Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20788
         (411 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC069294-1|AAH69294.1|  111|Homo sapiens beta defensin 126, prep...    29   7.9  
AL360078-2|CAC17684.1|  111|Homo sapiens defensin, beta 126 prot...    29   7.9  
AK128082-1|BAC87263.1|  236|Homo sapiens protein ( Homo sapiens ...    29   7.9  
AJ236910-1|CAC27121.1|  111|Homo sapiens ESP13.2 protein protein.      29   7.9  
AF525928-1|AAP47221.1|  111|Homo sapiens beta-defensin 26 precur...    29   7.9  

>BC069294-1|AAH69294.1|  111|Homo sapiens beta defensin 126,
           preproprotein protein.
          Length = 111

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
 Frame = +2

Query: 56  CSPPARASLNYPRTLL-TKTSRRNCTTASSPATTTVLSVRAWNMRAKARAP 205
           C  PA    NYP   + TKT+R +  TA++ ATTT++   A +M + A  P
Sbjct: 58  CCVPADRRANYPVFCVQTKTTRISTVTATT-ATTTLMMTTA-SMSSMAPTP 106


>AL360078-2|CAC17684.1|  111|Homo sapiens defensin, beta 126
           protein.
          Length = 111

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
 Frame = +2

Query: 56  CSPPARASLNYPRTLL-TKTSRRNCTTASSPATTTVLSVRAWNMRAKARAP 205
           C  PA    NYP   + TKT+R +  TA++ ATTT++   A +M + A  P
Sbjct: 58  CCVPADRRANYPVFCVQTKTTRISTVTATT-ATTTLMMTTA-SMSSMAPTP 106


>AK128082-1|BAC87263.1|  236|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46203 fis, clone TESTI4008305. ).
          Length = 236

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = +2

Query: 44  LXCACSPPARASLNYPRTLLTKTSRRNCTTASSPATTTVLSVRAWNMRA 190
           L C  +P    S++ PR+L+++ SRR    + S +T   +S   W  RA
Sbjct: 51  LYCLMTP----SMSRPRSLMSRRSRRTRRMSESVSTKIFMSRSWWRQRA 95


>AJ236910-1|CAC27121.1|  111|Homo sapiens ESP13.2 protein protein.
          Length = 111

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
 Frame = +2

Query: 56  CSPPARASLNYPRTLL-TKTSRRNCTTASSPATTTVLSVRAWNMRAKARAP 205
           C  PA    NYP   + TKT+R +  TA++ ATTT++   A +M + A  P
Sbjct: 58  CCVPADRRANYPVFCVQTKTTRISTVTATT-ATTTLMMTTA-SMSSMAPTP 106


>AF525928-1|AAP47221.1|  111|Homo sapiens beta-defensin 26 precursor
           protein.
          Length = 111

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
 Frame = +2

Query: 56  CSPPARASLNYPRTLL-TKTSRRNCTTASSPATTTVLSVRAWNMRAKARAP 205
           C  PA    NYP   + TKT+R +  TA++ ATTT++   A +M + A  P
Sbjct: 58  CCVPADRRANYPVFCVQTKTTRISTVTATT-ATTTLMMTTA-SMSSMAPTP 106


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,062,872
Number of Sequences: 237096
Number of extensions: 1164307
Number of successful extensions: 6492
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6488
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3030544982
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)