Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20785
         (718 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF129420-1|AAD29408.1| 1685|Drosophila melanogaster AXO protein.       29   6.3  
AE014296-890|AAF47929.2| 1765|Drosophila melanogaster CG18296-PA...    29   6.3  

>AF129420-1|AAD29408.1| 1685|Drosophila melanogaster AXO protein.
          Length = 1685

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 17/39 (43%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
 Frame = +1

Query: 1    LRSPTRRSSVLYESDLFNTFVLLYV-VNRLFVILHS-GD 111
            LR+    + VLY +D +N FV LY+ +NR  V L++ GD
Sbjct: 1347 LRTYDTNALVLYANDHYNNFVHLYISLNREIVFLYNYGD 1385


>AE014296-890|AAF47929.2| 1765|Drosophila melanogaster CG18296-PA
            protein.
          Length = 1765

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 17/39 (43%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
 Frame = +1

Query: 1    LRSPTRRSSVLYESDLFNTFVLLYV-VNRLFVILHS-GD 111
            LR+    + VLY +D +N FV LY+ +NR  V L++ GD
Sbjct: 1351 LRTYDTNALVLYANDHYNNFVHLYISLNREIVFLYNYGD 1389


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,463,268
Number of Sequences: 53049
Number of extensions: 447270
Number of successful extensions: 664
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 654
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 664
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3190721655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)