Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20793
(696 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50109-13|CAD44092.1| 1549|Caenorhabditis elegans Hypothetical p... 29 2.4
Z50109-12|CAD44091.1| 1583|Caenorhabditis elegans Hypothetical p... 29 2.4
Z50109-11|CAD91624.1| 1520|Caenorhabditis elegans Hypothetical p... 29 2.4
Z50109-10|CAD89729.3| 1654|Caenorhabditis elegans Hypothetical p... 29 2.4
Z47810-5|CAD44133.1| 1549|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z47810-4|CAD44132.1| 1583|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z47810-3|CAD91632.1| 1520|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z47810-2|CAD89730.3| 1654|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z47810-1|CAD91631.1| 1234|Caenorhabditis elegans Hypothetical pr... 29 2.4
AF504312-1|AAM22693.1| 1583|Caenorhabditis elegans adaptor prote... 29 2.4
Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical pr... 29 3.2
AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein... 29 3.2
Z47070-3|CAA87341.1| 528|Caenorhabditis elegans Hypothetical pr... 29 4.2
U51999-7|AAA96089.1| 89|Caenorhabditis elegans Helix loop heli... 28 5.5
AF003147-1|AAB54205.2| 569|Caenorhabditis elegans Hypothetical ... 28 5.5
AF003134-4|AAB54145.2| 395|Caenorhabditis elegans Hypothetical ... 28 5.5
AC024759-3|AAK68433.1| 355|Caenorhabditis elegans Hypothetical ... 28 5.5
AC024759-2|AAM97964.1| 376|Caenorhabditis elegans Hypothetical ... 28 5.5
AC024759-1|AAK73907.1| 376|Caenorhabditis elegans Hypothetical ... 28 5.5
U61947-10|AAB03132.1| 932|Caenorhabditis elegans Kinesin-like p... 27 9.7
U41007-15|AAQ01538.1| 564|Caenorhabditis elegans Kinesin-like p... 27 9.7
U41007-14|AAA82277.1| 690|Caenorhabditis elegans Kinesin-like p... 27 9.7
AY211948-1|AAO34669.1| 932|Caenorhabditis elegans kinesin-like ... 27 9.7
AB033538-1|BAB19356.2| 930|Caenorhabditis elegans kinesin like ... 27 9.7
AB023577-1|BAB82459.1| 690|Caenorhabditis elegans Kinesin like ... 27 9.7
>Z50109-13|CAD44092.1| 1549|Caenorhabditis elegans Hypothetical
protein F45E10.1b protein.
Length = 1549
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +1
Query: 142 DGENAEIQMYLSKLQDLVPFMPKNRKISKLEVIQHVIDISATFNQ 276
DGEN E + +LQDLVP P N ++ +I + AT +Q
Sbjct: 1501 DGENPENVLKRLQLQDLVP-SPANSSRQHFNPLESLIQLHATKHQ 1544
>Z50109-12|CAD44091.1| 1583|Caenorhabditis elegans Hypothetical
protein F45E10.1a protein.
Length = 1583
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +1
Query: 142 DGENAEIQMYLSKLQDLVPFMPKNRKISKLEVIQHVIDISATFNQ 276
DGEN E + +LQDLVP P N ++ +I + AT +Q
Sbjct: 1535 DGENPENVLKRLQLQDLVP-SPANSSRQHFNPLESLIQLHATKHQ 1578
>Z50109-11|CAD91624.1| 1520|Caenorhabditis elegans Hypothetical
protein F45E10.1d protein.
Length = 1520
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +1
Query: 142 DGENAEIQMYLSKLQDLVPFMPKNRKISKLEVIQHVIDISATFNQ 276
DGEN E + +LQDLVP P N ++ +I + AT +Q
Sbjct: 1472 DGENPENVLKRLQLQDLVP-SPANSSRQHFNPLESLIQLHATKHQ 1515
>Z50109-10|CAD89729.3| 1654|Caenorhabditis elegans Hypothetical
protein F45E10.1c protein.
Length = 1654
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +1
Query: 142 DGENAEIQMYLSKLQDLVPFMPKNRKISKLEVIQHVIDISATFNQ 276
DGEN E + +LQDLVP P N ++ +I + AT +Q
Sbjct: 1606 DGENPENVLKRLQLQDLVP-SPANSSRQHFNPLESLIQLHATKHQ 1649
>Z47810-5|CAD44133.1| 1549|Caenorhabditis elegans Hypothetical protein
F45E10.1b protein.
Length = 1549
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +1
Query: 142 DGENAEIQMYLSKLQDLVPFMPKNRKISKLEVIQHVIDISATFNQ 276
DGEN E + +LQDLVP P N ++ +I + AT +Q
Sbjct: 1501 DGENPENVLKRLQLQDLVP-SPANSSRQHFNPLESLIQLHATKHQ 1544
>Z47810-4|CAD44132.1| 1583|Caenorhabditis elegans Hypothetical protein
F45E10.1a protein.
Length = 1583
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +1
Query: 142 DGENAEIQMYLSKLQDLVPFMPKNRKISKLEVIQHVIDISATFNQ 276
DGEN E + +LQDLVP P N ++ +I + AT +Q
Sbjct: 1535 DGENPENVLKRLQLQDLVP-SPANSSRQHFNPLESLIQLHATKHQ 1578
>Z47810-3|CAD91632.1| 1520|Caenorhabditis elegans Hypothetical protein
F45E10.1d protein.
Length = 1520
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +1
Query: 142 DGENAEIQMYLSKLQDLVPFMPKNRKISKLEVIQHVIDISATFNQ 276
DGEN E + +LQDLVP P N ++ +I + AT +Q
Sbjct: 1472 DGENPENVLKRLQLQDLVP-SPANSSRQHFNPLESLIQLHATKHQ 1515
>Z47810-2|CAD89730.3| 1654|Caenorhabditis elegans Hypothetical protein
F45E10.1c protein.
Length = 1654
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +1
Query: 142 DGENAEIQMYLSKLQDLVPFMPKNRKISKLEVIQHVIDISATFNQ 276
DGEN E + +LQDLVP P N ++ +I + AT +Q
Sbjct: 1606 DGENPENVLKRLQLQDLVP-SPANSSRQHFNPLESLIQLHATKHQ 1649
>Z47810-1|CAD91631.1| 1234|Caenorhabditis elegans Hypothetical protein
F45E10.1e protein.
Length = 1234
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +1
Query: 142 DGENAEIQMYLSKLQDLVPFMPKNRKISKLEVIQHVIDISATFNQ 276
DGEN E + +LQDLVP P N ++ +I + AT +Q
Sbjct: 1186 DGENPENVLKRLQLQDLVP-SPANSSRQHFNPLESLIQLHATKHQ 1229
>AF504312-1|AAM22693.1| 1583|Caenorhabditis elegans adaptor protein
UNC-53 protein.
Length = 1583
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +1
Query: 142 DGENAEIQMYLSKLQDLVPFMPKNRKISKLEVIQHVIDISATFNQ 276
DGEN E + +LQDLVP P N ++ +I + AT +Q
Sbjct: 1535 DGENPENVLKRLQLQDLVP-SPANSSRQHFNPLESLIQLHATKHQ 1578
>Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical protein
C10C6.1 protein.
Length = 1565
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +2
Query: 344 SVAAAPPSEETARPSPYAQHHPPQITLHTRTQKSNGTRKTK 466
SV++A S + P P HH +T H + S+ T +K
Sbjct: 1128 SVSSASSSNDVGSPHPLPLHHEHPLTSHDSSAASSSTAPSK 1168
>AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein
protein.
Length = 1565
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +2
Query: 344 SVAAAPPSEETARPSPYAQHHPPQITLHTRTQKSNGTRKTK 466
SV++A S + P P HH +T H + S+ T +K
Sbjct: 1128 SVSSASSSNDVGSPHPLPLHHEHPLTSHDSSAASSSTAPSK 1168
>Z47070-3|CAA87341.1| 528|Caenorhabditis elegans Hypothetical
protein T09B9.4 protein.
Length = 528
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = +1
Query: 211 NRKISKLEVIQHVIDISATFNQ---RWRITQLLDNLTLKAP*RRHLAQRR 351
N+++SK+E + I I A WR+ L + ++ P R LA+RR
Sbjct: 418 NQRMSKMEAVLEAIRIEAVRTDGPLAWRLAALSHDNSIDEPPHRMLAERR 467
>U51999-7|AAA96089.1| 89|Caenorhabditis elegans Helix loop helix
protein 15 protein.
Length = 89
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +1
Query: 166 MYLSKLQDLVPFMPKNRKISKLEVIQHVI 252
M S+L+ L+P +P +K+SK+E+++ I
Sbjct: 50 MAFSQLRALLPTLPVEKKLSKIEILRFSI 78
>AF003147-1|AAB54205.2| 569|Caenorhabditis elegans Hypothetical
protein C11D9.1 protein.
Length = 569
Score = 28.3 bits (60), Expect = 5.5
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +2
Query: 362 PSEETARPSPYAQHHPPQ-ITLHTRTQKSNGTRKTKP 469
PS++ +P Q+HPP +T H T + T TKP
Sbjct: 43 PSQQI-QPQQQQQYHPPDHVTTHNGTTTFHTTNPTKP 78
>AF003134-4|AAB54145.2| 395|Caenorhabditis elegans Hypothetical
protein ZC581.7 protein.
Length = 395
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +3
Query: 507 SLFMVNINKYTSKRPALPWEAPDAWENRSLRTSVPV 614
S++ V++NK T+ R W AP+ W+N R + +
Sbjct: 268 SIYKVDLNKPTNTR----WLAPEVWDNGETRDNTDI 299
>AC024759-3|AAK68433.1| 355|Caenorhabditis elegans Hypothetical
protein Y37E11AR.3a protein.
Length = 355
Score = 28.3 bits (60), Expect = 5.5
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = -2
Query: 620 DLHWN*SSEA---SVLPSVWSLPWQRWPLRGIFININHK 513
+L+W SSE ++W LP Q W RG+F + NH+
Sbjct: 191 ELNWGESSEFVKNGKTYTIWCLPAQHWGQRGLF-DRNHR 228
>AC024759-2|AAM97964.1| 376|Caenorhabditis elegans Hypothetical
protein Y37E11AR.3c protein.
Length = 376
Score = 28.3 bits (60), Expect = 5.5
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = -2
Query: 620 DLHWN*SSEA---SVLPSVWSLPWQRWPLRGIFININHK 513
+L+W SSE ++W LP Q W RG+F + NH+
Sbjct: 212 ELNWGESSEFVKNGKTYTIWCLPAQHWGQRGLF-DRNHR 249
>AC024759-1|AAK73907.1| 376|Caenorhabditis elegans Hypothetical
protein Y37E11AR.3b protein.
Length = 376
Score = 28.3 bits (60), Expect = 5.5
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = -2
Query: 620 DLHWN*SSEA---SVLPSVWSLPWQRWPLRGIFININHK 513
+L+W SSE ++W LP Q W RG+F + NH+
Sbjct: 212 ELNWGESSEFVKNGKTYTIWCLPAQHWGQRGLF-DRNHR 249
>U61947-10|AAB03132.1| 932|Caenorhabditis elegans Kinesin-like
protein protein 18 protein.
Length = 932
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +3
Query: 402 TILRKSPSTHEHRNQTAPEKQNQPDRPSC*MQPRLSLF 515
TIL ++PS E R+ + P+++ RPS R++LF
Sbjct: 480 TILMQTPSAKERRSSSRPKRRETQYRPS---PARMALF 514
>U41007-15|AAQ01538.1| 564|Caenorhabditis elegans Kinesin-like
protein protein 10,isoform b protein.
Length = 564
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +3
Query: 402 TILRKSPSTHEHRNQTAPEKQNQPDRPSC*MQPRLSLF 515
TIL ++PS E R+ + P+++ RPS R++LF
Sbjct: 410 TILMQTPSAKERRSSSRPKRRETQYRPS---PARMALF 444
>U41007-14|AAA82277.1| 690|Caenorhabditis elegans Kinesin-like
protein protein 10,isoform a protein.
Length = 690
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +3
Query: 402 TILRKSPSTHEHRNQTAPEKQNQPDRPSC*MQPRLSLF 515
TIL ++PS E R+ + P+++ RPS R++LF
Sbjct: 410 TILMQTPSAKERRSSSRPKRRETQYRPS---PARMALF 444
>AY211948-1|AAO34669.1| 932|Caenorhabditis elegans kinesin-like
protein-18 protein.
Length = 932
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +3
Query: 402 TILRKSPSTHEHRNQTAPEKQNQPDRPSC*MQPRLSLF 515
TIL ++PS E R+ + P+++ RPS R++LF
Sbjct: 480 TILMQTPSAKERRSSSRPKRRETQYRPS---PARMALF 514
>AB033538-1|BAB19356.2| 930|Caenorhabditis elegans kinesin like
protein KLP-18 protein.
Length = 930
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +3
Query: 402 TILRKSPSTHEHRNQTAPEKQNQPDRPSC*MQPRLSLF 515
TIL ++PS E R+ + P+++ RPS R++LF
Sbjct: 478 TILMQTPSAKERRSSSRPKRRETQYRPS---PARMALF 512
>AB023577-1|BAB82459.1| 690|Caenorhabditis elegans Kinesin like
protein protein.
Length = 690
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +3
Query: 402 TILRKSPSTHEHRNQTAPEKQNQPDRPSC*MQPRLSLF 515
TIL ++PS E R+ + P+++ RPS R++LF
Sbjct: 410 TILMQTPSAKERRSSSRPKRRETQYRPS---PARMALF 444
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,116,175
Number of Sequences: 27780
Number of extensions: 298302
Number of successful extensions: 947
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 890
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 945
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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