Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20789
(571 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_5248| Best HMM Match : No HMM Matches (HMM E-Value=.) 133 1e-31
SB_227| Best HMM Match : E1-E2_ATPase (HMM E-Value=0) 68 5e-12
SB_42324| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 1e-11
SB_33263| Best HMM Match : Hydrolase (HMM E-Value=0.052) 62 2e-10
SB_47271| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 3e-08
SB_52615| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_21895| Best HMM Match : E1-E2_ATPase (HMM E-Value=0.008) 37 0.010
SB_4795| Best HMM Match : CLN3 (HMM E-Value=0.058) 31 0.66
SB_25408| Best HMM Match : ABC_tran (HMM E-Value=0) 31 0.66
SB_56504| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.88
SB_39021| Best HMM Match : M (HMM E-Value=5.3e-06) 29 2.0
SB_14128| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_8591| Best HMM Match : DUF601 (HMM E-Value=0.23) 29 3.5
SB_14419| Best HMM Match : E1-E2_ATPase (HMM E-Value=0) 28 4.7
SB_53102| Best HMM Match : CUB (HMM E-Value=3.3e-40) 28 4.7
SB_8425| Best HMM Match : EGF (HMM E-Value=0) 28 4.7
SB_318| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_55131| Best HMM Match : fn3 (HMM E-Value=0.0083) 27 8.2
SB_41088| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2
SB_18020| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2
SB_4670| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2
SB_49728| Best HMM Match : PNPase (HMM E-Value=5.1) 27 8.2
SB_7893| Best HMM Match : 7tm_1 (HMM E-Value=1.8e-08) 27 8.2
>SB_5248| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1311
Score = 133 bits (321), Expect = 1e-31
Identities = 63/87 (72%), Positives = 72/87 (82%)
Frame = +3
Query: 246 QILTYEVNLTFVGVVGMLDPPRKEVFDSIVRCRAAGIRVIVITGDNKSTAEAICRRIGVF 425
+ + YE ++TFVGV GMLDPPR EV D+I C AGIRVIVITGDNK+TAEAICRRI VF
Sbjct: 601 KFVNYESHMTFVGVAGMLDPPRPEVTDAIKLCAKAGIRVIVITGDNKATAEAICRRIEVF 660
Query: 426 GEDEDTTGKSFSGREFDDLPIAEQRSA 506
G+DEDTTG S+SGREFDDL +EQR A
Sbjct: 661 GQDEDTTGLSYSGREFDDLTPSEQREA 687
Score = 106 bits (254), Expect = 1e-23
Identities = 49/81 (60%), Positives = 59/81 (72%)
Frame = +1
Query: 10 SRLGNGPKLFVKGAPEGVLERCTHARVGTSKVPLTTTLKNRILDLTRQYGTGRDTLRCLA 189
S L PK+FVKGAPEG+L+RC RVG K P+T +K +ILDL + YGTG DTLRCLA
Sbjct: 522 SFLDGKPKMFVKGAPEGILDRCDFVRVGNKKHPMTPKMKAQILDLIKAYGTGADTLRCLA 581
Query: 190 LATADNPLKPDEMDLGDSTKF 252
LAT D+P+ P +MDL S KF
Sbjct: 582 LATVDDPIAPSKMDLEASEKF 602
Score = 34.7 bits (76), Expect = 0.054
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +2
Query: 521 LFSRVEPAHKSKIVEYL 571
LFSRVEP+HKSKIV YL
Sbjct: 693 LFSRVEPSHKSKIVTYL 709
>SB_227| Best HMM Match : E1-E2_ATPase (HMM E-Value=0)
Length = 1003
Score = 68.1 bits (159), Expect = 5e-12
Identities = 28/58 (48%), Positives = 44/58 (75%)
Frame = +3
Query: 270 LTFVGVVGMLDPPRKEVFDSIVRCRAAGIRVIVITGDNKSTAEAICRRIGVFGEDEDT 443
L FVG++ M+DPPR V D++ +CR+AGI+VI++TGD+ TA+AI + +G+ E +T
Sbjct: 598 LCFVGLMSMIDPPRAAVPDAVSKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGTET 655
>SB_42324| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 523
Score = 66.9 bits (156), Expect = 1e-11
Identities = 27/58 (46%), Positives = 43/58 (74%)
Frame = +3
Query: 270 LTFVGVVGMLDPPRKEVFDSIVRCRAAGIRVIVITGDNKSTAEAICRRIGVFGEDEDT 443
L FVG++ M+DPPR V D++ +CR+AGI+V ++TGD+ TA+AI + +G+ E +T
Sbjct: 8 LCFVGLMSMIDPPRAAVPDAVAKCRSAGIKVFMVTGDHPITAKAIAQGVGIISEGTET 65
>SB_33263| Best HMM Match : Hydrolase (HMM E-Value=0.052)
Length = 335
Score = 62.5 bits (145), Expect = 2e-10
Identities = 35/90 (38%), Positives = 56/90 (62%), Gaps = 6/90 (6%)
Frame = +3
Query: 267 NLTFVGVVGMLDPPRKEVFDSIVRCRAAGIRVIVITGDNKSTAEAICRRIGVFGEDEDT- 443
+LT + VVG+ DP R++V ++I +C AGIRV +++GD+ TA A+ R+G+ DED
Sbjct: 194 DLTLMAVVGIEDPIREKVPEAIWKCDRAGIRVCMVSGDSIQTARAVAARVGILKPDEDIL 253
Query: 444 --TGKSFSG--REFDDLPIAEQ-RSAWPRL 518
TG+ F+ R+ D ++ S WP+L
Sbjct: 254 MYTGQEFNSYIRDPDGKVNTDRFNSMWPKL 283
>SB_47271| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 811
Score = 55.6 bits (128), Expect = 3e-08
Identities = 34/97 (35%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
Frame = +3
Query: 270 LTFVGVVGMLDPPRKEVFDSIVRCRAAGIRVIVITGDNKSTAEAICRRIGVFGEDED--- 440
+T + + G+ DP R+EV +I +C+ AGI V ++TGDN +TA +I + G+ D+D
Sbjct: 647 MTAIAIAGIEDPVRQEVPAAIKKCQQAGIVVRMVTGDNVNTARSIAGKCGILEPDKDFLV 706
Query: 441 TTGKSFSGREFDDLPIAEQR---SAWPRLACSRAWSP 542
GK F+ D Q+ WPRL SP
Sbjct: 707 LDGKEFNKLIRDSNGRVSQKKFDEIWPRLRVLARSSP 743
>SB_52615| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1154
Score = 50.0 bits (114), Expect = 1e-06
Identities = 25/71 (35%), Positives = 43/71 (60%)
Frame = +3
Query: 270 LTFVGVVGMLDPPRKEVFDSIVRCRAAGIRVIVITGDNKSTAEAICRRIGVFGEDEDTTG 449
LT++G++G+LDPPR V +++ +G++V +ITGD++ TA I +G+ + T
Sbjct: 580 LTYLGIMGLLDPPRNGVREAVRTLLDSGVQVKMITGDSRETAITIAELLGIHFKGRPT-- 637
Query: 450 KSFSGREFDDL 482
SG E + L
Sbjct: 638 --LSGEELEAL 646
Score = 32.7 bits (71), Expect = 0.22
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +1
Query: 37 FVKGAPEGVLERCTHARVGTSKVPLTTTLKNRILD 141
+VKGAPE V+ +CT S VP+T RI D
Sbjct: 522 YVKGAPENVMRQCTSYYKNGSAVPMTAKDVERIGD 556
>SB_21895| Best HMM Match : E1-E2_ATPase (HMM E-Value=0.008)
Length = 659
Score = 37.1 bits (82), Expect = 0.010
Identities = 19/45 (42%), Positives = 29/45 (64%)
Frame = +3
Query: 261 EVNLTFVGVVGMLDPPRKEVFDSIVRCRAAGIRVIVITGDNKSTA 395
E +LTFVG++ M + ++E I R + A IR +++TGDN TA
Sbjct: 556 ESDLTFVGLLIMQNALKEESTPVIHRLQEASIRTVMVTGDNMLTA 600
>SB_4795| Best HMM Match : CLN3 (HMM E-Value=0.058)
Length = 878
Score = 31.1 bits (67), Expect = 0.66
Identities = 21/65 (32%), Positives = 26/65 (40%)
Frame = -3
Query: 530 ARTGEPWPGAALLGDGQVIELATGERFASGIFVLSEYTDTPADGFGSGLVVTGDDDYANT 351
ARTG + A G + TG F + S YT T GS +T Y NT
Sbjct: 815 ARTGSSYTMTAYTGSNYTMTAYTGSNFTMTAYTGSNYTMTAYT--GSSYTMTAHTGYNNT 872
Query: 350 GSATT 336
+A T
Sbjct: 873 MTAHT 877
Score = 27.9 bits (59), Expect = 6.2
Identities = 16/66 (24%), Positives = 25/66 (37%)
Frame = -3
Query: 530 ARTGEPWPGAALLGDGQVIELATGERFASGIFVLSEYTDTPADGFGSGLVVTGDDDYANT 351
ARTG + A G ++ TG + + +S YT T G + +Y T
Sbjct: 745 ARTGSYYTMTAYTGSNYIMTGHTGSYYTMTAYTVSSYTMTAYTGSNYTMTAYTGSNYTMT 804
Query: 350 GSATTN 333
+N
Sbjct: 805 AHTVSN 810
Score = 27.5 bits (58), Expect = 8.2
Identities = 22/75 (29%), Positives = 28/75 (37%), Gaps = 8/75 (10%)
Frame = -3
Query: 536 PRARTGEPWPGAALLGDGQVIELATGERFASGIFVLSEYTDTPADGF--------GSGLV 381
P A TG + A G + TG + + S YT T GF GS
Sbjct: 283 PGAYTGSNYTMTAYTGSNYTMTAHTGSSYTMTAYTGSNYTMTAYTGFNYIMTAYTGSNYT 342
Query: 380 VTGDDDYANTGSATT 336
+T Y NT +A T
Sbjct: 343 MTAYTGYNNTMTAYT 357
>SB_25408| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1636
Score = 31.1 bits (67), Expect = 0.66
Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +3
Query: 297 LDP-PRKEVFDSIVRCRAAGIRVIVITGDNKSTAEAICRRIGV 422
+DP R+ ++D++ R RA G R I+IT + +A+C R+ +
Sbjct: 1482 MDPVARRLLWDALSRVRAEG-RCIIITSHSMEECDALCTRLAI 1523
>SB_56504| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 292
Score = 30.7 bits (66), Expect = 0.88
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 2/99 (2%)
Frame = +1
Query: 1 LKPSRLGNGPKLFVKGAPEGVLERCTHARVGTSKVPLTTTLKNRILDLTRQYGTGRDTLR 180
L P++LG G +P+ VL + + SK +++ T++ G+G+DTL
Sbjct: 125 LSPAKLGKGTSKLSPSSPK-VLSKVSDQDTVKSK-------RSKFQKFTKKKGSGKDTLL 176
Query: 181 CLALATADNPLKPDEMDL--GDSTKF*LTKSTLRSSESS 291
+ LK +D+ G ST T+ST+ S+ SS
Sbjct: 177 KKSFKVRQERLKRKVLDVCDGMSTSESGTESTVSSTTSS 215
>SB_39021| Best HMM Match : M (HMM E-Value=5.3e-06)
Length = 1691
Score = 29.5 bits (63), Expect = 2.0
Identities = 19/61 (31%), Positives = 27/61 (44%)
Frame = +1
Query: 64 LERCTHARVGTSKVPLTTTLKNRILDLTRQYGTGRDTLRCLALATADNPLKPDEMDLGDS 243
L C H + G + + L N+ LDL + R TLR L +T + D +L D
Sbjct: 682 LVHCEHRKAGGRRESIVWKLPNQFLDLKSKIWRKRATLRRLIRST--QAIAHDSYELNDI 739
Query: 244 T 246
T
Sbjct: 740 T 740
>SB_14128| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1138
Score = 28.7 bits (61), Expect = 3.5
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +1
Query: 34 LFVKGAPEGVLERCTHARVGTSKVP--LTTTLKNRILDLTRQYGTGRDTLRCLALA 195
++ KGA VL R THA V + +TL N+I Y RD LR L +A
Sbjct: 663 MYCKGADSAVLTRLTHASYADEAVEGGVKSTLVNQIDRHLTMY--ARDGLRTLCMA 716
>SB_8591| Best HMM Match : DUF601 (HMM E-Value=0.23)
Length = 3368
Score = 28.7 bits (61), Expect = 3.5
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1
Query: 448 PVVSSSSPNTPIRLQMASAVDLLSPVMTITRIPAARQRTIESKTSLRG 305
P+V SSS TPI +S +D PV I +P ++S RG
Sbjct: 1063 PIVKSSSEITPIVKSSSSLLDSKKPVAAI--VPDISTTDVKSNVDTRG 1108
>SB_14419| Best HMM Match : E1-E2_ATPase (HMM E-Value=0)
Length = 543
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 34 LFVKGAPEGVLERCTHARVGTSKVPLTTTLK 126
L +KGAPE VL+RC+ + PL +K
Sbjct: 473 LLMKGAPERVLDRCSTILIKGELKPLDDDMK 503
>SB_53102| Best HMM Match : CUB (HMM E-Value=3.3e-40)
Length = 644
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +2
Query: 191 WPRPITPSNPTKWILVTPPNSNLRSQPYVRRSRRHVG 301
+PRP P+ W+L P N+R +R SR G
Sbjct: 354 YPRPYPPNQDCVWVLTAPEGHNVRLT--LRSSRLETG 388
>SB_8425| Best HMM Match : EGF (HMM E-Value=0)
Length = 1955
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = -3
Query: 443 GIFVLSEYTDTPADGFGSGLVVTGDDDYANTGSATTNDR 327
G+ VL + DT DGF + TGD N + D+
Sbjct: 788 GVMVLGQEQDTVGDGFNAEEAFTGDISQMNVWNTFLTDK 826
>SB_318| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1081
Score = 27.9 bits (59), Expect = 6.2
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +3
Query: 351 GIRVIVITGDNKSTAEAICRRIGVFGEDEDTTGKSFSG-REFDDLPIAEQRSAW 509
G+RV+ G+ + + A CRR+ V GE E + S R + ++E S W
Sbjct: 537 GVRVV---GEFELSESATCRRVRVVGECESSESASCRRVRVVGECELSESASCW 587
>SB_55131| Best HMM Match : fn3 (HMM E-Value=0.0083)
Length = 1266
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -3
Query: 95 VPTRACVQRSSTPSGAPLTNS 33
VPT C +TPS P TNS
Sbjct: 935 VPTNCCPSGETTPSAVPWTNS 955
>SB_41088| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 27.5 bits (58), Expect = 8.2
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +3
Query: 261 EVNLTFVGVVGMLDPPRKEVFDSIVRCRAAGIRVIVITGDNKSTAEAICRRI 416
E L FVG V + P + + + I + + + V +ITGDN TA + + +
Sbjct: 310 ESQLQFVGFVVIACPLKMDSKNVIKQIQESSHHVTMITGDNPLTACHVAKEL 361
>SB_18020| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 170
Score = 27.5 bits (58), Expect = 8.2
Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = +3
Query: 453 SFSGREFDDLPIAEQR---SAWPRLACSRAWSPRTSLRS 560
SFS EFDD+ A +R +A P LA S P T L S
Sbjct: 29 SFSDGEFDDIQRAVERRANAAEPELAVSNEEEPTTKLFS 67
>SB_4670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1012
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = -3
Query: 110 RGTLLVPTRACVQRSSTPSGAPLTNSLGPL 21
R + PTR S GAPL NSLG L
Sbjct: 449 RSSACPPTRGSTSSGSGAFGAPLINSLGVL 478
>SB_49728| Best HMM Match : PNPase (HMM E-Value=5.1)
Length = 287
Score = 27.5 bits (58), Expect = 8.2
Identities = 26/87 (29%), Positives = 36/87 (41%)
Frame = +1
Query: 37 FVKGAPEGVLERCTHARVGTSKVPLTTTLKNRILDLTRQYGTGRDTLRCLALATADNPLK 216
F++G E LE K TLK+ IL ++ R ++ A N L
Sbjct: 126 FIEGDAEARLELALEENWEKEKEKFVETLKHIILSPSQPI---RRLFYSISKALK-NKLF 181
Query: 217 PDEMDLGDSTKF*LTKSTLRSSESSAC 297
PDE +L +TKSTL + S C
Sbjct: 182 PDERELRTIENAGVTKSTLDEAVDSLC 208
>SB_7893| Best HMM Match : 7tm_1 (HMM E-Value=1.8e-08)
Length = 391
Score = 27.5 bits (58), Expect = 8.2
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +3
Query: 438 DTTGKSFSGREFDDLPIAEQRSAWPRL 518
D +G+ ++ D+P +Q SAW R+
Sbjct: 235 DISGRKVKNLDYSDVPTLKQESAWARV 261
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,298,636
Number of Sequences: 59808
Number of extensions: 458046
Number of successful extensions: 1472
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1289
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1471
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1349364063
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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