Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20785
         (718 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    28   0.087
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    23   2.5  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    23   2.5  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   3.3  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    22   5.7  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   7.6  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   7.6  

>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 27.9 bits (59), Expect = 0.087
 Identities = 15/48 (31%), Positives = 27/48 (56%)
 Frame = +2

Query: 2   FGHRHAVQVSCMKVIFLILLYCFTLLIDCL*YCTVVTIVTFFDFLKRI 145
           FG   A   + + V+++++LY   +L   L   T + +VTF  F+K+I
Sbjct: 255 FGSGSATPENNVSVVYVLILY---ILESLLYMVTKLVVVTFLKFIKKI 299


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -2

Query: 420 RVISIKQEIEETDHLFMTYLLWV 352
           +VI + + IEE D  F +  +WV
Sbjct: 113 KVIEVFKNIEEVDVAFRSLAVWV 135


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -2

Query: 420 RVISIKQEIEETDHLFMTYLLWV 352
           +VI + + IEE D  F +  +WV
Sbjct: 113 KVIEVFKNIEEVDVAFRSLAVWV 135


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 12/48 (25%), Positives = 24/48 (50%)
 Frame = +2

Query: 221 VLHV*NTILVRNLTTLQSRSDYRKSNQF*SVFGVIHIKHHNESSTQSR 364
           VLH   T+L   ++T    +  R   +F ++F +    + NE++  S+
Sbjct: 387 VLHTVKTVLKTTMSTFSDITFMRTVWKFFNIFLITPFYNFNENTIHSK 434


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = -3

Query: 320 HRRLTRIDLIFDNPTYFVKLSNFELV*YFI 231
           H RL ++ ++ DN   ++ + +F    YFI
Sbjct: 148 HYRLYQLSVLIDNNMSYIIIVSFATNLYFI 177


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +2

Query: 74  LLIDCL*YCTVVTIVTFFDFLKR 142
           + I+C     +  IVT F FL R
Sbjct: 91  IFIECFVMMALTLIVTLFTFLAR 113


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +2

Query: 74  LLIDCL*YCTVVTIVTFFDFLKR 142
           + I+C     +  IVT F FL R
Sbjct: 91  IFIECFVMMALTLIVTLFTFLAR 113


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,242
Number of Sequences: 336
Number of extensions: 2872
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)