Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20792
(553 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47462| Best HMM Match : Ras (HMM E-Value=0) 124 5e-29
SB_6223| Best HMM Match : Ras (HMM E-Value=0) 81 6e-16
SB_1071| Best HMM Match : Ras (HMM E-Value=0) 79 3e-15
SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35) 66 1e-11
SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21) 59 3e-09
SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19) 58 4e-09
SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07) 58 4e-09
SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 4e-08
SB_5178| Best HMM Match : Ras (HMM E-Value=9e-10) 54 6e-08
SB_37884| Best HMM Match : Ubie_methyltran (HMM E-Value=0.00014) 52 3e-07
SB_11757| Best HMM Match : Ras (HMM E-Value=0) 50 1e-06
SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06) 49 2e-06
SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 7e-06
SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13) 47 9e-06
SB_49432| Best HMM Match : Ras (HMM E-Value=1.4e-12) 46 2e-05
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 46 2e-05
SB_27557| Best HMM Match : Ras (HMM E-Value=0) 45 4e-05
SB_51370| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_11841| Best HMM Match : Ras (HMM E-Value=0) 41 8e-04
SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31) 40 0.001
SB_33026| Best HMM Match : Ras (HMM E-Value=3.7e-08) 39 0.002
SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.004
SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.017
SB_12958| Best HMM Match : Ras (HMM E-Value=6e-13) 36 0.022
SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.029
SB_7589| Best HMM Match : Ras (HMM E-Value=0) 35 0.038
SB_44625| Best HMM Match : Ras (HMM E-Value=0) 35 0.051
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 33 0.16
SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7) 33 0.21
SB_49252| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.21
SB_54971| Best HMM Match : Ras (HMM E-Value=0) 32 0.36
SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21) 32 0.36
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.47
SB_57110| Best HMM Match : 7tm_1 (HMM E-Value=4.9e-22) 31 0.63
SB_4238| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.63
SB_36483| Best HMM Match : Ras (HMM E-Value=0) 30 1.1
SB_2260| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_8315| Best HMM Match : Ras (HMM E-Value=0) 29 3.3
SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34) 29 3.3
SB_10811| Best HMM Match : Ras (HMM E-Value=0) 28 4.4
SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42) 28 5.8
SB_24286| Best HMM Match : DUF1368 (HMM E-Value=4.1) 28 5.8
SB_19811| Best HMM Match : RVT_1 (HMM E-Value=3.5e-32) 28 5.8
SB_24110| Best HMM Match : Metallothionein (HMM E-Value=1.9) 28 5.8
SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.7
>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
Length = 385
Score = 124 bits (299), Expect = 5e-29
Identities = 57/65 (87%), Positives = 63/65 (96%)
Frame = +1
Query: 274 KSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNG 453
KSALTVQFV+G F+EKYDPTIEDFYRKEIEVDN+P +LEILDTAGTEQFASMRDLYIKNG
Sbjct: 16 KSALTVQFVTGQFVEKYDPTIEDFYRKEIEVDNNPSILEILDTAGTEQFASMRDLYIKNG 75
Query: 454 QGFVV 468
QGF++
Sbjct: 76 QGFLL 80
Score = 37.1 bits (82), Expect = 0.010
Identities = 18/27 (66%), Positives = 19/27 (70%)
Frame = +2
Query: 470 VYSLTNHQTFLRHKPMKELITRVKGSE 550
VYSL N QTF KPM+ I RVKGSE
Sbjct: 81 VYSLINRQTFADLKPMRAQILRVKGSE 107
>SB_6223| Best HMM Match : Ras (HMM E-Value=0)
Length = 1665
Score = 81.0 bits (191), Expect = 6e-16
Identities = 34/65 (52%), Positives = 50/65 (76%)
Frame = +1
Query: 274 KSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNG 453
KSALT+QF+ F+ YDPTIED YRK+ +D L+ILDTAG E+F++MR+ Y+++G
Sbjct: 24 KSALTIQFIQSHFVSDYDPTIEDSYRKQCVIDERVAHLDILDTAGQEEFSAMREQYMRSG 83
Query: 454 QGFVV 468
+GF++
Sbjct: 84 EGFLL 88
>SB_1071| Best HMM Match : Ras (HMM E-Value=0)
Length = 228
Score = 78.6 bits (185), Expect = 3e-15
Identities = 43/65 (66%), Positives = 47/65 (72%)
Frame = +1
Query: 274 KSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNG 453
KSALTVQFV+G F+EKYDPTIEDFY TAGTEQFASMRDLYIKNG
Sbjct: 16 KSALTVQFVTGQFVEKYDPTIEDFYH----------------TAGTEQFASMRDLYIKNG 59
Query: 454 QGFVV 468
QGF++
Sbjct: 60 QGFLL 64
Score = 37.1 bits (82), Expect = 0.010
Identities = 18/27 (66%), Positives = 19/27 (70%)
Frame = +2
Query: 470 VYSLTNHQTFLRHKPMKELITRVKGSE 550
VYSL N QTF KPM+ I RVKGSE
Sbjct: 65 VYSLINRQTFADLKPMRAQILRVKGSE 91
>SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35)
Length = 263
Score = 66.5 bits (155), Expect = 1e-11
Identities = 32/66 (48%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Frame = +1
Query: 274 KSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQ-FASMRDLYIKN 450
K+AL V+F+ F+ +YDPTIED YRK I +D+ LEILDTA Q +RD +++
Sbjct: 18 KTALLVRFLCHRFLGEYDPTIEDKYRKSINIDDVTVTLEILDTASRGQNSCKLRDQFVRE 77
Query: 451 GQGFVV 468
G GF+V
Sbjct: 78 GDGFIV 83
>SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21)
Length = 242
Score = 58.8 bits (136), Expect = 3e-09
Identities = 28/76 (36%), Positives = 46/76 (60%)
Frame = +1
Query: 274 KSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNG 453
K++L ++F+ F + Y PTIEDF+ K + +N L+I+DT+GT +F +MR + I G
Sbjct: 41 KTSLILRFLGYAFNDDYSPTIEDFFIKHVFFNNETYELQIIDTSGTYEFPAMRKVDIAKG 100
Query: 454 QGFVVSIFINKPPNVF 501
FV+ ++ P F
Sbjct: 101 DAFVL-VYSQDHPESF 115
>SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19)
Length = 351
Score = 58.4 bits (135), Expect = 4e-09
Identities = 27/66 (40%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Frame = +1
Query: 274 KSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNS-PCVLEILDTAGTEQFASMRDLYIKN 450
K++L +F+SG F E+Y PT+ D Y K + + LEI+DTAG+ F +M+ L I+N
Sbjct: 120 KTSLVKRFISGTFSEQYTPTVGDLYEKSVTLSKDFNAFLEIMDTAGSYPFPAMKKLTIQN 179
Query: 451 GQGFVV 468
FV+
Sbjct: 180 ADAFVL 185
>SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07)
Length = 92
Score = 58.4 bits (135), Expect = 4e-09
Identities = 25/65 (38%), Positives = 41/65 (63%)
Frame = +1
Query: 274 KSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNG 453
KS+LT+QFV G F++ YDPTIE+ + K I+ LE++DTAG ++++ Y
Sbjct: 19 KSSLTIQFVEGQFVDSYDPTIENTFTKNIKYKGQEFFLELVDTAGQDEYSIFPQSYSMGI 78
Query: 454 QGFVV 468
G+++
Sbjct: 79 HGYIL 83
>SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 54.8 bits (126), Expect = 4e-08
Identities = 28/71 (39%), Positives = 40/71 (56%)
Frame = +1
Query: 274 KSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNG 453
KSAL V+F +G F+ +YDPT+E Y +D P L I DTA T + +Y+
Sbjct: 140 KSALLVRFCTGRFIHEYDPTLEMTYDVSATIDEDPATLHITDTASTYE-----PVYLSQN 194
Query: 454 QGFVVSIFINK 486
+GF+V IN+
Sbjct: 195 EGFIVVYSINE 205
>SB_5178| Best HMM Match : Ras (HMM E-Value=9e-10)
Length = 166
Score = 54.4 bits (125), Expect = 6e-08
Identities = 24/62 (38%), Positives = 39/62 (62%)
Frame = +1
Query: 274 KSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNG 453
K+++ +F G F E+Y+PT+ED Y K + + S VL D++G+ QF +MR++ IK
Sbjct: 21 KTSIVKRFYCGKFSEEYEPTVEDCYSKVLNKNGSIMVLNTTDSSGSYQFPAMREVAIKRA 80
Query: 454 QG 459
G
Sbjct: 81 SG 82
>SB_37884| Best HMM Match : Ubie_methyltran (HMM E-Value=0.00014)
Length = 399
Score = 52.0 bits (119), Expect = 3e-07
Identities = 23/31 (74%), Positives = 25/31 (80%)
Frame = -3
Query: 344 KSSIVGSYFSIKHPDTNCTVNALFPTPPEPT 252
KSSIVGSYFS P TNC VNA FPTPP+P+
Sbjct: 1 KSSIVGSYFSTNCPVTNCKVNADFPTPPDPS 31
>SB_11757| Best HMM Match : Ras (HMM E-Value=0)
Length = 211
Score = 50.4 bits (115), Expect = 1e-06
Identities = 24/72 (33%), Positives = 37/72 (51%)
Frame = +1
Query: 274 KSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNG 453
K++L V ++ F Y PT D Y +EV+ C++E DTAG E F ++R L +
Sbjct: 31 KTSLLVSYMMDGFPNSYVPTAFDTYHVTVEVNKKLCMIEFCDTAGQEDFDALRPLCYSSA 90
Query: 454 QGFVVSIFINKP 489
F+V + P
Sbjct: 91 DVFIVCFSVVSP 102
>SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 49.6 bits (113), Expect = 2e-06
Identities = 27/67 (40%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +1
Query: 274 KSALTVQFVSGCFMEKYDPTIE-DFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKN 450
K+ L QF G F PTI DF K ++VD L+I DTAG E+F S+ Y N
Sbjct: 20 KTCLVRQFTKGYFPPNQGPTIGVDFTIKTVDVDGEKVKLQIWDTAGQERFRSITQSYYHN 79
Query: 451 GQGFVVS 471
G +V+
Sbjct: 80 ADGVIVT 86
>SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06)
Length = 965
Score = 49.2 bits (112), Expect = 2e-06
Identities = 26/65 (40%), Positives = 41/65 (63%)
Frame = +1
Query: 274 KSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNG 453
KSALTV+F++ F+ +YD T+E YR++ EV +E+ DTAG A + + ++ G
Sbjct: 874 KSALTVRFLTKRFIGEYDDTLESTYRQDAEVAGEVVAIELTDTAGENSPAKL-ERCLEIG 932
Query: 454 QGFVV 468
+ FVV
Sbjct: 933 EVFVV 937
>SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 47.6 bits (108), Expect = 7e-06
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Frame = +1
Query: 274 KSALTVQFVSGCFMEKYDPTIE-DFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKN 450
KS+L +F+ F EKY PTI DF K + +D+ L+I DTAG E+F + YI++
Sbjct: 176 KSSLAGRFIYDIFEEKYQPTIGIDFMTKTVLLDDFEVRLQIWDTAGQERFRCLIHSYIRD 235
Query: 451 GQGFVV 468
+ ++
Sbjct: 236 SEAALI 241
>SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13)
Length = 270
Score = 47.2 bits (107), Expect = 9e-06
Identities = 26/70 (37%), Positives = 37/70 (52%)
Frame = +1
Query: 274 KSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNG 453
K++L F F EK+ PT++D++ + +D I+DTAGT F MR L I
Sbjct: 25 KTSLLKTFFGHKFSEKHVPTVDDYFIHSVNMDGVYYSTCIVDTAGTYAFPVMRRLAIHTC 84
Query: 454 QGFVVSIFIN 483
Q F+V IN
Sbjct: 85 QAFIVVFAIN 94
>SB_49432| Best HMM Match : Ras (HMM E-Value=1.4e-12)
Length = 460
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/45 (46%), Positives = 32/45 (71%)
Frame = +1
Query: 274 KSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAG 408
KSALTV+F++ F+ +YD T+E +R +++DN L+I DTAG
Sbjct: 29 KSALTVRFLTRRFIGEYDQTLESTHRHILQIDNEDVSLDISDTAG 73
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 46.4 bits (105), Expect = 2e-05
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 3/96 (3%)
Frame = +1
Query: 274 KSALTVQFVSGCFMEKYDPTIE-DFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKN 450
KS+L ++F F Y TI DF + + VD L+I DTAG E+F ++ Y ++
Sbjct: 21 KSSLLLRFADDTFSNTYISTIGVDFKIRTLTVDGKTIKLQIWDTAGQERFRTLTTAYYRS 80
Query: 451 GQGFVVSIFINKPPNV--FKT*TNEGIDYSCQRIRT 552
G V+ +N+ E +Y+C+ + T
Sbjct: 81 AHGIVLIYDVNESETFLHLSQWLEEVSEYACEGVNT 116
>SB_27557| Best HMM Match : Ras (HMM E-Value=0)
Length = 184
Score = 45.2 bits (102), Expect = 4e-05
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Frame = +1
Query: 274 KSALTVQFVSGCFMEKYDPTIE-DFYRKEIEVDNSPCV-LEILDTAGTEQFASMRDLYIK 447
KS+L QF G F E DPT+ DF+ + +E+ + L+I DTAG E+F S+ Y +
Sbjct: 26 KSSLLRQFTEGQFFENSDPTVGVDFHVRVLELKGDVRIKLQIWDTAGQERFRSITYSYYR 85
Query: 448 NGQGFVV 468
N G ++
Sbjct: 86 NTVGCLI 92
>SB_51370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/61 (34%), Positives = 33/61 (54%)
Frame = +1
Query: 226 NNARIXXXXXXXXXXXKSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTA 405
NN + KSA TV+ ++ F+ +YDP +E Y+ +E+D L++LDTA
Sbjct: 178 NNRALSVAVLGKDGVGKSAFTVRALTRRFIGEYDPFLELNYKHSMEIDGQYLALDVLDTA 237
Query: 406 G 408
G
Sbjct: 238 G 238
>SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6116
Score = 41.9 bits (94), Expect = 3e-04
Identities = 23/75 (30%), Positives = 37/75 (49%)
Frame = +1
Query: 274 KSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNG 453
K+ L + F F E Y PT+ + Y +IEVD L + DTAG E + +R L +
Sbjct: 5942 KTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDT 6001
Query: 454 QGFVVSIFINKPPNV 498
++ I+ P ++
Sbjct: 6002 DVILMCFSIDSPDSL 6016
>SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 41.5 bits (93), Expect = 4e-04
Identities = 20/72 (27%), Positives = 33/72 (45%)
Frame = +1
Query: 274 KSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNG 453
K+ L + + + F +Y PT+ D Y + + P L + DTAG E + +R L
Sbjct: 16 KTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQT 75
Query: 454 QGFVVSIFINKP 489
F+V + P
Sbjct: 76 DVFLVCFSVVSP 87
>SB_11841| Best HMM Match : Ras (HMM E-Value=0)
Length = 523
Score = 40.7 bits (91), Expect = 8e-04
Identities = 15/32 (46%), Positives = 25/32 (78%)
Frame = +1
Query: 388 EILDTAGTEQFASMRDLYIKNGQGFVVSIFIN 483
+ILDTAG E++++MRD Y++ G+GF+ +N
Sbjct: 280 DILDTAGQEEYSAMRDQYMRTGEGFLCVFAVN 311
>SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31)
Length = 506
Score = 39.9 bits (89), Expect = 0.001
Identities = 22/72 (30%), Positives = 36/72 (50%)
Frame = +1
Query: 274 KSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNG 453
K+AL +V F EKY+ T+ + +EVD L + DT+G E + +R L N
Sbjct: 245 KTALLNAYVRNQFNEKYEATVFNSLSTAVEVDGERIELTLWDTSGHEDYDHVRPLSYNNV 304
Query: 454 QGFVVSIFINKP 489
++ I++P
Sbjct: 305 DIVLICFDISRP 316
>SB_33026| Best HMM Match : Ras (HMM E-Value=3.7e-08)
Length = 155
Score = 39.1 bits (87), Expect = 0.002
Identities = 16/42 (38%), Positives = 27/42 (64%)
Frame = +1
Query: 283 LTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAG 408
LTV+F++ F+ +YDP +E YR + V ++++DTAG
Sbjct: 2 LTVRFITRRFIGEYDPCLEASYRHHLTVHGQYIAMDVVDTAG 43
>SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 410
Score = 39.1 bits (87), Expect = 0.002
Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +1
Query: 274 KSALTVQFVSGCFMEKYDPTIE-DFYRKEIEVDNSPCVLEILDTAGTEQFASMR 432
KS+L +FV G F + TI +F K++++D L+I DTAG E+F S+R
Sbjct: 224 KSSLMNRFVCGKFDTQSFHTIGVEFLNKDVKLDGESYTLQIWDTAGQERFKSLR 277
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 38.7 bits (86), Expect = 0.003
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +1
Query: 274 KSALTVQFVSGCFMEKYDPTIE-DFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKN 450
KS+L ++F F TI DF K + V+ + L I DTAG E+F ++ Y +
Sbjct: 21 KSSLLLRFTDDTFDPDIGATIGVDFKVKTLTVEGNKAKLAIWDTAGQERFRTLTPSYYRG 80
Query: 451 GQGFVV 468
QG ++
Sbjct: 81 AQGVIL 86
>SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 38.3 bits (85), Expect = 0.004
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +1
Query: 310 FMEKYDPTIE-DFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNGQGFVV 468
+ E Y TI DF + IE+D L+I DTAG E+F ++ Y + G +V
Sbjct: 54 YTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIV 107
>SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 36.3 bits (80), Expect = 0.017
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Frame = +1
Query: 274 KSALTVQFVSGCFMEKYDPTIE-DFYRKEIEVDNSPCVLEILDTAGTEQF-ASMRDLYIK 447
K+ L + +G F E+ + TI DF+ K +E++ L++ DTAG E+F SM Y +
Sbjct: 59 KTCLAYRLCTGKFPERTETTIGVDFWEKSLELNGEFVKLQLWDTAGQERFRKSMVCHYYR 118
Query: 448 N 450
N
Sbjct: 119 N 119
>SB_12958| Best HMM Match : Ras (HMM E-Value=6e-13)
Length = 168
Score = 35.9 bits (79), Expect = 0.022
Identities = 19/41 (46%), Positives = 25/41 (60%)
Frame = +1
Query: 346 YRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNGQGFVV 468
Y KE+ + +S L+ILDTAG + + YI NG GFVV
Sbjct: 4 YEKELRIGDSSMELDILDTAGNGEAS-----YIHNGDGFVV 39
>SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 467
Score = 35.5 bits (78), Expect = 0.029
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +1
Query: 274 KSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMRDL 438
KSA + + F +Y PT+ D Y I +D + + DTAG E + +R L
Sbjct: 18 KSAFLITATTNAFPGEYIPTVFDNYSSNIMLDGKAYNVGLWDTAGQEDYDRLRPL 72
>SB_7589| Best HMM Match : Ras (HMM E-Value=0)
Length = 640
Score = 35.1 bits (77), Expect = 0.038
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +1
Query: 274 KSALTVQFVSGCFMEKYDPTIE-DFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKN 450
KS+ ++ F + T+ DF K + VD L++ DTAG E+F S+ Y +
Sbjct: 455 KSSFILRLCRNRFHSALNSTLGVDFQMKTLVVDGKTYALQLWDTAGQERFRSIAKSYFRK 514
Query: 451 GQGFVV 468
G ++
Sbjct: 515 ADGVLL 520
>SB_44625| Best HMM Match : Ras (HMM E-Value=0)
Length = 128
Score = 34.7 bits (76), Expect = 0.051
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +1
Query: 310 FMEKYDPTIE-DFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNGQGFVV 468
F Y TI DF + I +D L+I DTAG E+F ++ Y + G +V
Sbjct: 2 FSGSYITTIGVDFKIRTINIDGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIV 55
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 33.1 bits (72), Expect = 0.16
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +1
Query: 274 KSALTVQFVSGCFMEKYDPTIE-DFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKN 450
KS+ +F + + TI DF K + V+ +++ DTAG E+F S+ Y +
Sbjct: 909 KSSFLHRFCHDQWKPSFTATIGVDFQIKTMNVNGQCIAIQLWDTAGQERFRSITKQYFRK 968
Query: 451 GQGFVV 468
G ++
Sbjct: 969 ADGILI 974
>SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7)
Length = 368
Score = 32.7 bits (71), Expect = 0.21
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +1
Query: 274 KSALTVQFVSGCFMEKYDPTIEDFYR 351
K+AL V+FV+G F+ +YDPT+ + R
Sbjct: 337 KTALVVRFVTGRFLNEYDPTLGEHAR 362
>SB_49252| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 384
Score = 32.7 bits (71), Expect = 0.21
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +1
Query: 370 NSPCVLEILDTAGTEQFASMRDLYIKNGQGFVVSIFINKP 489
++ C L +LDT+G E++ + +Y+KN V + +N P
Sbjct: 60 SNSCHLYLLDTSGLEEYRELTKIYLKNLDCVVFTFALNDP 99
>SB_54971| Best HMM Match : Ras (HMM E-Value=0)
Length = 239
Score = 31.9 bits (69), Expect = 0.36
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +1
Query: 274 KSALTVQFVSGCFMEKYDPTIE-DFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKN 450
K+ + ++G F +KY T+ + + P + DTAG E+F +RD Y
Sbjct: 45 KTTFVKRHLTGEFEKKYIATLGVEVHPLIFFTSRGPIKFNVWDTAGQEKFGGLRDGYYIQ 104
Query: 451 GQGFVV 468
GQ ++
Sbjct: 105 GQCAII 110
>SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21)
Length = 115
Score = 31.9 bits (69), Expect = 0.36
Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +1
Query: 274 KSALTVQFVSGCFMEKYDPTIE-DFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKN 450
K++ ++ F + T+ DF K + ++ L+I DTAG E++ ++ Y +
Sbjct: 34 KTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRNDKRVKLQIWDTAGQERYRTITTAYYRG 93
Query: 451 GQGFVV 468
GF++
Sbjct: 94 AMGFIL 99
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 31.5 bits (68), Expect = 0.47
Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +1
Query: 274 KSALTVQFVSGCFMEKYDPTIE-DFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKN 450
K++L +F G F + T+ D + +++ L+ DTAG E+F + Y +N
Sbjct: 24 KTSLIRRFTKGYFCDNSSSTVGVDVGTRVLDIHGDRVKLQCWDTAGQEKFRGITQSYYRN 83
Query: 451 GQGFVV 468
++
Sbjct: 84 ADAVIL 89
>SB_57110| Best HMM Match : 7tm_1 (HMM E-Value=4.9e-22)
Length = 559
Score = 31.1 bits (67), Expect = 0.63
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = +1
Query: 427 MRDLYIKNGQGFVV 468
MRDLY+KNGQGFV+
Sbjct: 1 MRDLYMKNGQGFVL 14
>SB_4238| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1288
Score = 31.1 bits (67), Expect = 0.63
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = -2
Query: 195 HTML*KRIHTVRYKMSLLCWFMTHSDAITELHLLKLIDKHRRHFSSM*IKITPTA 31
+T + + + +R K S + + THSD ITE+ + K + S + IK+ P A
Sbjct: 178 NTKILEELVVLRKKRSDILGYATHSDYITEMRMSKSAANVSKFLSDLAIKLHPLA 232
>SB_36483| Best HMM Match : Ras (HMM E-Value=0)
Length = 213
Score = 30.3 bits (65), Expect = 1.1
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +1
Query: 274 KSALTVQFVSGCFMEKYDPTIE-DFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKN 450
KS+L +F F + TI DF+ + ++D L++ DTAG E++ ++ + +
Sbjct: 23 KSSLIRRFHDDEFNAQLCTTIGVDFFIHDFDLDGKKVKLQLWDTAGEEKYRALSRSFFRG 82
Query: 451 GQG 459
G
Sbjct: 83 ADG 85
>SB_2260| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 502
Score = 29.9 bits (64), Expect = 1.4
Identities = 28/112 (25%), Positives = 45/112 (40%), Gaps = 2/112 (1%)
Frame = -2
Query: 486 FVNEYTYYKALTIFYIQISHRSKLLRASGVQNF*NTRRIVHFDFFSVEILYRRIIFFHKT 307
F YTYY T+ + +H + L + ++H+ + L+R + H T
Sbjct: 62 FCVHYTYYTTRTLHVLLYTHTKRALHVLHYTHTKRALNVLHYT-HAKRTLHRALHVLHYT 120
Query: 306 S*YKLHSQRTLSDPTRTHT-TTLNSRIIVLRKSQLRVFH-TML*KRIHTVRY 157
H++R L THT TL+ K L V H T + +H + Y
Sbjct: 121 -----HTKRALHVLHYTHTKRTLHVLHYTHTKPALHVLHYTHNTRALHVLHY 167
>SB_8315| Best HMM Match : Ras (HMM E-Value=0)
Length = 565
Score = 28.7 bits (61), Expect = 3.3
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 12/77 (15%)
Frame = +1
Query: 274 KSALTVQFVSGCFMEKYDPTIE-DFYRKEI-----------EVDNSPCVLEILDTAGTEQ 417
K++L Q+ F ++ PTI DF K + L++ DTAG E+
Sbjct: 119 KTSLLYQYTDSHFNPRFVPTIGIDFREKRVVHHPLNPDGERSTRGQRIHLQLWDTAGQER 178
Query: 418 FASMRDLYIKNGQGFVV 468
F S+ + ++ GF++
Sbjct: 179 FRSLTTAFFRDAMGFLL 195
>SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34)
Length = 241
Score = 28.7 bits (61), Expect = 3.3
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1
Query: 385 LEILDTAGTEQFASMRDLYIKNGQGFVVSIFINK 486
L+I DTAG E+F ++ Y ++ G +++ I K
Sbjct: 97 LQIWDTAGQERFRTITQSYYRSCNGVIIAYDITK 130
>SB_10811| Best HMM Match : Ras (HMM E-Value=0)
Length = 304
Score = 28.3 bits (60), Expect = 4.4
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +1
Query: 340 DFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNGQG 459
+F K + V L+I DTAG E+F S+ Y + G
Sbjct: 131 EFGSKIVNVGGKSVKLQIWDTAGQERFRSVTRSYYRGAAG 170
>SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42)
Length = 704
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +1
Query: 331 TIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNGQG 459
++ D + + DN L I DTAG E++ S+ Y + QG
Sbjct: 385 SMNDIFWEYFLYDNKKIKLTIGDTAGQERYFSILPAYFRGVQG 427
>SB_24286| Best HMM Match : DUF1368 (HMM E-Value=4.1)
Length = 436
Score = 27.9 bits (59), Expect = 5.8
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +1
Query: 361 EVDNSPCVLEILDTAGTEQFASMRD 435
++ S C+LE+LD TE+ + MRD
Sbjct: 275 QILKSICILELLDVESTEKSSRMRD 299
>SB_19811| Best HMM Match : RVT_1 (HMM E-Value=3.5e-32)
Length = 670
Score = 27.9 bits (59), Expect = 5.8
Identities = 10/34 (29%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +1
Query: 295 FVSGC-FMEKYDPTIEDFYRKEIEVDNSPCVLEI 393
++ C FM + T +DF+ E+ ++++PC L++
Sbjct: 242 YLDDCYFMGEVSTTNDDFWSAEVFINHNPCTLKL 275
>SB_24110| Best HMM Match : Metallothionein (HMM E-Value=1.9)
Length = 237
Score = 27.9 bits (59), Expect = 5.8
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 402 RWHGAVCFDARSVYKKWSRLCSKY 473
+W VC +VY KWS +C+K+
Sbjct: 209 KW-STVCAKCSTVYAKWSTVCAKW 231
>SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1306
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 274 KSALTVQFVSGCFMEKYDPTIEDFYRKEI 360
KS+L F F E+Y PTIE+F K +
Sbjct: 40 KSSLIRGFCGEGFQEEYVPTIEEFVSKHL 68
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,756,347
Number of Sequences: 59808
Number of extensions: 371042
Number of successful extensions: 989
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 894
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 974
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1276425465
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -