Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20788
         (411 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-1554|AAF48000.3| 3539|Drosophila melanogaster CG11122-P...    29   1.8  
AY071309-1|AAL48931.1|  316|Drosophila melanogaster RE33721p pro...    28   5.5  
AE014134-2459|AAF53372.1|  377|Drosophila melanogaster CG16876-P...    28   5.5  
AE014134-3108|AAF53807.1|  284|Drosophila melanogaster CG13083-P...    27   7.3  
AE014134-3107|AAS64720.1|  316|Drosophila melanogaster CG13083-P...    27   7.3  

>AE014298-1554|AAF48000.3| 3539|Drosophila melanogaster CG11122-PA
           protein.
          Length = 3539

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 17/38 (44%), Positives = 22/38 (57%)
 Frame = +2

Query: 53  ACSPPARASLNYPRTLLTKTSRRNCTTASSPATTTVLS 166
           +CSP + ++     T  T+TS  N T  SS ATTTV S
Sbjct: 747 SCSPSSSSASTLLSTA-TRTSMSNSTCTSSAATTTVSS 783


>AY071309-1|AAL48931.1|  316|Drosophila melanogaster RE33721p
           protein.
          Length = 316

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +3

Query: 129 QQHPHRRLRQCCPSELGI*EPRQGLHHPECS 221
           +Q  HR +R+CCP  L +     GL  P CS
Sbjct: 67  EQVTHRLVRECCPGYLQV---ESGLCEPICS 94


>AE014134-2459|AAF53372.1|  377|Drosophila melanogaster CG16876-PA
           protein.
          Length = 377

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +3

Query: 129 QQHPHRRLRQCCPSELGI*EPRQGLHHPECS 221
           +Q  HR +R+CCP  L +     GL  P CS
Sbjct: 67  EQVTHRLVRECCPGYLQV---ESGLCEPICS 94


>AE014134-3108|AAF53807.1|  284|Drosophila melanogaster CG13083-PA,
           isoform A protein.
          Length = 284

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = +3

Query: 249 EHMEYCYKLWVGNGQ 293
           E  EY YKLW G GQ
Sbjct: 270 EEAEYLYKLWYGKGQ 284


>AE014134-3107|AAS64720.1|  316|Drosophila melanogaster CG13083-PB,
           isoform B protein.
          Length = 316

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = +3

Query: 249 EHMEYCYKLWVGNGQ 293
           E  EY YKLW G GQ
Sbjct: 302 EEAEYLYKLWYGKGQ 316


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,827,592
Number of Sequences: 53049
Number of extensions: 356890
Number of successful extensions: 1075
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1004
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1072
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1209331668
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)