Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20788
(411 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g59210.2 68418.m07421 myosin heavy chain-related contains wea... 33 0.075
At5g59210.1 68418.m07420 myosin heavy chain-related contains wea... 33 0.075
At5g10290.1 68418.m01194 leucine-rich repeat family protein / pr... 30 0.53
At1g69390.1 68414.m07966 chloroplast division protein, putative ... 30 0.70
At4g13310.2 68417.m02080 cytochrome P450 71A20, putative (CYP71A... 28 2.1
At4g13310.1 68417.m02081 cytochrome P450 71A20, putative (CYP71A... 28 2.1
At4g15480.1 68417.m02366 UDP-glucoronosyl/UDP-glucosyl transfera... 28 2.8
At2g25760.2 68415.m03092 protein kinase family protein contains ... 27 3.7
At2g25760.1 68415.m03091 protein kinase family protein contains ... 27 3.7
At1g64255.1 68414.m07280 SWIM zinc finger family protein contain... 27 3.7
At4g24840.1 68417.m03558 expressed protein 27 4.9
At2g33860.1 68415.m04157 auxin-responsive factor (ARF3) / ETTIN ... 27 4.9
At4g15490.1 68417.m02367 UDP-glucoronosyl/UDP-glucosyl transfera... 27 6.5
At2g15490.1 68415.m01772 UDP-glucoronosyl/UDP-glucosyl transfera... 26 8.6
At1g78570.1 68414.m09157 NAD-dependent epimerase/dehydratase fam... 26 8.6
At1g67690.1 68414.m07724 peptidase M3 family protein / thimet ol... 26 8.6
>At5g59210.2 68418.m07421 myosin heavy chain-related contains weak
similarity to Myosin heavy chain, gizzard smooth muscle
(Swiss-Prot:P10587) [Gallus gallus]
Length = 433
Score = 33.1 bits (72), Expect = 0.075
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Frame = +1
Query: 82 ELSADTSNQDLE-EKLY--NSILTGDYDSAVRQSLEYESQGKGSIIQNVVNNLIIDKRRN 252
+L + NQ E EKL+ NS L+ Y ++ S ++E+Q K + QNV ++DK R
Sbjct: 285 KLLMEIDNQSSEIEKLFEENSNLSASYQESINISNQWENQVKECLKQNVELREVLDKLRT 344
Query: 253 TWSTATSCG 279
+ + S G
Sbjct: 345 EQAGSFSRG 353
>At5g59210.1 68418.m07420 myosin heavy chain-related contains weak
similarity to Myosin heavy chain, gizzard smooth muscle
(Swiss-Prot:P10587) [Gallus gallus]
Length = 434
Score = 33.1 bits (72), Expect = 0.075
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Frame = +1
Query: 82 ELSADTSNQDLE-EKLY--NSILTGDYDSAVRQSLEYESQGKGSIIQNVVNNLIIDKRRN 252
+L + NQ E EKL+ NS L+ Y ++ S ++E+Q K + QNV ++DK R
Sbjct: 286 KLLMEIDNQSSEIEKLFEENSNLSASYQESINISNQWENQVKECLKQNVELREVLDKLRT 345
Query: 253 TWSTATSCG 279
+ + S G
Sbjct: 346 EQAGSFSRG 354
>At5g10290.1 68418.m01194 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 613
Score = 30.3 bits (65), Expect = 0.53
Identities = 16/61 (26%), Positives = 29/61 (47%)
Frame = +1
Query: 121 KLYNSILTGDYDSAVRQSLEYESQGKGSIIQNVVNNLIIDKRRNTWSTATSCGSATDRKL 300
K+Y +L + AV++ ++ES G + Q V + + RN C + T+R L
Sbjct: 303 KVYKGVLPDNTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTQTERLL 362
Query: 301 L 303
+
Sbjct: 363 V 363
>At1g69390.1 68414.m07966 chloroplast division protein, putative
(MinE1) identical to chloroplast division protein
homolog MinE1 GI:17511220 from [Arabidopsis thaliana]
Length = 229
Score = 29.9 bits (64), Expect = 0.70
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +1
Query: 55 MLAASAGVVELSADTSNQDLEEKLYNSILTGDYD 156
+LA + G ELS + Q++E LYN+I G +D
Sbjct: 70 VLARNTGDYELSPSPAEQEIESFLYNAINMGFFD 103
>At4g13310.2 68417.m02080 cytochrome P450 71A20, putative (CYP71A20)
Identical to Cytochrome P450 (SP:Q9T0K2) [Arabidopsis
thaliana]; similar to cytochrome P450 71A4, Solanum
melongena, PIR2:S36805
Length = 390
Score = 28.3 bits (60), Expect = 2.1
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 121 KLYNSILTGDYDSAVRQSLEYESQGKGSIIQNVVNNLII 237
K+ + IL+G D A EY Q K IQN++NN ++
Sbjct: 103 KVVDKILSGGRDVAFAPYGEYWRQMKSICIQNLLNNKMV 141
>At4g13310.1 68417.m02081 cytochrome P450 71A20, putative (CYP71A20)
Identical to Cytochrome P450 (SP:Q9T0K2) [Arabidopsis
thaliana]; similar to cytochrome P450 71A4, Solanum
melongena, PIR2:S36805
Length = 497
Score = 28.3 bits (60), Expect = 2.1
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 121 KLYNSILTGDYDSAVRQSLEYESQGKGSIIQNVVNNLII 237
K+ + IL+G D A EY Q K IQN++NN ++
Sbjct: 103 KVVDKILSGGRDVAFAPYGEYWRQMKSICIQNLLNNKMV 141
>At4g15480.1 68417.m02366 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 490
Score = 27.9 bits (59), Expect = 2.8
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -1
Query: 297 FPVRCRPTACSSTPCVPSLVNDQVVNYI 214
FP P PCVP L ND++ +++
Sbjct: 174 FPTETEPELDVKLPCVPVLKNDEIPSFL 201
>At2g25760.2 68415.m03092 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 676
Score = 27.5 bits (58), Expect = 3.7
Identities = 20/68 (29%), Positives = 27/68 (39%)
Frame = +1
Query: 154 DSAVRQSLEYESQGKGSIIQNVVNNLIIDKRRNTWSTATSCGSATDRKLLESTSH*TLDS 333
D + Y S+G I + N I TW A S RKL + T S
Sbjct: 593 DQVIELDFLYPSEG---IHRRWENGYRITSVAATWDQAAFVLSVPRRKLTDETQETLRTS 649
Query: 334 SWPGNYVK 357
++P N+VK
Sbjct: 650 AFPSNHVK 657
>At2g25760.1 68415.m03091 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 673
Score = 27.5 bits (58), Expect = 3.7
Identities = 20/68 (29%), Positives = 27/68 (39%)
Frame = +1
Query: 154 DSAVRQSLEYESQGKGSIIQNVVNNLIIDKRRNTWSTATSCGSATDRKLLESTSH*TLDS 333
D + Y S+G I + N I TW A S RKL + T S
Sbjct: 590 DQVIELDFLYPSEG---IHRRWENGYRITSVAATWDQAAFVLSVPRRKLTDETQETLRTS 646
Query: 334 SWPGNYVK 357
++P N+VK
Sbjct: 647 AFPSNHVK 654
>At1g64255.1 68414.m07280 SWIM zinc finger family protein contains
Pfam profile PF04434: SWIM zinc finger
Length = 750
Score = 27.5 bits (58), Expect = 3.7
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 258 EYCYKLWVGNGQEIVRKYFPLNF 326
EY KL + +G + KYFPL F
Sbjct: 396 EYQLKLMIASGVDAANKYFPLAF 418
>At4g24840.1 68417.m03558 expressed protein
Length = 756
Score = 27.1 bits (57), Expect = 4.9
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +3
Query: 282 GNGQEIVRKYFPLNFRLIMARKLCQDHLQKLQPRSEXR 395
G+ EI R+Y+ L ++ + Q LQKL+ ++ R
Sbjct: 655 GSVSEITRRYYELAADVVSVARKTQSSLQKLRQNAQRR 692
>At2g33860.1 68415.m04157 auxin-responsive factor (ARF3) / ETTIN
protein (ETT) identical to ETTIN GB:AF007788 from
[Arabidopsis thaliana]
Length = 608
Score = 27.1 bits (57), Expect = 4.9
Identities = 22/62 (35%), Positives = 26/62 (41%), Gaps = 3/62 (4%)
Frame = -1
Query: 306 F*QFPVRCRPTACSSTPCVPSLVNDQVVNYILDD--GXXXXXLIFQ-ALTDSTVVVAGED 136
F F R P + SS+P L N N L+D G +F LTD T VA
Sbjct: 509 FQNFSTRILPPSVSSSPSSVLLTNSNSPNGRLEDHHGGSGRCRLFGFPLTDETTAVASAT 568
Query: 135 AV 130
AV
Sbjct: 569 AV 570
>At4g15490.1 68417.m02367 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase ;simalr to
UDP-glucose:sinapate glucosyltransferase GI:9794913 from
[Brassica napus]
Length = 479
Score = 26.6 bits (56), Expect = 6.5
Identities = 8/29 (27%), Positives = 17/29 (58%)
Frame = -1
Query: 300 QFPVRCRPTACSSTPCVPSLVNDQVVNYI 214
+FP + P PC+P L +D++ +++
Sbjct: 161 KFPTKTEPDISVEIPCLPLLKHDEIPSFL 189
>At2g15490.1 68415.m01772 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 484
Score = 26.2 bits (55), Expect = 8.6
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = +1
Query: 130 NSILTGDYDSAVRQSLEYESQGKGSIIQNVVNNLIIDKRRNTWSTATSCG 279
N + TG+ + + + E ++GKG II+ ++I + T CG
Sbjct: 326 NQVGTGENEDWLPKGFEERNKGKGLIIRGWAPQVLILDHKAIGGFVTHCG 375
>At1g78570.1 68414.m09157 NAD-dependent epimerase/dehydratase family
protein similar to dTDP-glucose 4,6-dehydratase from
Aneurinibacillus thermoaerophilus GI:16357461, RmlB from
Leptospira borgpetersenii GI:4234803; contains Pfam
profile PF01370 NAD dependent epimerase/dehydratase
family
Length = 669
Score = 26.2 bits (55), Expect = 8.6
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 65 PARASLNYPRTLLTKTSRRNCTTASSPATTTVL 163
P + LN PR +TK SR N + P + TVL
Sbjct: 541 PISSDLNNPRNFITKISRYN-KVVNIPNSMTVL 572
>At1g67690.1 68414.m07724 peptidase M3 family protein / thimet
oligopeptidase family protein similar to SP|P42676
Neurolysin, mitochondrial precursor (EC 3.4.24.16)
(Mitochondrial oligopeptidase M) {Rattus norvegicus};
contains Pfam profile PF01432: Peptidase family M3
Length = 672
Score = 26.2 bits (55), Expect = 8.6
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3
Query: 300 VRKYFPLNFRLIMARKLCQD 359
+R+YFP+N L K+CQD
Sbjct: 361 IRQYFPVNLVLSGIFKICQD 380
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,413,565
Number of Sequences: 28952
Number of extensions: 160851
Number of successful extensions: 433
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 425
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 433
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 615542944
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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