 bits (182), Expect = 3e-13
Identities = 42/84 (50%), Positives = 48/84 (57%)
Frame = +2
Query: 257 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 436
FSLHLAG+SS + Q PLFV +V +TA A IT
Sbjct: 148 FSLHLAGVSSILGAINFITTIINMKPPAITQYQTPLFVWSVLVTAVLLLLSLPVLAAGIT 207
Query: 437 ILLTDRNLNTSFFDPAGGGDPILY 508
+LLTDRNLNT+FFDPAGGGDPILY
Sbjct: 208 MLLTDRNLNTTFFDPAGGGDPILY 231
Score = 69.7 bits (163), Expect = 6e-11
Identities = 33/63 (52%), Positives = 43/63 (68%)
Frame = +1
Query: 511 HLF*FFGHPEVYILILPGFGIISHIISQERGKKETFGCLGNNLCYTSNWVIRIHCFELHH 690
HLF FFGHPEVYILILPGFG+ISH+++ GKKE FG +G + ++ + HH
Sbjct: 233 HLFWFFGHPEVYILILPGFGMISHVVTYYAGKKEPFGYMGMVWAMMAIGLLGFIVW-AHH 291
Query: 691 IFT 699
+FT
Sbjct: 292 MFT 294
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 77.8 bits (183), Expect = 2e-13
Identities = 43/84 (51%), Positives = 48/84 (57%)
Frame = +2
Query: 257 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 436
FSLHLAG+SS + Q PLFV +V ITA A IT
Sbjct: 148 FSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGIT 207
Query: 437 ILLTDRNLNTSFFDPAGGGDPILY 508
+LLTDRNLNT+FFDPAGGGDPILY
Sbjct: 208 MLLTDRNLNTTFFDPAGGGDPILY 231
Score = 77.4 bits (182), Expect = 3e-13
Identities = 37/69 (53%), Positives = 45/69 (65%)
Frame = +3
Query: 54 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 233
N LVPL++GAPD+AFPR+NN+ F +VE GAGTG TVYPPL+ N +H
Sbjct: 80 NWLVPLMIGAPDMAFPRMNNMSFWLLPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHP 139
Query: 234 GRSVDLAFF 260
G SVDL F
Sbjct: 140 GASVDLTIF 148
Score = 70.5 bits (165), Expect = 4e-11
Identities = 35/63 (55%), Positives = 42/63 (66%)
Frame = +1
Query: 511 HLF*FFGHPEVYILILPGFGIISHIISQERGKKETFGCLGNNLCYTSNWVIRIHCFELHH 690
HLF FFGHPEVYILILPGFG+ISHI++ GKKE FG +G S + + HH
Sbjct: 233 HLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVW-AHH 291
Query: 691 IFT 699
+FT
Sbjct: 292 MFT 294
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 77.4 bits (182), Expect = 3e-13
Identities = 36/69 (52%), Positives = 45/69 (65%)
Frame = +3
Query: 54 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 233
N L+PL++GAPD+AFPR+NN+ F +E GAGTG TVYPPL+ N+AH
Sbjct: 69 NWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGIEAGAGTGWTVYPPLAGNLAHA 128
Query: 234 GRSVDLAFF 260
G SVDL F
Sbjct: 129 GASVDLTIF 137
Score = 60.5 bits (140), Expect = 4e-08
Identities = 37/75 (49%), Positives = 39/75 (52%)
Frame = +2
Query: 257 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 436
FSLHLAGISS S Q PLFV AV ITA A IT
Sbjct: 137 FSLHLAGISSILGAINFITTIMNMKPPAISQYQTPLFVWAVLITAVLLLLSLPVLAAGIT 196
Query: 437 ILLTDRNLNTSFFDP 481
+LLTDRNLNT+FFDP
Sbjct: 197 MLLTDRNLNTTFFDP 211
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 77.4 bits (182), Expect = 3e-13
Identities = 40/69 (57%), Positives = 45/69 (65%)
Frame = +3
Query: 54 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 233
N L+PL++GA D AFPRINNI F +VE+GAGTG TVYPPLSS AH
Sbjct: 81 NYLLPLMIGATDTAFPRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHS 140
Query: 234 GRSVDLAFF 260
G SVDLA F
Sbjct: 141 GPSVDLAIF 149
Score = 67.7 bits (158), Expect = 3e-10
Identities = 36/84 (42%), Positives = 45/84 (53%)
Frame = +2
Query: 257 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 436
F+LHL ISS + +LPLFV ++ ITAF + IT
Sbjct: 149 FALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWSIFITAFLLLLSLPVLSAGIT 208
Query: 437 ILLTDRNLNTSFFDPAGGGDPILY 508
+LL DRN NTSFF+ +GGGDPILY
Sbjct: 209 MLLLDRNFNTSFFEVSGGGDPILY 232
Score = 60.1 bits (139), Expect = 5e-08
Identities = 27/37 (72%), Positives = 30/37 (81%)
Frame = +1
Query: 511 HLF*FFGHPEVYILILPGFGIISHIISQERGKKETFG 621
HLF FFGHPEVYILI+PGFGIISH++S KK FG
Sbjct: 234 HLFWFFGHPEVYILIIPGFGIISHVVS-TYSKKPVFG 269
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 77.4 bits (182), Expect = 3e-13
Identities = 40/69 (57%), Positives = 45/69 (65%)
Frame = +3
Query: 54 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 233
N L+PL++GA D AFPRINNI F +VE+GAGTG TVYPPLSS AH
Sbjct: 81 NYLLPLMIGATDTAFPRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHS 140
Query: 234 GRSVDLAFF 260
G SVDLA F
Sbjct: 141 GPSVDLAIF 149
Score = 67.7 bits (158), Expect = 3e-10
Identities = 36/84 (42%), Positives = 45/84 (53%)
Frame = +2
Query: 257 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 436
F+LHL ISS + +LPLFV ++ ITAF + IT
Sbjct: 149 FALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWSIFITAFLLLLSLPVLSAGIT 208
Query: 437 ILLTDRNLNTSFFDPAGGGDPILY 508
+LL DRN NTSFF+ +GGGDPILY
Sbjct: 209 MLLLDRNFNTSFFEVSGGGDPILY 232
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 77.4 bits (182), Expect = 3e-13
Identities = 40/84 (47%), Positives = 49/84 (58%)
Frame = +2
Query: 257 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 436
FSLH++G SS S ++PLFV ++ +TAF AGAIT
Sbjct: 156 FSLHISGASSILGAVNFISTILNMRSPGQSMYRIPLFVWSILVTAFLLLLAVPVLAGAIT 215
Query: 437 ILLTDRNLNTSFFDPAGGGDPILY 508
+LLTDRN NTSFFD +GGGDPILY
Sbjct: 216 MLLTDRNFNTSFFDASGGGDPILY 239
Score = 74.1 bits (174), Expect = 3e-12
Identities = 36/69 (52%), Positives = 45/69 (65%)
Frame = +3
Query: 54 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 233
N LVP+++G+PD+AFPR+NNI F +VE G GTG TVYPPLSS +H
Sbjct: 88 NWLVPIMIGSPDMAFPRLNNISFWLLPPSLCLLLMSALVEVGVGTGWTVYPPLSSIQSHS 147
Query: 234 GRSVDLAFF 260
G +VDLA F
Sbjct: 148 GGAVDLAIF 156
Score = 63.3 bits (147), Expect = 6e-09
Identities = 33/63 (52%), Positives = 41/63 (65%)
Frame = +1
Query: 511 HLF*FFGHPEVYILILPGFGIISHIISQERGKKETFGCLGNNLCYTSNWVIRIHCFELHH 690
HLF FFGHPEVYILILPGFG+ISHI+S +K FG +G S V+ + HH
Sbjct: 241 HLFWFFGHPEVYILILPGFGMISHIVS-TFSRKPVFGYIGMVYAMVSIGVLGFIVW-AHH 298
Query: 691 IFT 699
++T
Sbjct: 299 MYT 301
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 77.0 bits (181), Expect = 4e-13
Identities = 37/64 (57%), Positives = 43/64 (67%)
Frame = +3
Query: 69 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 248
L+LGAPD+AFPR+NN+ F +VENGAGTG TVYPPLSS AH G SVD
Sbjct: 1 LMLGAPDMAFPRMNNMSFWMLPPSLTLLLSSSMVENGAGTGWTVYPPLSSGTAHAGASVD 60
Query: 249 LAFF 260
LA +
Sbjct: 61 LAIY 64
Score = 40.7 bits (91), Expect = 0.034
Identities = 20/44 (45%), Positives = 22/44 (50%)
Frame = +1
Query: 367 CMSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRP 498
CM C +Y TCFS S+Y IIN K KY IF W P
Sbjct: 97 CMICCNYCYFITSFFTCFSSSHYYIINWPKSKYFIFWPNWSSSP 140
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 76.6 bits (180), Expect = 6e-13
Identities = 38/69 (55%), Positives = 44/69 (63%)
Frame = +3
Query: 54 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 233
N LVP+++GAPD+AFPR+NNI F VE GAGTG TVYPPLS +H
Sbjct: 80 NYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHS 139
Query: 234 GRSVDLAFF 260
G SVDLA F
Sbjct: 140 GGSVDLAIF 148
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 74.9 bits (176), Expect = 2e-12
Identities = 38/69 (55%), Positives = 45/69 (65%)
Frame = +3
Query: 54 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 233
N ++PL++GA D AFPRINNI F +VE+GAGTG TVYPPL+S AH
Sbjct: 81 NYMLPLMIGATDTAFPRINNIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLASIQAHS 140
Query: 234 GRSVDLAFF 260
G SVDLA F
Sbjct: 141 GPSVDLAIF 149
Score = 65.7 bits (153), Expect = 1e-09
Identities = 35/84 (41%), Positives = 44/84 (52%)
Frame = +2
Query: 257 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 436
F+LH+ ISS + +LPLFV A+ ITA + +T
Sbjct: 149 FALHMTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWAILITAVLLLLTLPVLSAGVT 208
Query: 437 ILLTDRNLNTSFFDPAGGGDPILY 508
+LL DRN NTSFF+ AGGGDPILY
Sbjct: 209 MLLLDRNFNTSFFEVAGGGDPILY 232
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 73.7 bits (173), Expect = 4e-12
Identities = 31/44 (70%), Positives = 33/44 (75%)
Frame = +3
Query: 501 FYITFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRE 632
F TFILIFWT SLYFNFT IWYNFSYYF K KK N W+F +
Sbjct: 23 FMSTFILIFWTPSSLYFNFTSIWYNFSYYFPSKSKKGNLWVFSD 66
Score = 44.0 bits (99), Expect = 0.004
Identities = 24/82 (29%), Positives = 32/82 (39%)
Frame = +1
Query: 454 KLKYIIF*SCWRRRPNFI*HLF*FFGHPEVYILILPGFGIISHIISQERGKKETFGCLGN 633
K KYIIF S W F+ F P + KK +
Sbjct: 7 KFKYIIFWSSWSSWSYFMSTFILIFWTPSSLYFNFTSIWYNFSYYFPSKSKKGNLWVFSD 66
Query: 634 NLCYTSNWVIRIHCFELHHIFT 699
NLCY SNW+I I+C +I++
Sbjct: 67 NLCYISNWIISIYCLSSSYIYS 88
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 73.7 bits (173), Expect = 4e-12
Identities = 37/69 (53%), Positives = 46/69 (66%)
Frame = +3
Query: 54 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 233
N ++PL++GA D++FPRIN+I F +VE+GAGTG TVYPPLSS AH
Sbjct: 81 NYMLPLMIGATDMSFPRINSIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHS 140
Query: 234 GRSVDLAFF 260
G SVDLA F
Sbjct: 141 GPSVDLAIF 149
Score = 70.1 bits (164), Expect = 5e-11
Identities = 38/84 (45%), Positives = 44/84 (52%)
Frame = +2
Query: 257 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 436
FSLHL ISS S ++PLFV A+ ITAF + IT
Sbjct: 149 FSLHLTSISSLLGAINFIVTTLNMRTNGMSMHKMPLFVWAIFITAFLLLLSLPVLSAGIT 208
Query: 437 ILLTDRNLNTSFFDPAGGGDPILY 508
+LL DRN NTSFF+ AGGGDPI Y
Sbjct: 209 MLLMDRNFNTSFFEVAGGGDPIFY 232
Score = 60.1 bits (139), Expect = 5e-08
Identities = 28/42 (66%), Positives = 31/42 (73%)
Frame = +1
Query: 496 PNFI*HLF*FFGHPEVYILILPGFGIISHIISQERGKKETFG 621
P F H F FFGHPEVYILI+PGFGI+SHI+S KK FG
Sbjct: 229 PIFYQHAFWFFGHPEVYILIIPGFGIVSHIVS-TYSKKPVFG 269
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 71.7 bits (168), Expect = 2e-11
Identities = 35/63 (55%), Positives = 43/63 (68%)
Frame = +1
Query: 511 HLF*FFGHPEVYILILPGFGIISHIISQERGKKETFGCLGNNLCYTSNWVIRIHCFELHH 690
HLF FFGHPEVYILILPGFG+ISH+I+ GK+E FG LG + V+ + HH
Sbjct: 210 HLFXFFGHPEVYILILPGFGMISHVIAHYSGKREPFGYLGMVYAMIAIGVLGFLVW-AHH 268
Query: 691 IFT 699
+FT
Sbjct: 269 MFT 271
Score = 33.1 bits (72), Expect = 6.7
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +2
Query: 455 NLNTSFFDPAGGGDPILY 508
N T+FFDPAGGGD IL+
Sbjct: 191 NYYTTFFDPAGGGDXILF 208
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 70.1 bits (164), Expect = 5e-11
Identities = 35/84 (41%), Positives = 48/84 (57%)
Frame = +2
Query: 257 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 436
F++H++G SS + ++PLF +V +TA+ AGAIT
Sbjct: 254 FAVHVSGASSILGSINFITTFLNMRAPGMTLHKVPLFAWSVFVTAWLLLLSLPVLAGAIT 313
Query: 437 ILLTDRNLNTSFFDPAGGGDPILY 508
+LLTDRN T+FFDPAGGGDPIL+
Sbjct: 314 MLLTDRNFGTTFFDPAGGGDPILF 337
Score = 61.7 bits (143), Expect = 2e-08
Identities = 27/69 (39%), Positives = 40/69 (57%)
Frame = +3
Query: 54 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 233
N +PL++GAPD+AFPR+NN+ + +++ GAG G T YPP+S+
Sbjct: 186 NYFMPLMIGAPDMAFPRLNNLSYWMYVAGTCLAFCSVMIDGGAGPGWTFYPPISAQGVET 245
Query: 234 GRSVDLAFF 260
R+VD A F
Sbjct: 246 SRAVDFAIF 254
Score = 55.2 bits (127), Expect = 1e-06
Identities = 25/39 (64%), Positives = 30/39 (76%)
Frame = +1
Query: 511 HLF*FFGHPEVYILILPGFGIISHIISQERGKKETFGCL 627
H+F FFGHPEVYI+ILP FG+ISHI++ KK FG L
Sbjct: 339 HIFWFFGHPEVYIVILPAFGVISHIVA-TFSKKPIFGYL 376
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 68.9 bits (161), Expect = 1e-10
Identities = 33/71 (46%), Positives = 41/71 (57%)
Frame = +3
Query: 54 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 233
N VP+++GAPD++FPR+NN F E G GTG TVYPPLSS +H
Sbjct: 84 NYFVPILIGAPDMSFPRLNNFSFWLLPGAILLAVLATYSEGGPGTGWTVYPPLSSLQSHS 143
Query: 234 GRSVDLAFFHY 266
G SVDL F +
Sbjct: 144 GASVDLMIFSF 154
Score = 67.7 bits (158), Expect = 3e-10
Identities = 36/84 (42%), Positives = 42/84 (50%)
Frame = +2
Query: 257 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 436
FS HL GI S LPLFV +V +T+F A AIT
Sbjct: 152 FSFHLVGIGSIVAAINFICTIFYYKNEAMFNKDLPLFVWSVAVTSFLVIVAIPVLAAAIT 211
Query: 437 ILLTDRNLNTSFFDPAGGGDPILY 508
+LL DRN NTSF+DP GGGD +LY
Sbjct: 212 LLLFDRNFNTSFYDPVGGGDVVLY 235
Score = 59.3 bits (137), Expect = 9e-08
Identities = 27/37 (72%), Positives = 30/37 (81%)
Frame = +1
Query: 511 HLF*FFGHPEVYILILPGFGIISHIISQERGKKETFG 621
HLF FFGHPEVYILILPGFG++SHII+ KK FG
Sbjct: 237 HLFWFFGHPEVYILILPGFGLVSHIIA-TFSKKRVFG 272
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 68.5 bits (160), Expect = 1e-10
Identities = 30/69 (43%), Positives = 41/69 (59%)
Frame = +3
Query: 54 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 233
N L+P+++G PD+AFPR+NN+ + I+ENG GTG T+YPPLS +H
Sbjct: 107 NFLLPILIGGPDMAFPRLNNVSYWLLIPSLFLFVFAAIIENGVGTGWTLYPPLSGIQSHS 166
Query: 234 GRSVDLAFF 260
VDL F
Sbjct: 167 SMGVDLGIF 175
Score = 65.7 bits (153), Expect = 1e-09
Identities = 39/84 (46%), Positives = 44/84 (52%)
Frame = +2
Query: 257 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 436
F LHL+GISS +L LF AV ITA A AIT
Sbjct: 175 FGLHLSGISSLLGAINFIATLLNMRSPGIKLHKLALFGWAVVITAVLLLLSLPVLAAAIT 234
Query: 437 ILLTDRNLNTSFFDPAGGGDPILY 508
+LLTDRNLNTSF++ AGGGD ILY
Sbjct: 235 MLLTDRNLNTSFYELAGGGDAILY 258
Score = 60.1 bits (139), Expect = 5e-08
Identities = 32/63 (50%), Positives = 39/63 (61%)
Frame = +1
Query: 511 HLF*FFGHPEVYILILPGFGIISHIISQERGKKETFGCLGNNLCYTSNWVIRIHCFELHH 690
HLF FFGHPEVYILI+PGFGIIS +IS K FG LG S ++ + HH
Sbjct: 260 HLFWFFGHPEVYILIIPGFGIISTVIS-ANSNKNVFGYLGMVYAMMSIGLLGFIVWS-HH 317
Query: 691 IFT 699
++T
Sbjct: 318 MYT 320
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 68.5 bits (160), Expect = 1e-10
Identities = 34/69 (49%), Positives = 41/69 (59%)
Frame = +3
Query: 54 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 233
N L+PL LG PD+ FPR+NNI + +ENG GTG T+YPPLS +H
Sbjct: 81 NFLLPLGLGGPDMGFPRLNNISYLLLIPSIVLFLFAGGIENGVGTGWTLYPPLSGIQSHS 140
Query: 234 GRSVDLAFF 260
G SVDLA F
Sbjct: 141 GPSVDLAIF 149
Score = 68.5 bits (160), Expect = 1e-10
Identities = 39/84 (46%), Positives = 44/84 (52%)
Frame = +2
Query: 257 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 436
F LHL+GISS +L LF AV ITA AG IT
Sbjct: 149 FGLHLSGISSLLGAMNFMTTTFNMRSPGIRLHKLILFAWAVVITAVLLLLSLPVLAGGIT 208
Query: 437 ILLTDRNLNTSFFDPAGGGDPILY 508
++LTDRN NTSFF+ AGGGDPILY
Sbjct: 209 MVLTDRNFNTSFFEVAGGGDPILY 232
Score = 59.3 bits (137), Expect = 9e-08
Identities = 32/63 (50%), Positives = 38/63 (60%)
Frame = +1
Query: 511 HLF*FFGHPEVYILILPGFGIISHIISQERGKKETFGCLGNNLCYTSNWVIRIHCFELHH 690
HLF FFGHPEVYILI+PGFGIIS IS K FG LG S ++ + HH
Sbjct: 234 HLFWFFGHPEVYILIIPGFGIISTTIS-ANSNKSVFGYLGMVYAMCSIGILGFVVWS-HH 291
Query: 691 IFT 699
++T
Sbjct: 292 MYT 294
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 67.3 bits (157), Expect = 3e-10
Identities = 36/83 (43%), Positives = 45/83 (54%)
Frame = +2
Query: 260 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 439
SLH+AG SS + ++PLFV +V +TAF A AIT+
Sbjct: 192 SLHIAGASSILGAINFITTILNMRAPGMTLHKMPLFVWSVLVTAFLLLLALPVLAAAITM 251
Query: 440 LLTDRNLNTSFFDPAGGGDPILY 508
LLTDRN T+F+D AGGGDP LY
Sbjct: 252 LLTDRNFGTTFYDAAGGGDPELY 274
Score = 62.9 bits (146), Expect = 7e-09
Identities = 34/68 (50%), Positives = 41/68 (60%)
Frame = +1
Query: 496 PNFI*HLF*FFGHPEVYILILPGFGIISHIISQERGKKETFGCLGNNLCYTSNWVIRIHC 675
P HLF FFGHPEVYI+ILPGFGIIS I+S +K FG LG + V+
Sbjct: 271 PELYQHLFWFFGHPEVYIMILPGFGIISQIVS-TFSRKPVFGYLGMAYAMVAIGVVGFVV 329
Query: 676 FELHHIFT 699
+ HH+FT
Sbjct: 330 W-AHHMFT 336
Score = 55.2 bits (127), Expect = 1e-06
Identities = 32/71 (45%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Frame = +3
Query: 54 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVE----NGAGTG*TVYPPLSSN 221
N VP+++GAPD+AFPR+NNI F V NGAGTG TVY PLS++
Sbjct: 120 NWFVPIMIGAPDMAFPRMNNISFWLLIPAFALLLGSTFVPGGTGNGAGTGWTVYAPLSTS 179
Query: 222 IAHRGRSVDLA 254
G +VD+A
Sbjct: 180 -GSAGPAVDMA 189
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 66.5 bits (155), Expect = 6e-10
Identities = 35/73 (47%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Frame = +3
Query: 54 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV----YPPLSSN 221
N L+PL++G PD+AFPR+NNI F I+E G GTG T+ YPPLS
Sbjct: 109 NFLMPLMIGGPDMAFPRLNNISFWLLPPSLLLLVFSAIIEGGVGTGWTLLKDKYPPLSGL 168
Query: 222 IAHRGRSVDLAFF 260
+H G SVDLA F
Sbjct: 169 QSHSGPSVDLAIF 181
Score = 56.0 bits (129), Expect = 8e-07
Identities = 27/40 (67%), Positives = 29/40 (72%)
Frame = +1
Query: 511 HLF*FFGHPEVYILILPGFGIISHIISQERGKKETFGCLG 630
HLF FFGHPEVYILI+PGFGIIS IS K FG +G
Sbjct: 259 HLFWFFGHPEVYILIIPGFGIISTTISSS-SNKPIFGYIG 297
Score = 48.4 bits (110), Expect = 2e-04
Identities = 20/26 (76%), Positives = 24/26 (92%)
Frame = +2
Query: 431 ITILLTDRNLNTSFFDPAGGGDPILY 508
IT++LTDRN NTSFF+ AGGGDPIL+
Sbjct: 232 ITMVLTDRNFNTSFFEVAGGGDPILF 257
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 65.7 bits (153), Expect = 1e-09
Identities = 35/84 (41%), Positives = 45/84 (53%)
Frame = +2
Query: 257 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 436
F+LHL+G+SS + +LPLFV +V ITA A +T
Sbjct: 166 FALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGLT 225
Query: 437 ILLTDRNLNTSFFDPAGGGDPILY 508
+LL DRN NTSFF +GGGDP+LY
Sbjct: 226 MLLMDRNFNTSFFVVSGGGDPLLY 249
Score = 64.5 bits (150), Expect = 2e-09
Identities = 30/69 (43%), Positives = 42/69 (60%)
Frame = +3
Query: 54 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 233
N LVPL +G+ D AFPRINN+ F +++ G G+G T+YPPL+S +H
Sbjct: 98 NYLVPLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHS 157
Query: 234 GRSVDLAFF 260
G S+D+A F
Sbjct: 158 GSSIDMAIF 166
Score = 57.6 bits (133), Expect = 3e-07
Identities = 30/63 (47%), Positives = 38/63 (60%)
Frame = +1
Query: 511 HLF*FFGHPEVYILILPGFGIISHIISQERGKKETFGCLGNNLCYTSNWVIRIHCFELHH 690
H+F FFGHPEVYILI+P FG++S I+ Q KK FG +G S + C HH
Sbjct: 251 HIFWFFGHPEVYILIVPVFGVVSQIV-QVYAKKPIFGKIGMIYAMASIGFLGF-CVWSHH 308
Query: 691 IFT 699
+FT
Sbjct: 309 MFT 311
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 65.7 bits (153), Expect = 1e-09
Identities = 35/84 (41%), Positives = 45/84 (53%)
Frame = +2
Query: 257 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 436
F+LHL+G+SS + +LPLFV +V ITA A +T
Sbjct: 166 FALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGLT 225
Query: 437 ILLTDRNLNTSFFDPAGGGDPILY 508
+LL DRN NTSFF +GGGDP+LY
Sbjct: 226 MLLMDRNFNTSFFVVSGGGDPLLY 249
Score = 64.5 bits (150), Expect = 2e-09
Identities = 30/69 (43%), Positives = 42/69 (60%)
Frame = +3
Query: 54 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 233
N LVPL +G+ D AFPRINN+ F +++ G G+G T+YPPL+S +H
Sbjct: 98 NYLVPLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHS 157
Query: 234 GRSVDLAFF 260
G S+D+A F
Sbjct: 158 GSSIDMAIF 166
Score = 57.6 bits (133), Expect = 3e-07
Identities = 30/63 (47%), Positives = 38/63 (60%)
Frame = +1
Query: 511 HLF*FFGHPEVYILILPGFGIISHIISQERGKKETFGCLGNNLCYTSNWVIRIHCFELHH 690
H+F FFGHPEVYILI+P FG++S I+ Q KK FG +G S + C HH
Sbjct: 251 HIFWFFGHPEVYILIVPVFGVVSQIV-QVYAKKPIFGKIGMIYAMASIGFLGF-CVWSHH 308
Query: 691 IFT 699
+FT
Sbjct: 309 MFT 311
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 65.7 bits (153), Expect = 1e-09
Identities = 35/84 (41%), Positives = 45/84 (53%)
Frame = +2
Query: 257 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 436
F+LHL+G+SS + +LPLFV +V ITA A +T
Sbjct: 166 FALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGLT 225
Query: 437 ILLTDRNLNTSFFDPAGGGDPILY 508
+LL DRN NTSFF +GGGDP+LY
Sbjct: 226 MLLMDRNFNTSFFVVSGGGDPLLY 249
Score = 64.5 bits (150), Expect = 2e-09
Identities = 30/69 (43%), Positives = 42/69 (60%)
Frame = +3
Query: 54 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 233
N LVPL +G+ D AFPRINN+ F +++ G G+G T+YPPL+S +H
Sbjct: 98 NYLVPLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHS 157
Query: 234 GRSVDLAFF 260
G S+D+A F
Sbjct: 158 GSSIDMAIF 166
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 65.7 bits (153), Expect = 1e-09
Identities = 35/84 (41%), Positives = 45/84 (53%)
Frame = +2
Query: 257 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 436
F+LHL+G+SS + +LPLFV +V ITA A +T
Sbjct: 166 FALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGLT 225
Query: 437 ILLTDRNLNTSFFDPAGGGDPILY 508
+LL DRN NTSFF +GGGDP+LY
Sbjct: 226 MLLMDRNFNTSFFVVSGGGDPLLY 249
Score = 64.5 bits (150), Expect = 2e-09
Identities = 30/69 (43%), Positives = 42/69 (60%)
Frame = +3
Query: 54 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 233
N LVPL +G+ D AFPRINN+ F +++ G G+G T+YPPL+S +H
Sbjct: 98 NYLVPLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHS 157
Query: 234 GRSVDLAFF 260
G S+D+A F
Sbjct: 158 GSSIDMAIF 166
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 64.5 bits (150), Expect = 2e-09
Identities = 31/59 (52%), Positives = 40/59 (67%)
Frame = +1
Query: 523 FFGHPEVYILILPGFGIISHIISQERGKKETFGCLGNNLCYTSNWVIRIHCFELHHIFT 699
FFGHPEVYILILPGFG+ISHI++ GKKE FG +G + ++ + HH+FT
Sbjct: 2 FFGHPEVYILILPGFGMISHIVAYYSGKKEPFGYMGMVWAMMAIGLLGFIVW-AHHMFT 59
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 64.1 bits (149), Expect = 3e-09
Identities = 34/69 (49%), Positives = 42/69 (60%)
Frame = +3
Query: 54 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 233
N L+PL+LGA D+AF R+NNI F +VE GAGTG TVY PL+ +H
Sbjct: 86 NYLMPLMLGASDMAFARLNNISFWLLVPSLILILTSALVEAGAGTGWTVYFPLAGIQSHS 145
Query: 234 GRSVDLAFF 260
G +VDLA F
Sbjct: 146 GPAVDLAIF 154
Score = 59.3 bits (137), Expect = 9e-08
Identities = 32/84 (38%), Positives = 41/84 (48%)
Frame = +2
Query: 257 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 436
FSLHL+G SS ++ +PLF AV TA A +T
Sbjct: 154 FSLHLSGFSSLLGAINFITTFINMRTIGMKYENVPLFAWAVLFTAILLLLSLPVLAAGLT 213
Query: 437 ILLTDRNLNTSFFDPAGGGDPILY 508
+ + DRN NTSFF+ AGGGD +LY
Sbjct: 214 MGIFDRNFNTSFFEYAGGGDAVLY 237
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 61.3 bits (142), Expect = 2e-08
Identities = 26/40 (65%), Positives = 30/40 (75%)
Frame = +1
Query: 511 HLF*FFGHPEVYILILPGFGIISHIISQERGKKETFGCLG 630
HLF FFGHPEVYILILP FG+ISHI+ + K FG +G
Sbjct: 236 HLFWFFGHPEVYILILPAFGVISHILCRSSAKLHVFGKIG 275
Score = 49.2 bits (112), Expect = 1e-04
Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQL-PLFV*AVGITAFXXXXXXXXXAGAI 433
FSLH+AG+SS F L P+ + + T+ A +
Sbjct: 150 FSLHMAGMSSIAGSINFLVTIFNMRMGALFFMSLNPMLIWTLFGTSILLVTSVPVLAAGL 209
Query: 434 TILLTDRNLNTSFFDPAGGGDPILY 508
T+LL DR+ +TSF+ P GGGDPIL+
Sbjct: 210 TLLLLDRHFSTSFYYPEGGGDPILW 234
Score = 44.8 bits (101), Expect = 0.002
Identities = 22/69 (31%), Positives = 34/69 (49%)
Frame = +3
Query: 54 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 233
N +PL++ D++ PR+NN+ + G G G T+YPPLS++
Sbjct: 82 NWFIPLMIKIKDLSMPRLNNLSVWLALGSLFLMCMAFLSSGGLGCGWTMYPPLSNSEFMD 141
Query: 234 GRSVDLAFF 260
G +DLA F
Sbjct: 142 GLPIDLAVF 150
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 60.1 bits (139), Expect = 5e-08
Identities = 29/54 (53%), Positives = 35/54 (64%)
Frame = +3
Query: 54 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 215
N LVPL++GAPD+AFPR+NN+ F VE GAGTG TVYPPL+
Sbjct: 81 NWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLA 134
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 60.1 bits (139), Expect = 5e-08
Identities = 31/54 (57%), Positives = 37/54 (68%)
Frame = +1
Query: 538 EVYILILPGFGIISHIISQERGKKETFGCLGNNLCYTSNWVIRIHCFELHHIFT 699
EVYILILPGFG+ISHIISQE GKKE FG LG + ++ + HH+FT
Sbjct: 155 EVYILILPGFGMISHIISQESGKKEAFGTLGMIYAMMAIGLLGFVVW-AHHMFT 207
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 59.7 bits (138), Expect = 7e-08
Identities = 30/62 (48%), Positives = 37/62 (59%)
Frame = +1
Query: 511 HLF*FFGHPEVYILILPGFGIISHIISQERGKKETFGCLGNNLCYTSNWVIRIHCFELHH 690
HLF FFGHPEVY+LILPGFGI+SHI +FG G +C ++ V HH
Sbjct: 323 HLFWFFGHPEVYVLILPGFGIVSHICMSLSNNDSSFGYYG-LICAMASIVCLGSVVWGHH 381
Query: 691 IF 696
+F
Sbjct: 382 MF 383
Score = 51.2 bits (117), Expect = 2e-05
Identities = 32/84 (38%), Positives = 40/84 (47%)
Frame = +2
Query: 257 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 436
FSLHLAG+SS S + V A T+ A IT
Sbjct: 243 FSLHLAGVSSLIGSVNFISTIFSRLSFNCS-----IIVWAYLFTSVLLLLSLPVLASGIT 297
Query: 437 ILLTDRNLNTSFFDPAGGGDPILY 508
+LL DRN T+FF+P+GGGDPIL+
Sbjct: 298 MLLFDRNFGTAFFEPSGGGDPILF 321
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 59.3 bits (137), Expect = 9e-08
Identities = 47/138 (34%), Positives = 56/138 (40%)
Frame = +2
Query: 41 WRIWKLXXXXXXXXXXXXXPTNK*YKILTPTPLPYIINFKKNCRKWCRNRMNSLPPTFI* 220
W IWKL P NK YKILT PL Y N+ NS P
Sbjct: 28 WWIWKLINSANVSGPWYGFPANKQYKILTSAPLTYTPI----------NKRNSSPLASSI 77
Query: 221 YRT*RKIRRSCFFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXX 400
+ + FSLHLAG+SS + D++PLF+ AV IT
Sbjct: 78 AHAGASVDMA-IFSLHLAGVSSILGSVNFMTTVINMRAKGMTLDRVPLFIWAVFITTVLL 136
Query: 401 XXXXXXXAGAITILLTDR 454
AGAIT+LLTDR
Sbjct: 137 LLSLPVLAGAITMLLTDR 154
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 58.8 bits (136), Expect = 1e-07
Identities = 33/84 (39%), Positives = 41/84 (48%)
Frame = +2
Query: 257 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 436
F++HL GISS SF LF+ A ITA AG +T
Sbjct: 151 FAVHLLGISSILNSINLLGTLFCCRRKFFSFLSWSLFIWAALITAILLIITLPVLAGGVT 210
Query: 437 ILLTDRNLNTSFFDPAGGGDPILY 508
++L DRN NTSF+D GGGD IL+
Sbjct: 211 LILCDRNFNTSFYDVVGGGDLILF 234
Score = 46.0 bits (104), Expect = 9e-04
Identities = 22/69 (31%), Positives = 31/69 (44%)
Frame = +3
Query: 54 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 233
N +P++ G PD+ FPR+NN+ F + E G G G T+YP L H
Sbjct: 83 NYFIPVMAGFPDMVFPRLNNMSFWMYLAGFGCVVNGFLTEEGMGVGWTLYPTLICIDFHS 142
Query: 234 GRSVDLAFF 260
+ D F
Sbjct: 143 SLACDFVMF 151
Score = 46.0 bits (104), Expect = 9e-04
Identities = 18/26 (69%), Positives = 23/26 (88%)
Frame = +1
Query: 511 HLF*FFGHPEVYILILPGFGIISHII 588
H+F FFGHPEVYI++LP FG+IS I+
Sbjct: 236 HIFWFFGHPEVYIILLPVFGLISTIV 261
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 55.6 bits (128), Expect = 1e-06
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = +1
Query: 511 HLF*FFGHPEVYILILPGFGIISHIIS 591
HLF FFGHPEVYILILP FG+ISH+IS
Sbjct: 239 HLFWFFGHPEVYILILPAFGVISHVIS 265
Score = 48.0 bits (109), Expect = 2e-04
Identities = 21/57 (36%), Positives = 33/57 (57%)
Frame = +3
Query: 54 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNI 224
N +P++ G+P++A+PRIN+I E G GTG T+YPPLS+++
Sbjct: 85 NYFLPILCGSPELAYPRINSISLLLQPIAFVLVILSTAAEFGGGTGWTLYPPLSTSL 141
Score = 39.5 bits (88), Expect = 0.078
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +2
Query: 425 GAITILLTDRNLNTSFFDPAGGGDPILY 508
G + +LL+D + NT FFDP GDPILY
Sbjct: 210 GGVLMLLSDLHFNTLFFDPTFAGDPILY 237
>UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1;
Harmonia axyridis|Rep: Cytochrome c oxidase subunit 2 -
Harmonia axyridis (Multicolored Asian lady beetle)
Length = 193
Score = 54.8 bits (126), Expect = 2e-06
Identities = 21/39 (53%), Positives = 26/39 (66%)
Frame = +3
Query: 510 TFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLF 626
+ ++IFW+S SLYFN IWYNF YY+T K K W F
Sbjct: 2 SLVMIFWSSSSLYFNSPSIWYNFPYYYTSKSGKNCLWFF 40
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 54.0 bits (124), Expect = 3e-06
Identities = 26/37 (70%), Positives = 29/37 (78%)
Frame = +1
Query: 511 HLF*FFGHPEVYILILPGFGIISHIISQERGKKETFG 621
HLF FFGHPEVYI+ILPGFGIIS ++S KE FG
Sbjct: 239 HLFWFFGHPEVYIMILPGFGIISLLLSTYT-TKEMFG 274
Score = 44.8 bits (101), Expect = 0.002
Identities = 23/69 (33%), Positives = 37/69 (53%)
Frame = +3
Query: 54 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 233
N L P++LG D+ +PR+N +E G+GTG T+YPPLS+++++
Sbjct: 88 NYLYPVLLGYCDVVYPRVNLYSLLFQPIGFVLVVSSIYLEIGSGTGWTLYPPLSTSLSNV 147
Query: 234 GRSVDLAFF 260
G +D F
Sbjct: 148 G--IDFIIF 154
Score = 35.1 bits (77), Expect = 1.7
Identities = 20/84 (23%), Positives = 33/84 (39%)
Frame = +2
Query: 257 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 436
F L AGI+S D++ ++ +T+F
Sbjct: 154 FGLLAAGIASTLSSVNFITTFTSVKTIGFVIDRISPAAWSIVLTSFLLLLSLPVVTAVFL 213
Query: 437 ILLTDRNLNTSFFDPAGGGDPILY 508
++ DR+ NT FF+ + GDP+LY
Sbjct: 214 MVFLDRHYNTMFFESSNSGDPVLY 237
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 53.2 bits (122), Expect = 6e-06
Identities = 28/82 (34%), Positives = 38/82 (46%)
Frame = +2
Query: 263 LHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITIL 442
LH GI S + DQ+ +FV +T+F AG++ L
Sbjct: 160 LHTVGIGSLLGAINFMVTTQNMRSTAVTLDQISMFVWTSYLTSFLLVLSVPVLAGSLLFL 219
Query: 443 LTDRNLNTSFFDPAGGGDPILY 508
L DRN NTSF+D GG+P+LY
Sbjct: 220 LLDRNFNTSFYDTKKGGNPLLY 241
Score = 52.0 bits (119), Expect = 1e-05
Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +1
Query: 511 HLF*FFGHPEVYILILPGFGIISHIISQERGKKETFGCLGNNLCYTSNWVIRIHCFEL-H 687
HLF FFGHPEVY++ILP FGIIS + K FG ++ + S W+ + H
Sbjct: 243 HLFWFFGHPEVYVIILPVFGIISEAVLFLTDKDRLFG--QTSMTFASIWIAVLGTSVWGH 300
Query: 688 HIFT 699
H++T
Sbjct: 301 HMYT 304
Score = 46.4 bits (105), Expect = 7e-04
Identities = 21/54 (38%), Positives = 30/54 (55%)
Frame = +3
Query: 54 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 215
N ++PL+LGAP++AFPR+N + F + G G+ T YPPLS
Sbjct: 91 NWMLPLMLGAPEMAFPRVNALSFWFTFVALLMVYQSFFIGGGPGSSWTFYPPLS 144
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 52.8 bits (121), Expect = 8e-06
Identities = 29/63 (46%), Positives = 38/63 (60%)
Frame = +1
Query: 511 HLF*FFGHPEVYILILPGFGIISHIISQERGKKETFGCLGNNLCYTSNWVIRIHCFELHH 690
HLF FFGHPEVY++ILP FG+ S I++ K+ FG G C S V+ + HH
Sbjct: 243 HLFWFFGHPEVYVIILPVFGLTSLILTSII-HKDIFGREGMMYCIISIGVVGYFVW-AHH 300
Query: 691 IFT 699
+FT
Sbjct: 301 MFT 303
Score = 37.1 bits (82), Expect = 0.41
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = +3
Query: 54 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXI-VENGAGTG*TVYPPLSSNIAH 230
N L+P+++G +++ PR+N I F + + +G T+YPPLS+ A
Sbjct: 90 NYLIPMLIGTSELSMPRMNGISFWMLIVGVVIFVISNVLMSKPISSGWTLYPPLSTRDAD 149
Query: 231 R-GRSVDLA 254
G ++DL+
Sbjct: 150 NIGVNIDLS 158
Score = 34.7 bits (76), Expect = 2.2
Identities = 22/82 (26%), Positives = 37/82 (45%)
Frame = +2
Query: 263 LHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITIL 442
+H+ GISS +F + ++ ++ +T+ AIT L
Sbjct: 162 VHVLGISSTIGSVNYITTNKYNRHVGLTFMNINIYNFSIIVTSILLIGSLPILGVAITGL 221
Query: 443 LTDRNLNTSFFDPAGGGDPILY 508
L DRN+N++ +D GDP+LY
Sbjct: 222 LLDRNINSTIYDVI--GDPVLY 241
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 52.4 bits (120), Expect = 1e-05
Identities = 28/57 (49%), Positives = 33/57 (57%)
Frame = +3
Query: 54 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNI 224
N LVP+++GAPD+AFPR+NNI F VE GAGTG TV LS I
Sbjct: 80 NYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVKCKLSQII 136
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 51.6 bits (118), Expect = 2e-05
Identities = 25/68 (36%), Positives = 38/68 (55%)
Frame = +1
Query: 496 PNFI*HLF*FFGHPEVYILILPGFGIISHIISQERGKKETFGCLGNNLCYTSNWVIRIHC 675
P H+F FFGHPEVYIL+LP G++S +I Q ++ +G + + I
Sbjct: 238 PRLFQHIFWFFGHPEVYILVLPAMGLVSEVI-QRMARRRAYGYTAIAISSVAIASISFAV 296
Query: 676 FELHHIFT 699
+ +HH+FT
Sbjct: 297 W-MHHMFT 303
Score = 39.9 bits (89), Expect = 0.059
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +3
Query: 54 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIV-ENGAGTG*TVYPPLSS 218
N LVP ++GAPD+ +PRIN + F + ++G G T+YPPLS+
Sbjct: 86 NILVPKLIGAPDMYWPRINALSFWMQVPATVFMWSSLLFWQHGDSIGWTLYPPLST 141
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 51.6 bits (118), Expect = 2e-05
Identities = 30/70 (42%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Frame = +1
Query: 496 PNFI*HLF*FFGHPEVYILILPGFGIISHIISQERGKKETFGCLGNNLCYTSNWVIRIHC 675
P F HLF FFGHPEVY+L+LP GI+S I+ + G+K G S I +
Sbjct: 282 PIFWQHLFWFFGHPEVYVLVLPPMGIVSLILPKFSGRK----LFGFKFVVYSTLAIGVLS 337
Query: 676 FEL--HHIFT 699
F + HH+FT
Sbjct: 338 FGVWAHHMFT 347
Score = 33.5 bits (73), Expect = 5.1
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +3
Query: 54 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVEN--GAGTG*TVYPPLS 215
N +PL++ A D+AFPRIN I F ++ A T T+Y PLS
Sbjct: 135 NYFIPLLIDADDMAFPRINAIAFWLLPPGAILIWSGFLIPGIATAQTSWTMYTPLS 190
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 50.8 bits (116), Expect = 3e-05
Identities = 23/37 (62%), Positives = 27/37 (72%)
Frame = +1
Query: 511 HLF*FFGHPEVYILILPGFGIISHIISQERGKKETFG 621
HLF FFGHPEVYI+ LP FGI+S +IS +K FG
Sbjct: 273 HLFWFFGHPEVYIVALPAFGIVSDLIS-THARKNIFG 308
Score = 35.5 bits (78), Expect = 1.3
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +3
Query: 54 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPP 209
N L+PL++GA D+ FP +N + + V G G G T+YPP
Sbjct: 107 NYLIPLMVGARDMVFPYVNMLSYWVYLLAVLVLASAFFVPGGPTGAGWTLYPP 159
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 50.0 bits (114), Expect = 5e-05
Identities = 27/67 (40%), Positives = 34/67 (50%)
Frame = +3
Query: 60 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 239
L PL +GAP +A PR+ N+ F + G G VYPP SS +AH
Sbjct: 72 LXPLXVGAPXMAXPRLXNMSFWLLPPSLXXLCLSVFIGXGVGXXWXVYPPXSSGLAHSSG 131
Query: 240 SVDLAFF 260
+VDL F
Sbjct: 132 AVDLGIF 138
Score = 33.1 bits (72), Expect = 6.7
Identities = 28/84 (33%), Positives = 32/84 (38%)
Frame = +2
Query: 257 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 436
F LHLAGISS ++ LF A AIT
Sbjct: 138 FXLHLAGISSXLGSMNFLVTLGNMKXKGLNYGNFSLFCWXXVXXXXXLILSXPVLAAAIT 197
Query: 437 ILLTDRNLNTSFFDPAGGGDPILY 508
+L R N SFF P G P +
Sbjct: 198 MLXXXRXXNXSFFXPXXXGXPXXF 221
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 50.0 bits (114), Expect = 5e-05
Identities = 28/62 (45%), Positives = 36/62 (58%)
Frame = +1
Query: 511 HLF*FFGHPEVYILILPGFGIISHIISQERGKKETFGCLGNNLCYTSNWVIRIHCFELHH 690
HLF FFGHPEVY+L LP FGI+S II +K FG +G S + + + HH
Sbjct: 258 HLFWFFGHPEVYVLALPFFGIVSEII-PVFSRKPMFGYVGLIFATLSIGALSMAVW-AHH 315
Query: 691 IF 696
+F
Sbjct: 316 MF 317
Score = 41.5 bits (93), Expect = 0.019
Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +3
Query: 54 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT-G*TVYPPLSSNIAH 230
N ++PL +GAPD+AFPR+N F + GA G T+Y PLS I
Sbjct: 105 NYVLPLQIGAPDVAFPRLNAFGFWITTVGGVAMLTGFLTPGGAADFGWTMYSPLSDAIHS 164
Query: 231 RGRSVDL 251
G D+
Sbjct: 165 PGLGSDM 171
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 49.6 bits (113), Expect = 7e-05
Identities = 20/33 (60%), Positives = 27/33 (81%)
Frame = +1
Query: 511 HLF*FFGHPEVYILILPGFGIISHIISQERGKK 609
HLF FFGHPEVYI++LP GIIS+I+ + G++
Sbjct: 318 HLFWFFGHPEVYIIVLPPMGIISYILPRFSGRR 350
Score = 35.9 bits (79), Expect = 0.96
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = +3
Query: 54 N*LVPLILGAPDIAFPRINNIRF 122
N L+PL++GA D+AFPRIN I F
Sbjct: 161 NYLIPLLIGADDMAFPRINAIAF 183
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 49.2 bits (112), Expect = 1e-04
Identities = 28/64 (43%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +1
Query: 511 HLF*FFGHPEVYILILPGFGIISHIISQERGKKETFGCLGNNLCYTSNWV-IRIHCFELH 687
+LF +GHPEVYIL+LP FGI S ++S GK+ FG ++ Y S + + LH
Sbjct: 278 NLFWAWGHPEVYILVLPAFGIFSEVVSTFAGKR-LFG--HKSMIYASGAISVLGFMVWLH 334
Query: 688 HIFT 699
H FT
Sbjct: 335 HFFT 338
Score = 40.7 bits (91), Expect = 0.034
Identities = 27/72 (37%), Positives = 35/72 (48%)
Frame = +3
Query: 54 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 233
N +VPL +GA D+AFP +N++ F V N A TG YPPL A
Sbjct: 125 NIVVPLQIGARDVAFPFLNSLSFWLLVSAVILVNLSLGVGNFARTGWVAYPPL----AEL 180
Query: 234 GRSVDLAFFHYI 269
G S D+ +YI
Sbjct: 181 GFSPDVGVDYYI 192
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 49.2 bits (112), Expect = 1e-04
Identities = 20/26 (76%), Positives = 22/26 (84%)
Frame = +1
Query: 511 HLF*FFGHPEVYILILPGFGIISHII 588
HLF FFGHPEVYI ILP GI+SHI+
Sbjct: 281 HLFWFFGHPEVYIAILPAMGIVSHIL 306
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 48.8 bits (111), Expect = 1e-04
Identities = 25/62 (40%), Positives = 36/62 (58%)
Frame = +1
Query: 514 LF*FFGHPEVYILILPGFGIISHIISQERGKKETFGCLGNNLCYTSNWVIRIHCFELHHI 693
LF FFGHPEVYILILP G++S ++ + ++E FG L + + +HH+
Sbjct: 232 LFWFFGHPEVYILILPAMGLVSELL-PKMARREIFGYTAIALSSIAIAFLSALGVWMHHM 290
Query: 694 FT 699
FT
Sbjct: 291 FT 292
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 48.8 bits (111), Expect = 1e-04
Identities = 28/64 (43%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +1
Query: 511 HLF*FFGHPEVYILILPGFGIISHIISQERGKKETFGCLGNNLCYTSNWVIRI-HCFELH 687
+LF +GHPEVYILILP FG+ S + S GK+ FG +++ Y S + + LH
Sbjct: 277 NLFWAWGHPEVYILILPAFGVFSEVTSTFAGKR-LFG--HHSMIYASGAIAVLGFAVWLH 333
Query: 688 HIFT 699
H FT
Sbjct: 334 HFFT 337
Score = 36.3 bits (80), Expect = 0.72
Identities = 23/65 (35%), Positives = 29/65 (44%)
Frame = +3
Query: 54 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 233
N VPL +GA D+AFP +N++ F V A TG YPPL+
Sbjct: 124 NLAVPLQIGARDVAFPFLNSLSFYLLLAGVLLVNISLGVGEFAKTGWVAYPPLAGIQYSP 183
Query: 234 GRSVD 248
G VD
Sbjct: 184 GVGVD 188
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 48.4 bits (110), Expect = 2e-04
Identities = 24/62 (38%), Positives = 37/62 (59%)
Frame = +1
Query: 511 HLF*FFGHPEVYILILPGFGIISHIISQERGKKETFGCLGNNLCYTSNWVIRIHCFELHH 690
HLF FFGHPEVYI+ LP G++S I++ ++ FG L + + V+ + +HH
Sbjct: 249 HLFWFFGHPEVYIIFLPAVGMVSSIVATFT-QRPVFGYLAMVMALIATGVLAFGLW-VHH 306
Query: 691 IF 696
+F
Sbjct: 307 MF 308
Score = 43.6 bits (98), Expect = 0.005
Identities = 22/55 (40%), Positives = 33/55 (60%)
Frame = +2
Query: 344 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY 508
S D++PLFV ++ +T+F A T L+ DR + T FF+PA GGD +L+
Sbjct: 193 SLDRIPLFVWSMLVTSFLVILAMPAIMIASTSLILDRLVGTHFFNPAEGGDVLLW 247
Score = 35.1 bits (77), Expect = 1.7
Identities = 20/64 (31%), Positives = 27/64 (42%)
Frame = +3
Query: 60 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 239
LVPL++G IAFPR+N + V+ G G Y PLS G+
Sbjct: 98 LVPLMVGTRHIAFPRLNAFSYWMYLAGGLLLWIAFAVDTGPDIGWFAYVPLSGPQYAAGK 157
Query: 240 SVDL 251
D+
Sbjct: 158 RADI 161
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 48.0 bits (109), Expect = 2e-04
Identities = 20/26 (76%), Positives = 22/26 (84%)
Frame = +1
Query: 511 HLF*FFGHPEVYILILPGFGIISHII 588
H F FGHPEVYILILPGFG+IS +I
Sbjct: 252 HYFWIFGHPEVYILILPGFGMISEVI 277
Score = 37.1 bits (82), Expect = 0.41
Identities = 21/65 (32%), Positives = 29/65 (44%)
Frame = +3
Query: 54 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 233
N VPL++GA D+AFPR+N+ F + + G Y PLSS
Sbjct: 99 NYFVPLMIGARDVAFPRLNSFGFWMFFFGAALLHFSFLTGSAPNAGWFSYVPLSSKAYSS 158
Query: 234 GRSVD 248
+ VD
Sbjct: 159 LQGVD 163
Score = 37.1 bits (82), Expect = 0.41
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = +2
Query: 344 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY 508
S ++PLFV + + A A+ +LL DR L ++FFDP GG +L+
Sbjct: 196 SLQRVPLFVWMMLMQAILIILALPALNSALAMLLIDRWLGSAFFDPTRGGSAVLW 250
>UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6;
Digenea|Rep: Cytochrome c oxidase subunit I -
Echinostoma hortense
Length = 154
Score = 48.0 bits (109), Expect = 2e-04
Identities = 21/36 (58%), Positives = 23/36 (63%)
Frame = +1
Query: 523 FFGHPEVYILILPGFGIISHIISQERGKKETFGCLG 630
FFGHPEVY+LILP FGI+SHI FG G
Sbjct: 1 FFGHPEVYVLILPVFGIVSHICMTFTNNDSLFGYYG 36
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 47.6 bits (108), Expect = 3e-04
Identities = 23/37 (62%), Positives = 26/37 (70%)
Frame = +1
Query: 511 HLF*FFGHPEVYILILPGFGIISHIISQERGKKETFG 621
HLF FFGHPEVYILILP GIIS ++ +K FG
Sbjct: 251 HLFWFFGHPEVYILILPTMGIISEVL-PTFSRKPIFG 286
Score = 33.1 bits (72), Expect = 6.7
Identities = 19/55 (34%), Positives = 27/55 (49%)
Frame = +2
Query: 344 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY 508
+ +++PLFV + AF A LL DR+ T FF P GGD +L+
Sbjct: 195 TLNRMPLFVWMQLVVAFILIFAFPVLTVATIQLLFDRHFGTRFFLPNLGGDAVLW 249
Score = 32.7 bits (71), Expect = 8.9
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = +3
Query: 54 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 215
N +VPL++GA D+AFPR+N + V G Y PL+
Sbjct: 98 NYMVPLMIGARDMAFPRLNALSIWLFIFGGLMLYVSFFVGGAPNVGWFAYAPLT 151
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 47.6 bits (108), Expect = 3e-04
Identities = 23/37 (62%), Positives = 25/37 (67%)
Frame = +1
Query: 511 HLF*FFGHPEVYILILPGFGIISHIISQERGKKETFG 621
HLF FGHPEVYILILP FGI S +I +K FG
Sbjct: 242 HLFWIFGHPEVYILILPAFGIFSEVI-PVFARKRLFG 277
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 47.2 bits (107), Expect = 4e-04
Identities = 31/68 (45%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Frame = +1
Query: 502 FI*HLF*FFGHPEVYILILPGFGIISHIISQERGKKETFGCLGNNLCYTSNWVIRIHCFE 681
F HLF FGHPEVYILILP GIIS +I +K F G ++ S +I F
Sbjct: 250 FYQHLFWTFGHPEVYILILPAMGIISEVI-PVHARKMLF---GYSVMVFSTALIGFMGFT 305
Query: 682 L--HHIFT 699
+ HH+FT
Sbjct: 306 VWSHHMFT 313
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 47.2 bits (107), Expect = 4e-04
Identities = 27/84 (32%), Positives = 38/84 (45%)
Frame = +2
Query: 257 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 436
F +HL G SS +F + LFV + AGA+T
Sbjct: 104 FVMHLLGASSIATAVNFLVTYITMRAPGYTFFKTNLFVHTLIAANVIQLVGVPSLAGAVT 163
Query: 437 ILLTDRNLNTSFFDPAGGGDPILY 508
+L D+ L T+FF+PA GGDP++Y
Sbjct: 164 MLFLDKYLGTNFFNPAKGGDPLIY 187
Score = 37.9 bits (84), Expect = 0.24
Identities = 21/56 (37%), Positives = 28/56 (50%)
Frame = +3
Query: 54 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSN 221
N L+PL++GA D+AFPR+N + + I N T T YPP S N
Sbjct: 38 NFLLPLMIGAKDVAFPRLNALSWWAFFAANVLFLMTLIPGNHIMTMWTGYPPFSLN 93
Score = 33.5 bits (73), Expect = 5.1
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +1
Query: 511 HLF*FFGHPEVYILILPGFGIISHII 588
++F F+ HP VY+ +LP FG S II
Sbjct: 189 NIFWFYSHPVVYVQVLPVFGFYSEII 214
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 47.2 bits (107), Expect = 4e-04
Identities = 30/67 (44%), Positives = 37/67 (55%)
Frame = +1
Query: 499 NFI*HLF*FFGHPEVYILILPGFGIISHIISQERGKKETFGCLGNNLCYTSNWVIRIHCF 678
NF+ ++F FGHPEVYILILP FG+ S I S G K FG + + T +
Sbjct: 294 NFL-NMFWLFGHPEVYILILPAFGVYSEIFSTFSG-KVLFG-YKSLVWATISIAFLSFLV 350
Query: 679 ELHHIFT 699
LHH FT
Sbjct: 351 WLHHFFT 357
Score = 33.5 bits (73), Expect = 5.1
Identities = 20/65 (30%), Positives = 30/65 (46%)
Frame = +3
Query: 54 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 233
N +VPL +GA D+AFP +N+I +V + G YPP + + +
Sbjct: 144 NYVVPLQIGARDVAFPILNSISLWLTAAGAALVMISLVVGAFSTGGWFGYPPYTETLYNP 203
Query: 234 GRSVD 248
G VD
Sbjct: 204 GIGVD 208
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 47.2 bits (107), Expect = 4e-04
Identities = 20/35 (57%), Positives = 23/35 (65%)
Frame = +1
Query: 370 MSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF 474
M C +YS +TC WSYYN IN SKLKYI+F
Sbjct: 84 MICSNYSFTIIIVSTCSCWSYYNTINWSKLKYILF 118
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 46.4 bits (105), Expect = 7e-04
Identities = 26/57 (45%), Positives = 32/57 (56%)
Frame = +3
Query: 54 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNI 224
N L+PL+LGA D+AF R+NNI F +VE GAGTG TV SS +
Sbjct: 86 NYLMPLMLGASDMAFARLNNISFWLLVPSLILILTSALVEAGAGTGWTVKKICSSKM 142
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 46.0 bits (104), Expect = 9e-04
Identities = 28/84 (33%), Positives = 40/84 (47%)
Frame = +2
Query: 257 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 436
FSLHLAGI+S + L LF ++ + + A IT
Sbjct: 134 FSLHLAGIASLISSCNFLVTMLATRTSL--WYSLSLFCWSIVLVSLLLVLSLPVLAVGIT 191
Query: 437 ILLTDRNLNTSFFDPAGGGDPILY 508
++LTD++L T F+D GGDP+LY
Sbjct: 192 LILTDKHLGTCFYDATMGGDPLLY 215
Score = 43.6 bits (98), Expect = 0.005
Identities = 18/26 (69%), Positives = 21/26 (80%)
Frame = +1
Query: 511 HLF*FFGHPEVYILILPGFGIISHII 588
HLF FFGHPEVY++ILP FG+ S I
Sbjct: 217 HLFWFFGHPEVYVVILPVFGLFSSSI 242
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 46.0 bits (104), Expect = 9e-04
Identities = 18/33 (54%), Positives = 24/33 (72%)
Frame = +1
Query: 511 HLF*FFGHPEVYILILPGFGIISHIISQERGKK 609
HLF FFGHPEVY+LI+P FG I+ I+ ++
Sbjct: 394 HLFWFFGHPEVYVLIIPTFGFINMIVPHNNTRR 426
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 45.6 bits (103), Expect = 0.001
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = +1
Query: 511 HLF*FFGHPEVYILILPGFGIISHIISQERGKKETFGCLGNNLCYTSNWVIRIHCFEL-H 687
HLF F+ HP VYI++LP FG++S +++ +K FG + Y+S + + F H
Sbjct: 259 HLFWFYSHPAVYIMVLPSFGVMSEVVA-TYSRKNIFGY--RAVAYSSLGIAFVGFFAWGH 315
Query: 688 HIF 696
H+F
Sbjct: 316 HMF 318
Score = 35.5 bits (78), Expect = 1.3
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +3
Query: 54 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSN 221
N ++PL+LGA D+AFPR+N + ++ G TG T Y P S++
Sbjct: 110 NFMLPLMLGAKDVAFPRLNLLSL-YIYLAGAVLALWGMLNGGLDTGWTFYTPYSAH 164
Score = 35.1 bits (77), Expect = 1.7
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 353 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNL-NTSFFDPAGGGDPILY 508
++PLFV A+ T+ G + +L+T NL FDPA GGDP+L+
Sbjct: 206 KMPLFVWAIYATS-CIQVLATPVIGLLLVLVTVENLFGFGMFDPARGGDPVLF 257
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 45.6 bits (103), Expect = 0.001
Identities = 21/49 (42%), Positives = 29/49 (59%)
Frame = +3
Query: 54 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 200
N VP+++G+PD+AFPR+NNI F +VE G G+G TV
Sbjct: 84 NWFVPILIGSPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGCGSGWTV 132
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 45.6 bits (103), Expect = 0.001
Identities = 22/37 (59%), Positives = 27/37 (72%)
Frame = +1
Query: 511 HLF*FFGHPEVYILILPGFGIISHIISQERGKKETFG 621
+LF +GHPEVYI+ILP FGI S IIS +K+ FG
Sbjct: 273 NLFWIWGHPEVYIVILPAFGIFSEIIS-SFARKQLFG 308
Score = 40.7 bits (91), Expect = 0.034
Identities = 20/56 (35%), Positives = 28/56 (50%)
Frame = +3
Query: 54 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSN 221
N +VPL +GA D+AFP +NN+ F ++ G T Y PL+SN
Sbjct: 120 NVVVPLQIGARDVAFPYLNNLSFWTFFVGAMLFNISFVIGGSPNAGWTSYMPLASN 175
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 45.6 bits (103), Expect = 0.001
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +1
Query: 511 HLF*FFGHPEVYILILPGFGIISHIISQERGK 606
HLF FFGHPEVYIL+ P G ++ +IS GK
Sbjct: 241 HLFWFFGHPEVYILLFPALGAMADVISTFSGK 272
Score = 44.4 bits (100), Expect = 0.003
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +3
Query: 54 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGA-GTG*TVYPPLSSNIAH 230
N +VPL +GA D+AFPR+N + + E+GA G T+Y PL++ I
Sbjct: 88 NYIVPLQIGARDLAFPRLNALSYWLYLLSGLVLLASFFTESGAPNVGWTLYAPLTARIYT 147
Query: 231 RGRSVDLA 254
G +DLA
Sbjct: 148 PGIGLDLA 155
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 44.8 bits (101), Expect = 0.002
Identities = 25/63 (39%), Positives = 36/63 (57%)
Frame = +1
Query: 511 HLF*FFGHPEVYILILPGFGIISHIISQERGKKETFGCLGNNLCYTSNWVIRIHCFELHH 690
HLF FFGHPEVYI+ +P G++S II ++ FG + L + I + +HH
Sbjct: 255 HLFWFFGHPEVYIIFIPALGMVSSIIITFT-QRPIFGYIPIVLSIVAIGFIGFGLW-VHH 312
Query: 691 IFT 699
+FT
Sbjct: 313 MFT 315
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 44.8 bits (101), Expect = 0.002
Identities = 22/49 (44%), Positives = 30/49 (61%)
Frame = +3
Query: 54 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 200
N L+PL++GA D++F R+NNI F +VE+GAGTG TV
Sbjct: 81 NYLLPLMIGASDMSFARLNNISFWLLPPALVCLVTSTLVESGAGTGWTV 129
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 44.8 bits (101), Expect = 0.002
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +1
Query: 511 HLF*FFGHPEVYILILPGFGIISHIISQERGKKETFGCLGNNLCYTSNWVIRIHCFE-LH 687
HLF F+ HP VYI+ILP FG+IS +I +K FG + Y+S + + H
Sbjct: 244 HLFWFYSHPAVYIMILPFFGVISEVI-PVHARKPIFGY--RAIAYSSLAISFLGLIVWAH 300
Query: 688 HIFT 699
H+FT
Sbjct: 301 HMFT 304
Score = 41.5 bits (93), Expect = 0.019
Identities = 26/83 (31%), Positives = 34/83 (40%)
Frame = +2
Query: 260 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 439
SL L G SS +PLF A+ T+ A A+ +
Sbjct: 160 SLLLVGTSSILGAINFVTTILKMRIKDMDLHSMPLFCWAMLATSSLILLSTPVLASALIL 219
Query: 440 LLTDRNLNTSFFDPAGGGDPILY 508
L D TSFF+P GGGDP++Y
Sbjct: 220 LSFDLIAGTSFFNPVGGGDPVVY 242
Score = 36.3 bits (80), Expect = 0.72
Identities = 20/54 (37%), Positives = 26/54 (48%)
Frame = +3
Query: 54 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 215
N L+PL++G D+AFPR+N + F V G T YPPLS
Sbjct: 94 NYLIPLMVGTEDMAFPRLNAVAFWLTPPGGILLISSFFV-GAPQAGWTSYPPLS 146
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 44.0 bits (99), Expect = 0.004
Identities = 17/27 (62%), Positives = 22/27 (81%)
Frame = +1
Query: 511 HLF*FFGHPEVYILILPGFGIISHIIS 591
HLF FGHPEVYI+ILP +GI+ ++S
Sbjct: 271 HLFWIFGHPEVYIMILPAWGILGDVLS 297
Score = 43.2 bits (97), Expect = 0.006
Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +3
Query: 54 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPPLSSNIAH 230
N L+PL++GA D+AFPR+N F G AG G T Y PLS+N+
Sbjct: 112 NLLIPLMIGARDMAFPRLNMYSFWTFLLSQLLVLASFFAPLGSAGAGWTTYTPLSTNVGM 171
Query: 231 RG 236
G
Sbjct: 172 PG 173
Score = 33.9 bits (74), Expect = 3.9
Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 5/88 (5%)
Frame = +2
Query: 260 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 439
++ + G+SS ++ +LPL + + +TA A +
Sbjct: 182 AIFVTGVSSTMGAVNYITTVIRLRAPGMTYMRLPLTIWGLWLTAILNALFVPVLGSAALL 241
Query: 440 LLTDRNLNTSFFDPA-----GGGDPILY 508
LL DR+ T FF GGGDPIL+
Sbjct: 242 LLLDRSFGTEFFVAGASAVRGGGDPILW 269
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 44.0 bits (99), Expect = 0.004
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = +1
Query: 511 HLF*FFGHPEVYILILPGFGIISHIISQERGKKETFG 621
HLF F GHPEVYI+++P GI S +I+ +K FG
Sbjct: 295 HLFWFLGHPEVYIVLIPALGITSEVIA-TNARKPIFG 330
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 43.6 bits (98), Expect = 0.005
Identities = 17/26 (65%), Positives = 21/26 (80%)
Frame = +1
Query: 511 HLF*FFGHPEVYILILPGFGIISHII 588
HLF FFGHPEVYI+ LP G++S I+
Sbjct: 259 HLFWFFGHPEVYIIFLPAAGLVSMIV 284
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 43.2 bits (97), Expect = 0.006
Identities = 17/26 (65%), Positives = 21/26 (80%)
Frame = +1
Query: 511 HLF*FFGHPEVYILILPGFGIISHII 588
HLF FFGHPEVYI+ LP G++S I+
Sbjct: 318 HLFWFFGHPEVYIIFLPAAGMVSMIV 343
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 42.7 bits (96), Expect = 0.008
Identities = 28/59 (47%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +1
Query: 526 FGHPEVYILILPGFGIISHIISQERGKKETFGCLGNNLCY-TSNWVIRIHCFELHHIFT 699
+GHPEVYILILP FGI S IIS K F + +L Y T + + LHH FT
Sbjct: 277 WGHPEVYILILPSFGIFSEIISY-ICVKSVFSYI--SLIYATISITVLSFLVWLHHFFT 332
Score = 37.1 bits (82), Expect = 0.41
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = +3
Query: 54 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 215
N ++PL +G+ D+AFP +N + F I+ A TG YPPLS
Sbjct: 119 NIIIPLQIGSKDVAFPSLNLLSFWLTFFSVLLINISLIIGEFAKTGWLGYPPLS 172
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 42.7 bits (96), Expect = 0.008
Identities = 19/32 (59%), Positives = 22/32 (68%)
Frame = +3
Query: 165 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAFF 260
+VE G G G TVYPPL+S + H G SVD A F
Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIF 43
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 41.9 bits (94), Expect = 0.015
Identities = 23/53 (43%), Positives = 29/53 (54%)
Frame = +2
Query: 350 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY 508
DQ+ LF ++ IT AG IT+LL+DRN N FF GG PIL+
Sbjct: 12 DQINLFSWSISITVNLSILSLPMLAGTITMLLSDRNFNKFFFILIGGEYPILH 64
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 41.5 bits (93), Expect = 0.019
Identities = 27/84 (32%), Positives = 36/84 (42%)
Frame = +2
Query: 257 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 436
F L + GISS S Q+PL + ++ A A+
Sbjct: 150 FGLKILGISSILGSINFIVTILKCKHPDMSLGQVPLLAWSYLSSSLIVLVALPTFAAALL 209
Query: 437 ILLTDRNLNTSFFDPAGGGDPILY 508
+LLTDR + FF+PA GGDPI Y
Sbjct: 210 MLLTDRLGVSGFFNPAVGGDPIAY 233
Score = 34.3 bits (75), Expect = 2.9
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +1
Query: 511 HLF*FFGHPEVYILILPGFGIISHII 588
HLF F HPEVY+L++P G++ ++
Sbjct: 235 HLFWFTFHPEVYVLVIPAIGMMYEMV 260
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 41.1 bits (92), Expect = 0.025
Identities = 24/80 (30%), Positives = 32/80 (40%)
Frame = +2
Query: 269 LAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLT 448
L+GISS F ++P+FV G +LL
Sbjct: 178 LSGISSIMGAINFVTTIIRMRAPGMGFFRMPVFVWTAWAAQTIQLIGLPALTGGAVMLLF 237
Query: 449 DRNLNTSFFDPAGGGDPILY 508
D + TSFF P GGGDP+L+
Sbjct: 238 DLSFGTSFFRPEGGGDPVLF 257
Score = 38.3 bits (85), Expect = 0.18
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = +1
Query: 511 HLF*FFGHPEVYILILPGFGIISHIISQERGKKETFG 621
H F F+ HP VY+L+LP FGI S + +K FG
Sbjct: 259 HFFWFYSHPAVYVLVLPVFGIFSELF-PVYARKPLFG 294
Score = 36.7 bits (81), Expect = 0.55
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +3
Query: 54 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPPLS 215
N L+P ++GAPD+AFP++N F G A +G YPP+S
Sbjct: 103 NLLIPTMIGAPDMAFPKLNAAAFWLVPVFSIVLMGSFFAPGGPASSGWWSYPPMS 157
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 41.1 bits (92), Expect = 0.025
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +1
Query: 511 HLF*FFGHPEVYILILPGFGIISHIISQERGKKETFGCLGNNLCYTSNWVIRIHCFEL-H 687
H F F+ HP VYI++LP +IS ++ +K FG + Y+S + + F H
Sbjct: 252 HFFWFYSHPAVYIMVLPAMAVISEVVC-AFSRKNIFGY--KAVAYSSLGIAFVGFFTWGH 308
Query: 688 HIFT 699
H+FT
Sbjct: 309 HMFT 312
Score = 39.5 bits (88), Expect = 0.078
Identities = 20/55 (36%), Positives = 31/55 (56%)
Frame = +3
Query: 54 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSS 218
N L+P+++GA D+AFP++N + F +V+ GA TG T Y P S+
Sbjct: 103 NFLLPIMIGAKDVAFPKLNLLSF-YVYLAGAVVALFGMVQGGADTGWTFYTPYST 156
Score = 33.5 bits (73), Expect = 5.1
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +2
Query: 353 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY 508
+LPLFV ++ T+ ++ ++ + FDPA GGDP+L+
Sbjct: 199 RLPLFVWSIYATSVIQILATPVLGMSLLLVAVEHAFGWGIFDPARGGDPVLF 250
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 41.1 bits (92), Expect = 0.025
Identities = 27/69 (39%), Positives = 33/69 (47%)
Frame = +3
Query: 54 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 233
N LVPL+LGAPD+AFPR+NN+ F + G + PL
Sbjct: 64 NWLVPLMLGAPDMAFPRMNNMSFGFFPLHWHYYSFFTV--KGGLARDELSTPLYLVTISA 121
Query: 234 GRSVDLAFF 260
G SVDLA F
Sbjct: 122 GPSVDLAIF 130
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 41.1 bits (92), Expect = 0.025
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +1
Query: 511 HLF*FFGHPEVYILILPGFGIISHIISQERGKKETFGCLGNNLCYTSNWVIRIHCFE--L 684
HLF FFGHPEVYI+ P G+++ G++ +G S ++ + F +
Sbjct: 255 HLFWFFGHPEVYIVFFPALGVMAECFQTFTGRR----LVGRKWFIISMVLVALQSFVVWM 310
Query: 685 HHIF 696
HH+F
Sbjct: 311 HHMF 314
Score = 33.1 bits (72), Expect = 6.7
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = +3
Query: 54 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSS 218
N LVPL +GA D+AFPR+N + + G T+Y PL++
Sbjct: 89 NYLVPLQIGADDLAFPRLNALSYWLYLFSGILMGVSFFQGTTFAGGWTMYAPLNT 143
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 40.7 bits (91), Expect = 0.034
Identities = 26/65 (40%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +1
Query: 511 HLF*FFGHPEVYILILPGFGIISHIISQERGKKETFGCLGNNLCYTSNWVIRIHCFEL-- 684
HLF FGHPEVYI+ LP G IS I+ G LG + + + F L
Sbjct: 249 HLFWLFGHPEVYIIFLPAAGAISTILP----VMARTGLLGYGWIVAAAVALGVLSFGLWV 304
Query: 685 HHIFT 699
HH+FT
Sbjct: 305 HHMFT 309
Score = 33.5 bits (73), Expect = 5.1
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = +3
Query: 60 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 239
L+P +LG+ D+AFPR+ F + +G +YPPLSS + G
Sbjct: 98 LLPKLLGSRDLAFPRLTAYGFWCYVFGGSMMIFSLLWGIAPDSGWFMYPPLSSTLGAPGI 157
Query: 240 SVD 248
+ D
Sbjct: 158 NSD 160
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 39.9 bits (89), Expect = 0.059
Identities = 17/26 (65%), Positives = 19/26 (73%)
Frame = +1
Query: 511 HLF*FFGHPEVYILILPGFGIISHII 588
HLF FGHPEVYI+ LP G IS I+
Sbjct: 249 HLFWLFGHPEVYIIFLPAAGAISTIL 274
Score = 32.7 bits (71), Expect = 8.9
Identities = 17/63 (26%), Positives = 30/63 (47%)
Frame = +3
Query: 60 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 239
L+P +LG+ D+A+PR++ F + +G +YPPL+S + G
Sbjct: 98 LLPKMLGSRDLAYPRLSAYGFWCYVLGGSMLIVALLAGIAPDSGWFMYPPLASTLGSPGI 157
Query: 240 SVD 248
+ D
Sbjct: 158 NSD 160
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 39.9 bits (89), Expect = 0.059
Identities = 15/27 (55%), Positives = 21/27 (77%)
Frame = +1
Query: 511 HLF*FFGHPEVYILILPGFGIISHIIS 591
HLF F+ HP VYI+ILP G++S I++
Sbjct: 282 HLFWFYSHPAVYIMILPAMGMVSDILA 308
Score = 38.7 bits (86), Expect = 0.14
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +3
Query: 54 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVE-NGAGTG*TVYPPLS 215
N L+PL++GA D+AFP +N + + + +GA G T YPPLS
Sbjct: 114 NFLIPLMIGADDMAFPTLNMLSYWFMWPAFFFFGGAFFCDGHGAAAGWTSYPPLS 168
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 39.5 bits (88), Expect = 0.078
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +1
Query: 511 HLF*FFGHPEVYILILPGFGIISHII 588
+LF +GHPEVY ++LP FG IS II
Sbjct: 296 NLFWIWGHPEVYFVVLPAFGFISEII 321
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 39.1 bits (87), Expect = 0.10
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +1
Query: 511 HLF*FFGHPEVYILILPGFGIISHIISQERGK 606
HLF FGHPEVYI+ LP G+++ ++ GK
Sbjct: 275 HLFWLFGHPEVYIIFLPAAGMVATMLPTFVGK 306
Score = 32.7 bits (71), Expect = 8.9
Identities = 17/63 (26%), Positives = 28/63 (44%)
Frame = +3
Query: 60 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 239
L+PL++GA D+ FPR+ + + + G +Y PLS++ G
Sbjct: 124 LIPLMIGARDLVFPRLGAFGYYCYLFGGIIVLSSFLFDAAPDGGWFMYVPLSTSAYTEGL 183
Query: 240 SVD 248
S D
Sbjct: 184 SAD 186
>UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1;
Pachymerium ferrugineum|Rep: Cytochrome oxidase subunit
I - Pachymerium ferrugineum
Length = 219
Score = 38.3 bits (85), Expect = 0.18
Identities = 20/44 (45%), Positives = 23/44 (52%)
Frame = +2
Query: 98 PTNK*YKILTPTPLPYIINFKKNCRKWCRNRMNSLPPTFI*YRT 229
P NK +KIL TPL Y N C K C + +NSLP Y T
Sbjct: 79 PPNKQFKILIITPLTYTTNSIYGCSKRCSHSVNSLPAPCCKYLT 122
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 37.9 bits (84), Expect = 0.24
Identities = 15/27 (55%), Positives = 21/27 (77%)
Frame = +1
Query: 511 HLF*FFGHPEVYILILPGFGIISHIIS 591
+LF +FGHPEVY+L+LPG G + +S
Sbjct: 262 NLFWYFGHPEVYLLLLPGTGAMFDYLS 288
Score = 33.5 bits (73), Expect = 5.1
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +3
Query: 60 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPPLSS 218
L+PL +G+ D+ +PR+N + + + G TG TVY PLSS
Sbjct: 111 LIPLAIGSRDMIYPRMNALGYWLFLFSGIMLWSGFFLPGGNLDTGWTVYEPLSS 164
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 37.5 bits (83), Expect = 0.31
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = +1
Query: 511 HLF*FFGHPEVYILILPGFGIISHIIS 591
HLF F+ HP VYI++LP G++S ++S
Sbjct: 285 HLFWFYSHPAVYIMLLPIMGMVSDMLS 311
Score = 34.7 bits (76), Expect = 2.2
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +3
Query: 54 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 215
N L+PL++GA D+AFP++N + + G G T YP L+
Sbjct: 118 NFLIPLMIGADDMAFPKLNMLSYWFMWPAIACFGMSFKYAGGPAAGWTSYPVLA 171
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 36.7 bits (81), Expect = 0.55
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +1
Query: 517 F*FFGHPEVYILILPGFGIISHIISQERGKKETFGCLGNNLCYTSNWVIRIHCFE-LHHI 693
F F+ HP VY+++LP GI + + S +K FG + Y+ ++ + C LHH+
Sbjct: 253 FWFYSHPAVYVMLLPYLGIGAEVAS-TMARKPLFGY--RVMVYSMLAIVLVSCIVWLHHM 309
Query: 694 F 696
F
Sbjct: 310 F 310
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 36.3 bits (80), Expect = 0.72
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +1
Query: 493 RPNFI*HLF*FFGHPEVYILILPGFGIIS 579
RP HLF F HP VY+++LP GI+S
Sbjct: 263 RPLLWQHLFWMFAHPWVYVVVLPAMGIVS 291
Score = 34.7 bits (76), Expect = 2.2
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = +2
Query: 344 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY 508
S D+LP+ V + + A +L DRN T FFD A GG P+L+
Sbjct: 213 SIDRLPIIVWGTLTASVSNLVAVPSVSLAFLLLWLDRNAGTHFFDVAHGGRPLLW 267
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 35.5 bits (78), Expect = 1.3
Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG-AI 433
FS+ L G +S +++L +FV A + AF G A+
Sbjct: 148 FSVLLLGFASILGGVNFLTTVTFMRAPGIGWNKLNIFVWAT-LAAFVLQLIFVPVLGTAV 206
Query: 434 TILLTDRNLNTSFFDPAGGGDPILY 508
T+L D+ + T FFD A GGD + Y
Sbjct: 207 TMLTFDKYIGTHFFDAAAGGDALTY 231
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 35.5 bits (78), Expect = 1.3
Identities = 15/52 (28%), Positives = 29/52 (55%)
Frame = +2
Query: 353 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY 508
++P++V +V + A ++L +R + S+F+PA GGDP+L+
Sbjct: 190 KMPIYVWSVFAASVLNLFSLAGLTAATLLVLLERKIGLSWFNPAVGGDPVLF 241
Score = 33.1 bits (72), Expect = 6.7
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +1
Query: 517 F*FFGHPEVYILILPGFGIISHIISQERGKKETFG 621
F F+ HP VY+++LP GI++ + S +K FG
Sbjct: 245 FWFYSHPTVYVMLLPYLGILAEVAS-TFARKPLFG 278
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 35.1 bits (77), Expect = 1.7
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +1
Query: 511 HLF*FFGHPEVYILILPGFGIISHII 588
HLF FGHPEVYI+ LP + + I+
Sbjct: 275 HLFWIFGHPEVYIIFLPLIALAAMIV 300
>UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2;
Eutetramorium sp. BLF m1|Rep: Cytochrome c oxidase
subunit I - Eutetramorium sp. BLF m1
Length = 201
Score = 35.1 bits (77), Expect = 1.7
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +2
Query: 344 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNT 466
+ D++ L ++ ITA AGAIT+LLTDRN+NT
Sbjct: 161 TMDKISLLSWSILITAVLLLLSLPVLAGAITMLLTDRNMNT 201
>UniRef50_Q2Y5N3 Cluster: Integral membrane proteins containing
uncharacterized repeats-like precursor; n=3;
Nitrosospira multiformis ATCC 25196|Rep: Integral
membrane proteins containing uncharacterized
repeats-like precursor - Nitrosospira multiformis
(strain ATCC 25196 / NCIMB 11849)
Length = 433
Score = 34.7 bits (76), Expect = 2.2
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +1
Query: 535 PEVYILILPGFGIISHIISQERGKK 609
PE+Y LILPG G++ I Q++ KK
Sbjct: 407 PEIYALILPGLGLVGFIARQKKAKK 431
>UniRef50_Q5ABE2 Cluster: Putative uncharacterized protein CLN3;
n=1; Candida albicans|Rep: Putative uncharacterized
protein CLN3 - Candida albicans (Yeast)
Length = 785
Score = 33.1 bits (72), Expect = 6.7
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = -1
Query: 510 LYKIGSPPPAGSKNDVFKFRSVNN---IVIAPAKTGSDNNNKNAVIPTAH 370
+Y++ +PP + +KN K S NN IA T ++NNN N+ +P H
Sbjct: 571 VYQMVTPPNSANKNSN-KSNSANNNNTTTIATTTTTTNNNNNNSQLPAPH 619
>UniRef50_Q8II85 Cluster: Putative uncharacterized protein; n=2;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 1420
Score = 32.7 bits (71), Expect = 8.9
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -1
Query: 453 RSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKGN*SNDILFN 331
+++NN +I S NNN N++ T TN + +N+I +N
Sbjct: 1038 KTINNNIINDTSQSSYNNNMNSIQNTNRTNSSSSNNNISYN 1078
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 517,877,561
Number of Sequences: 1657284
Number of extensions: 9454317
Number of successful extensions: 21167
Number of sequences better than 10.0: 106
Number of HSP's better than 10.0 without gapping: 19377
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21000
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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