Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20789
(571 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC839.06 |cta3||P-type ATPase, calcium transporting Cta3|Schiz... 60 3e-10
SPAPB2B4.04c ||pmc1, pmc1|P-type ATPase, calcium transporting Pm... 58 7e-10
SPBC31E1.02c |pmr1||P-type ATPase, calcium transporting Pmr1 |Sc... 58 9e-10
SPBC29A3.01 |||heavy metal ATPase |Schizosaccharomyces pombe|chr... 36 0.003
SPAC1071.10c |pma1||P-type proton ATPase Pma1 |Schizosaccharomyc... 36 0.006
SPCC1020.01c |pma2|SPCC1393.01|P-type proton ATPase Pma2 |Schizo... 33 0.029
SPAC6C3.06c |||P-type ATPase, calcium transporting|Schizosacchar... 33 0.039
SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr 1|... 32 0.051
SPBC887.12 |||P-type ATPase |Schizosaccharomyces pombe|chr 2|||M... 32 0.051
SPAC821.13c ||SPAC955.01c|P-type ATPase |Schizosaccharomyces pom... 32 0.051
SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium tra... 31 0.090
SPBC887.09c |||leucine-rich repeat protein Sog2 |Schizosaccharom... 30 0.21
SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr 1||... 27 1.5
SPAC4A8.10 |||lipase |Schizosaccharomyces pombe|chr 1|||Manual 27 1.9
SPAC29A4.19c |||P-type ATPase |Schizosaccharomyces pombe|chr 1||... 27 1.9
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 27 2.6
SPBC36.11 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||M... 26 3.4
SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subuni... 26 4.5
SPCC16C4.07 |scw1||RNA-binding protein Scw1|Schizosaccharomyces ... 25 5.9
SPBC660.14 |mik1||mitotic inhibitor kinase Mik1|Schizosaccharomy... 25 5.9
SPAC15A10.11 |ubr11||N-end-recognizing protein |Schizosaccharomy... 25 5.9
SPBC1734.15 |rsc4|brd1|RSC complex subunit Rsc4|Schizosaccharomy... 25 7.8
SPCC1902.02 |mug72|SPCC663.16c|ketopantoate reductase |Schizosac... 25 7.8
SPBC902.02c |ctf18|chl12|DNA replication factor C complex subuni... 25 7.8
SPAC11E3.13c |||1,3-beta-glucanosyltransferase |Schizosaccharomy... 25 7.8
>SPBC839.06 |cta3||P-type ATPase, calcium transporting
Cta3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1037
Score = 59.7 bits (138), Expect = 3e-10
Identities = 35/104 (33%), Positives = 54/104 (51%), Gaps = 5/104 (4%)
Frame = +3
Query: 261 EVNLTFVGVVGMLDPPRKEVFDSIVRCRAAGIRVIVITGDNKSTAEAICRRIGVF----- 425
E +L FV +VG+ DPPR E ++ C AGIRV ++TGD+ TA+AI R +G+
Sbjct: 583 ESSLEFVSLVGIYDPPRTESKGAVELCHRAGIRVHMLTGDHPETAKAIAREVGIIPPFIS 642
Query: 426 GEDEDTTGKSFSGREFDDLPIAEQRSAWPRLACSRAWSPRTSLR 557
D + + +G +FD L E S +P+T ++
Sbjct: 643 DRDPNMSWMVMTGSQFDALSDEEVDSLKALCLVIARCAPQTKVK 686
Score = 28.7 bits (61), Expect = 0.63
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = +1
Query: 34 LFVKGAPEGVLERCTHARVGTSKVPLTTTLKNRILDLTRQYGTGRDTLRCLALAT 198
++ KGA E +LERC+ + T + P +R L + + + LR LALAT
Sbjct: 517 VYAKGAVERILERCSTSNGSTLEEP------DRELIIAQMETLAAEGLRVLALAT 565
>SPAPB2B4.04c ||pmc1, pmc1|P-type ATPase, calcium transporting Pmc1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1292
Score = 58.4 bits (135), Expect = 7e-10
Identities = 33/92 (35%), Positives = 52/92 (56%)
Frame = +3
Query: 267 NLTFVGVVGMLDPPRKEVFDSIVRCRAAGIRVIVITGDNKSTAEAICRRIGVFGEDEDTT 446
++TF+G G++DP R +V ++ C+ AG+ V ++TGDN TA+AI + G++ ED
Sbjct: 772 DMTFLGFFGIMDPIRPDVPLAVKVCQGAGVTVRMVTGDNIVTAKAIASQCGIYTED---- 827
Query: 447 GKSFSGREFDDLPIAEQRSAWPRLACSRAWSP 542
G S G EF L ++ P+L SP
Sbjct: 828 GISMEGPEFRSLSDEKRLEILPKLDVLARSSP 859
>SPBC31E1.02c |pmr1||P-type ATPase, calcium transporting Pmr1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 899
Score = 58.0 bits (134), Expect = 9e-10
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 3/99 (3%)
Frame = +3
Query: 270 LTFVGVVGMLDPPRKEVFDSIVRCRAAGIRVIVITGDNKSTAEAICRRIGV---FGEDED 440
L F G+ G+ DPPR +V +S+ G+RVI+ITGD+ TA +I R +G+ ++E
Sbjct: 512 LVFHGLFGINDPPRPQVRESVQYLMTGGVRVIMITGDSVVTAISIARSLGMAIPSNDEEA 571
Query: 441 TTGKSFSGREFDDLPIAEQRSAWPRLACSRAWSPRTSLR 557
+ +G + DDL + R A R+ +P+ ++
Sbjct: 572 IRNYALTGAQLDDLDSSSLRDAVSRVVVFARTTPQHKMK 610
>SPBC29A3.01 |||heavy metal ATPase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 904
Score = 36.3 bits (80), Expect = 0.003
Identities = 14/49 (28%), Positives = 29/49 (59%)
Frame = +3
Query: 276 FVGVVGMLDPPRKEVFDSIVRCRAAGIRVIVITGDNKSTAEAICRRIGV 422
FVG +G +D R + + ++ + G +V ++TGD K+TA + + + +
Sbjct: 661 FVGFLGCMDQVRPDSYQTVSALKQLGKKVCLLTGDQKATARRVAQGLEI 709
>SPAC1071.10c |pma1||P-type proton ATPase Pma1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 919
Score = 35.5 bits (78), Expect = 0.006
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = +3
Query: 279 VGVVGMLDPPRKEVFDSIVRCRAAGIRVIVITGDNKSTAEAICRRIGV 422
+G++ DPPR + +I + G+RV ++TGD A+ R++G+
Sbjct: 525 MGIMPCSDPPRHDTARTISEAKRLGLRVKMLTGDAVDIAKETARQLGM 572
>SPCC1020.01c |pma2|SPCC1393.01|P-type proton ATPase Pma2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1010
Score = 33.1 bits (72), Expect = 0.029
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +3
Query: 279 VGVVGMLDPPRKEVFDSIVRCRAAGIRVIVITGDNKSTAEAICRRIGV 422
+G++ DPPR + +I G+R+ ++TGD A+ R++G+
Sbjct: 613 LGIMPCSDPPRHDTARTIHEAIGLGLRIKMLTGDAVGIAKETARQLGM 660
Score = 27.9 bits (59), Expect = 1.1
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
Frame = -3
Query: 503 AALLGDGQVIELATGERFASGIFVLSEYTDTPADGFGSGLVVTGD-----DDYANTGSAT 339
A++L DG+V E+ E I L E T PAD G ++T D D A TG +
Sbjct: 266 ASVLRDGRVKEIEASEIVPGDILHLDEGTICPAD----GRLITKDCFLQVDQSAITGESL 321
Query: 338 TNDRVEN 318
D+ +N
Sbjct: 322 AVDKHQN 328
>SPAC6C3.06c |||P-type ATPase, calcium
transporting|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1033
Score = 32.7 bits (71), Expect = 0.039
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = +3
Query: 261 EVNLTFVGVVGMLDPPRKEVFDSIVRCRAAGIRVIVITGDNKSTAEAI 404
E ++ +G+ G+ D +K+V ++ R AGI V ++TGD TA I
Sbjct: 625 ENDMDLLGLTGVEDKLQKDVKITLELLRNAGIHVWMLTGDKVETARCI 672
>SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1402
Score = 32.3 bits (70), Expect = 0.051
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = +3
Query: 261 EVNLTFVGVVGMLDPPRKEVFDSIVRCRAAGIRVIVITGDNKSTA 395
E +LT +G + D ++ V DSI AGI++ V+TGD TA
Sbjct: 842 ESHLTLLGGTAIEDRLQEGVPDSIALLAQAGIKLWVLTGDKMETA 886
>SPBC887.12 |||P-type ATPase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1258
Score = 32.3 bits (70), Expect = 0.051
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = +3
Query: 261 EVNLTFVGVVGMLDPPRKEVFDSIVRCRAAGIRVIVITGDNKSTAEAICRRIGVFGED 434
E +L +G + D + V D+I + AGI++ V+TGD + TA I + ED
Sbjct: 753 EKDLILLGATAIEDRLQDGVPDTISTLQTAGIKIWVLTGDRQETAINIGMSCKLIDED 810
>SPAC821.13c ||SPAC955.01c|P-type ATPase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1562
Score = 32.3 bits (70), Expect = 0.051
Identities = 21/57 (36%), Positives = 28/57 (49%)
Frame = +3
Query: 261 EVNLTFVGVVGMLDPPRKEVFDSIVRCRAAGIRVIVITGDNKSTAEAICRRIGVFGE 431
E +L F G + D + V +SI AGI+ ++TGD K TA I GV E
Sbjct: 1065 EKDLEFAGATAIEDKLQVGVPESINSLFRAGIKFWMLTGDKKETAINIGHSCGVIKE 1121
>SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium
transporting Cta4 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1211
Score = 31.5 bits (68), Expect = 0.090
Identities = 14/54 (25%), Positives = 28/54 (51%)
Frame = +3
Query: 261 EVNLTFVGVVGMLDPPRKEVFDSIVRCRAAGIRVIVITGDNKSTAEAICRRIGV 422
E +L F G + P +++ ++ + R ++ITGDN TA + ++G+
Sbjct: 671 ESDLVFAGFLIFTSPLKEDARQTVQMLNNSSHRCMMITGDNPLTAVYVAEQVGI 724
>SPBC887.09c |||leucine-rich repeat protein Sog2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 886
Score = 30.3 bits (65), Expect = 0.21
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = -1
Query: 484 GRSSNSRPEKDLPVVSSSSPNTPIRLQMASAVDLLSPVMTI--TRIPAARQRTIESKTS 314
G S+ +R KDL ++ SSS +A+ V L+SP+ + T + AA +S TS
Sbjct: 794 GLSAATRSTKDLTILLSSSARHYTESSLATPVPLMSPIARVPATPLSAALGSAAQSITS 852
>SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1367
Score = 27.5 bits (58), Expect = 1.5
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +3
Query: 261 EVNLTFVGVVGMLDPPRKEVFDSIVRCRAAGIRVIVITGDNKSTA 395
E L +G + D ++ V ++I AGI++ V+TGD TA
Sbjct: 865 EQELELLGGTAIEDKLQENVPETIALLAIAGIKLWVLTGDKVETA 909
>SPAC4A8.10 |||lipase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 723
Score = 27.1 bits (57), Expect = 1.9
Identities = 27/84 (32%), Positives = 35/84 (41%), Gaps = 2/84 (2%)
Frame = -3
Query: 365 DYANTGSATTNDRVENF--FTRGVQHADDSDERKVDFVS*NLVESPRSISSGLRGLSAVA 192
DY G+ T N N TRGV H S F S NL R + + L G + A
Sbjct: 43 DYHKVGAFTDNTNAINIPEQTRGVSHTSSSPSVGTSFSSINL----REVKNPLAGSDSTA 98
Query: 191 RAKQRSVSRPVPYWRVRSKMRFFR 120
+ S V + RVR++ FR
Sbjct: 99 PFINSTNS--VLWIRVRNREARFR 120
>SPAC29A4.19c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1096
Score = 27.1 bits (57), Expect = 1.9
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +3
Query: 255 TYEVNLTFVGVVGMLDPPRKEVFDSIVRCRAAGIRVIVITGDNKSTAEAICRRIG 419
T E N+TF G+ + P R+ D I + + V + +GD+ T+ + + G
Sbjct: 673 TLESNVTFQGLFVLESPLRESSKDVISSLLRSKMEVSICSGDSLFTSVFVAKHCG 727
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 26.6 bits (56), Expect = 2.6
Identities = 25/99 (25%), Positives = 41/99 (41%), Gaps = 6/99 (6%)
Frame = -1
Query: 544 RGLHAREQASLGQALRCSAMGRSSNS---RPEKDLPVVSSSSPNTPIRLQMASAVDLLSP 374
RG R+ G+A + + + S +P K+ + S + Q AS V+LL+P
Sbjct: 1575 RGSQNRDSKKTGKARKDKGINNNQTSPQNKPSKESLKSDTISNEKKVFPQKASKVNLLTP 1634
Query: 373 VMTITRIPAARQRTIESKTSLRGGSN---MPTTPTNVRL 266
++ A++ + T RG N P P N L
Sbjct: 1635 TIS-NGTRASKHANEKENTFPRGVENNLVAPMIPNNTEL 1672
>SPBC36.11 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 343
Score = 26.2 bits (55), Expect = 3.4
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -1
Query: 361 TRIPAARQRTIESKTSLRGGSNMPTTP 281
+R+ A R+ T + K RGG M +TP
Sbjct: 143 SRLAAVRKNTEQEKMGYRGGYQMHSTP 169
>SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subunit a
Pol2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 2199
Score = 25.8 bits (54), Expect = 4.5
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -3
Query: 368 DDYANTGSATTNDRVENFFTRGVQHADDSDERKVDFVS*NLVE 240
D Y N S N +EN F + H D E V + S L++
Sbjct: 196 DAYTNLSSENLNGIIENAFEDPLNHVLDIREYDVPYHSRTLID 238
>SPCC16C4.07 |scw1||RNA-binding protein Scw1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 561
Score = 25.4 bits (53), Expect = 5.9
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -3
Query: 95 VPTRACVQRSSTPSGAPLTNSLGPL 21
+PT A V++S+TP G L+N G L
Sbjct: 71 LPTYASVEKSTTPIGRLLSNLNGGL 95
>SPBC660.14 |mik1||mitotic inhibitor kinase Mik1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 581
Score = 25.4 bits (53), Expect = 5.9
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -1
Query: 472 NSRPEKDLPVVSSSSPNTPIRLQMASAVD 386
N+ EKD+P S +P +PI L + SA D
Sbjct: 246 NNWDEKDVPSSLSWTPTSPIFLNINSADD 274
>SPAC15A10.11 |ubr11||N-end-recognizing protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2052
Score = 25.4 bits (53), Expect = 5.9
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +2
Query: 146 PASTVLVAIRCVAWPWPRPITPSNPTKWILVTPPNSNLR 262
PA+ V++R W P PI PS+ + V P+S LR
Sbjct: 559 PAAVCQVSLREDYWKSPHPIPPSS---YSFVESPSSILR 594
>SPBC1734.15 |rsc4|brd1|RSC complex subunit Rsc4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 542
Score = 25.0 bits (52), Expect = 7.8
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +3
Query: 87 RRHQQGSSDHDPEEPHLGPDPPV 155
+ H +S H+PEE P P V
Sbjct: 254 KEHSPATSKHEPEETPASPTPSV 276
>SPCC1902.02 |mug72|SPCC663.16c|ketopantoate reductase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 574
Score = 25.0 bits (52), Expect = 7.8
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = -1
Query: 523 QASLGQALRCSAMGRSSNSRPEKDLPVVSS--SSPNTPIRLQMASAVDLLSPVMT 365
++++G + R ++ N+R P+ S PN+ ++ AS V+L SP++T
Sbjct: 368 RSTIGISNRIGSVDDLLNTRQFTSSPIGGSMPKGPNSIYKIPSASMVNLSSPLVT 422
>SPBC902.02c |ctf18|chl12|DNA replication factor C complex subunit
Ctf18|Schizosaccharomyces pombe|chr 2|||Manual
Length = 960
Score = 25.0 bits (52), Expect = 7.8
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = -2
Query: 426 RIHRYACRWLRQWTCC 379
R+HR A W++ W C
Sbjct: 370 RVHRAAMHWIKAWDPC 385
>SPAC11E3.13c |||1,3-beta-glucanosyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 510
Score = 25.0 bits (52), Expect = 7.8
Identities = 11/41 (26%), Positives = 23/41 (56%)
Frame = -3
Query: 431 LSEYTDTPADGFGSGLVVTGDDDYANTGSATTNDRVENFFT 309
+S+ +T + + S TGD DY+++ + T +++FT
Sbjct: 321 ISKNYETLKEKYASAANYTGDGDYSSSPATLTCPADDSYFT 361
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,384,125
Number of Sequences: 5004
Number of extensions: 50289
Number of successful extensions: 186
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 186
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 242064240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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