Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20783
(718 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_28897| Best HMM Match : Trypsin (HMM E-Value=0) 52 5e-07
SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 43 3e-04
SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 42 4e-04
SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44) 42 4e-04
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0) 42 4e-04
SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_25649| Best HMM Match : Trypsin (HMM E-Value=0) 42 5e-04
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012) 42 7e-04
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 7e-04
SB_51536| Best HMM Match : Trypsin (HMM E-Value=0) 41 9e-04
SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_50961| Best HMM Match : Trypsin (HMM E-Value=0) 40 0.002
SB_33589| Best HMM Match : Trypsin (HMM E-Value=0) 40 0.002
SB_9601| Best HMM Match : Trypsin (HMM E-Value=0) 40 0.002
SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0) 40 0.003
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 39 0.004
SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.005
SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21) 39 0.005
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 38 0.006
SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0) 38 0.006
SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12) 38 0.008
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.011
SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08) 38 0.011
SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0) 38 0.011
SB_17890| Best HMM Match : Trypsin (HMM E-Value=3.2) 38 0.011
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 37 0.014
SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23) 37 0.014
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.019
SB_17112| Best HMM Match : Trypsin (HMM E-Value=0) 36 0.025
SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.025
SB_29414| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.025
SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08) 36 0.025
SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08) 36 0.025
SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.033
SB_30267| Best HMM Match : Trypsin (HMM E-Value=0) 36 0.033
SB_17803| Best HMM Match : SRCR (HMM E-Value=0) 36 0.033
SB_10167| Best HMM Match : Trypsin (HMM E-Value=0) 35 0.076
SB_53569| Best HMM Match : EGF_CA (HMM E-Value=0) 33 0.18
SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22) 33 0.18
SB_1442| Best HMM Match : SRCR (HMM E-Value=0) 33 0.18
SB_43942| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.31
SB_40955| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.53
SB_17195| Best HMM Match : Trypsin (HMM E-Value=4.9e-06) 31 1.2
SB_45112| Best HMM Match : YscO (HMM E-Value=3) 29 2.8
SB_17196| Best HMM Match : Trypsin (HMM E-Value=0.027) 29 3.8
SB_10327| Best HMM Match : Trypsin (HMM E-Value=0) 29 3.8
SB_58823| Best HMM Match : YscO (HMM E-Value=1.5) 29 3.8
SB_21520| Best HMM Match : Trypsin (HMM E-Value=0) 29 3.8
SB_7558| Best HMM Match : TPR_MLP1_2 (HMM E-Value=2.2) 29 3.8
SB_2797| Best HMM Match : YscO (HMM E-Value=2.8) 29 5.0
SB_55505| Best HMM Match : Trypsin (HMM E-Value=0) 28 6.6
SB_45323| Best HMM Match : rve (HMM E-Value=5.3e-31) 28 8.7
SB_44747| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
>SB_28897| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 974
Score = 52.0 bits (119), Expect = 5e-07
Identities = 22/51 (43%), Positives = 32/51 (62%)
Frame = +2
Query: 545 EAKAGDWPWHVAILIRQPKSVIGVYNCGGTIISRRAVLTAGHCLFMNGSLI 697
EAKAG WPW AI ++ G + CGG +I+R V+TA HC + +G ++
Sbjct: 729 EAKAGAWPWLAAIYVK------GSFRCGGALIARDWVVTAAHCFYYDGKIV 773
>SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 551
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/48 (47%), Positives = 27/48 (56%)
Frame = +2
Query: 542 TEAKAGDWPWHVAILIRQPKSVIGVYNCGGTIISRRAVLTAGHCLFMN 685
T A DWPW ILI KS + CGGT+I V+TA HC+F N
Sbjct: 289 TTAAPHDWPWQAQILIHVDKS--WNHRCGGTLIDTEWVVTAAHCVFQN 334
>SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 249
Score = 42.7 bits (96), Expect = 3e-04
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = +2
Query: 542 TEAKAGDWPWHVAILIRQPKSVIGVYNCGGTIISRRAVLTAGHCLF 679
+E + WPW V +L + S + + CGG +I R V+TA HC+F
Sbjct: 48 SEVEPQSWPWQVHLLQSRDGSFL--HKCGGALIDREWVVTAAHCVF 91
>SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 42.7 bits (96), Expect = 3e-04
Identities = 19/44 (43%), Positives = 27/44 (61%)
Frame = +2
Query: 545 EAKAGDWPWHVAILIRQPKSVIGVYNCGGTIISRRAVLTAGHCL 676
+A WPW +++ +R G + CGGT+IS VLTAGHC+
Sbjct: 441 DAAPHSWPWQISLRVR------GKHMCGGTLISPDWVLTAGHCV 478
Score = 36.3 bits (80), Expect = 0.025
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = +2
Query: 548 AKAGDWPWHVAILIRQPKSVIGVYNCGGTIISRRAVLTAGHCL 676
A+ WPW +++ RQ + + CGG +IS R V+TA HC+
Sbjct: 852 AQPHSWPWQISL--RQGRRF---HLCGGALISDRWVVTASHCI 889
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 42.3 bits (95), Expect = 4e-04
Identities = 21/45 (46%), Positives = 26/45 (57%)
Frame = +2
Query: 542 TEAKAGDWPWHVAILIRQPKSVIGVYNCGGTIISRRAVLTAGHCL 676
T AK GDWPW Q +S G CGG++I + VLTA HC+
Sbjct: 668 TAAKQGDWPWQA-----QLRSTSGFPFCGGSLIHPQWVLTATHCV 707
Score = 29.1 bits (62), Expect = 3.8
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +2
Query: 611 GVYNCGGTIISRRAVLTAGHCL 676
G + CGG+++S V+TA HC+
Sbjct: 89 GSFICGGSLVSPTWVVTAAHCI 110
>SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44)
Length = 348
Score = 42.3 bits (95), Expect = 4e-04
Identities = 21/45 (46%), Positives = 25/45 (55%)
Frame = +2
Query: 545 EAKAGDWPWHVAILIRQPKSVIGVYNCGGTIISRRAVLTAGHCLF 679
EA G WPW V I R S + CGG +I+R VLTA HC +
Sbjct: 132 EAGHGTWPWQVGIY-RFDHSGNQMQICGGALINREWVLTAAHCFY 175
>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 657
Score = 42.3 bits (95), Expect = 4e-04
Identities = 16/43 (37%), Positives = 27/43 (62%)
Frame = +2
Query: 545 EAKAGDWPWHVAILIRQPKSVIGVYNCGGTIISRRAVLTAGHC 673
EA WPW V +++ + +NCGG++I ++ V+T+GHC
Sbjct: 255 EASPNSWPWQVDLVVNGTR-----HNCGGSLIDKQWVVTSGHC 292
>SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 42.3 bits (95), Expect = 4e-04
Identities = 22/45 (48%), Positives = 26/45 (57%)
Frame = +2
Query: 542 TEAKAGDWPWHVAILIRQPKSVIGVYNCGGTIISRRAVLTAGHCL 676
TEA WPW A+L+R P G CGG++I VLTA HCL
Sbjct: 34 TEAPINGWPWQ-AMLLRSPN---GDQFCGGSLIDPGWVLTAAHCL 74
>SB_25649| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 718
Score = 41.9 bits (94), Expect = 5e-04
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +2
Query: 545 EAKAGDWPWHVAILIRQPKSVIGVYNCGGTIISRRAVLTAGHCLF 679
EA WPW V I+++ P + + CGG++I +LT+ HC +
Sbjct: 251 EAPRNSWPWQVEIILKTPN--LTTHYCGGSLIDPYWILTSSHCFW 293
Score = 32.3 bits (70), Expect = 0.40
Identities = 10/19 (52%), Positives = 17/19 (89%)
Frame = +2
Query: 617 YNCGGTIISRRAVLTAGHC 673
+NCGG++I ++ V+T+GHC
Sbjct: 559 HNCGGSLIDKQWVVTSGHC 577
Score = 29.5 bits (63), Expect = 2.8
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 623 CGGTIISRRAVLTAGHCL 676
CGG+II V+TAGHC+
Sbjct: 10 CGGSIIDPHWVVTAGHCV 27
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 41.9 bits (94), Expect = 5e-04
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = +2
Query: 557 GDWPWHVAILIRQPKSVIGVYNCGGTIISRRAVLTAGHCLFMNGS 691
G +PW VA+ +S ++CGGT+I+ VLTA HC+ S
Sbjct: 1170 GGYPWQVALEFDTFQSNYNTFHCGGTLIAEDWVLTAAHCVVYKDS 1214
>SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012)
Length = 115
Score = 41.5 bits (93), Expect = 7e-04
Identities = 19/45 (42%), Positives = 27/45 (60%)
Frame = +2
Query: 542 TEAKAGDWPWHVAILIRQPKSVIGVYNCGGTIISRRAVLTAGHCL 676
T AK GDWPW Q ++ G CGG++I+ + +LTA HC+
Sbjct: 15 TAAKHGDWPWQA-----QLRTTSGFPYCGGSLIAPQWILTATHCV 54
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 41.5 bits (93), Expect = 7e-04
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = +2
Query: 548 AKAGDWPWHVAILIRQPKSVIGVYNCGGTIISRRAVLTAGHCLFMN 685
A+ WPW +++ R G + CGG++IS R V+TA HC+ N
Sbjct: 112 AQPHSWPWQISLRGRS-----GFHTCGGSLISDRWVVTAAHCIHRN 152
>SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 347
Score = 41.1 bits (92), Expect = 9e-04
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +2
Query: 506 KSLENTELTSVRTEAKAGDWPWHVAILIRQPKSVIGVYNCGGTIISRRAVLTAGHC 673
K NT + T AK G WPW +++ K + CGG++++ ++TA HC
Sbjct: 97 KGKGNTRIVG-GTRAKKGAWPWQISMNYVHNKVTKTPHICGGSVVAPEWIVTAAHC 151
>SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +2
Query: 542 TEAKAGDWPWHVAILIRQPKSVIGVYNCGGTIISRRAVLTAGHCLFMNG 688
T+A G WPW + +S G CGGT++ + V+TA HC++ G
Sbjct: 144 TKAPPGAWPWQAML-----RSNYGGQFCGGTLVHPQWVITAAHCVYRRG 187
>SB_50961| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 1007
Score = 40.3 bits (90), Expect = 0.002
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = +2
Query: 548 AKAGDWPWHVAILIRQPKSVIGVYNCGGTIISRRAVLTAGHCLFMN 685
AK DWPW + K + CGG++I+R V+TA HC+ N
Sbjct: 439 AKVEDWPWQAGL----KKGLDDTIVCGGSLINREWVVTAAHCIDRN 480
>SB_33589| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 289
Score = 40.3 bits (90), Expect = 0.002
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = +2
Query: 545 EAKAGDWPWHVAILIRQPKSVIGVYNCGGTIISRRAVLTAGHC 673
EA G WPW VA+L+ G CGG++++ V+TA HC
Sbjct: 59 EAAPGAWPWQVALLMN------GTQFCGGSLVNENWVVTARHC 95
>SB_9601| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 285
Score = 40.3 bits (90), Expect = 0.002
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = +2
Query: 545 EAKAGDWPWHVAILIRQPKSVIGVYNCGGTIISRRAVLTAGHC 673
EAKAG +PW +A+L ++ + CGG ++ R V+T HC
Sbjct: 34 EAKAGQFPWQIALLFKRQQ------YCGGALVHERWVVTGAHC 70
>SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 39.5 bits (88), Expect = 0.003
Identities = 22/48 (45%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Frame = +2
Query: 557 GDWPWHVAILIRQPKSVIGVYNCGGTIISRRAVLTAGHCL-FMNGSLI 697
G +PWHV LIR+ V CGG++IS + VLTA HC+ NG+++
Sbjct: 117 GAYPWHV--LIRKGGHVA----CGGSLISEKWVLTAAHCVTHRNGNIL 158
>SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0)
Length = 1019
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = +2
Query: 548 AKAGDWPWHVAILIRQPKSVIGVYNCGGTIISRRAVLTAGHCL 676
A GDWPW Q ++ G CGG++I VLTA HC+
Sbjct: 397 ANPGDWPWQA-----QLRTTTGFPYCGGSLIHSNWVLTAAHCI 434
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 39.1 bits (87), Expect = 0.004
Identities = 18/46 (39%), Positives = 28/46 (60%)
Frame = +2
Query: 548 AKAGDWPWHVAILIRQPKSVIGVYNCGGTIISRRAVLTAGHCLFMN 685
A+ WPW +++ +P ++CGGT+IS R V+TA HC+ N
Sbjct: 36 AQPHSWPWQISL---RPYG--RYHSCGGTLISDRWVVTASHCVHKN 76
Score = 31.1 bits (67), Expect = 0.93
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2
Query: 545 EAKAGDWPWHVAILIRQPKSVIGVYNCGGTIISRRAVLTAGHCL 676
EA + WPW ++ R+ +S + CG T+I +TA HC+
Sbjct: 331 EAVSHSWPWIASL--RKGRS--NYHTCGATLIRPGWAITAAHCV 370
>SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 656
Score = 38.7 bits (86), Expect = 0.005
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +2
Query: 545 EAKAGDWPWHVAILIRQPKSVIGVYNCGGTIISRRAVLTAGHCL 676
+A G+WPW + + P + CGG++I+ + VLTAGHC+
Sbjct: 67 DATLGEWPWQAWLHVT-PHGFV----CGGSLIAPQWVLTAGHCI 105
>SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21)
Length = 418
Score = 38.7 bits (86), Expect = 0.005
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +2
Query: 542 TEAKAGDWPWHVAILIRQPKSVIGVYNCGGTIISRRAVLTAGHC 673
T+A G+WPW V++ + V CGGT+++ VLTA C
Sbjct: 262 TDAAVGEWPWQVSLYLTHYGPV-----CGGTLLTSEWVLTAARC 300
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 38.3 bits (85), Expect = 0.006
Identities = 19/45 (42%), Positives = 23/45 (51%)
Frame = +2
Query: 542 TEAKAGDWPWHVAILIRQPKSVIGVYNCGGTIISRRAVLTAGHCL 676
TEA WPW + +S G CGG++I VLTA HCL
Sbjct: 264 TEAPVNGWPWQAML-----RSAGGSQFCGGSLIHPEWVLTAAHCL 303
>SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 620
Score = 38.3 bits (85), Expect = 0.006
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +2
Query: 545 EAKAGDWPWHVAILIRQPKSVIGVYNCGGTIISRRAVLTAGHCL 676
+A G WPW +A+ R G + CGG+++S V+TA HC+
Sbjct: 482 DAIPGAWPWQIALKSR------GNFICGGSLVSSTWVVTAAHCV 519
>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 530
Score = 38.3 bits (85), Expect = 0.006
Identities = 19/45 (42%), Positives = 23/45 (51%)
Frame = +2
Query: 542 TEAKAGDWPWHVAILIRQPKSVIGVYNCGGTIISRRAVLTAGHCL 676
TEA WPW + +S G CGG++I VLTA HCL
Sbjct: 224 TEAPVNGWPWQAML-----RSAGGSQFCGGSLIHPEWVLTAAHCL 263
>SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12)
Length = 227
Score = 37.9 bits (84), Expect = 0.008
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2
Query: 545 EAKAGDWPWHVAILIRQPKSVIGVYNCGGTIISRRAVLTAGHCL 676
+A A WPW +++ + K + CGG++I VLTA HC+
Sbjct: 43 DATAHAWPWQISLRMMSKKGD-DYHFCGGSLIDSEWVLTAAHCV 85
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 37.9 bits (84), Expect = 0.008
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +2
Query: 548 AKAGDWPWHVAILIRQPKSVIGVYNCGGTIISRRAVLTAGHCL 676
A+ G+WPW V++ + + CGG +IS VLTA HC+
Sbjct: 552 AEHGEWPWQVSMKLNSSSLP---HICGGNVISPWWVLTAAHCV 591
>SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1031
Score = 37.5 bits (83), Expect = 0.011
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +2
Query: 542 TEAKAGDWPWHVAILIRQPKSVIGVYNCGGTIISRRAVLTAGHCL 676
T A+ G WPW + + G + CGGT++ R V+TA HC+
Sbjct: 253 TTAQRGAWPWQAML-----RYYNGNHFCGGTLVHPRWVVTASHCV 292
>SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08)
Length = 153
Score = 37.5 bits (83), Expect = 0.011
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = +2
Query: 542 TEAKAGDWPWHVAILIRQPKSVIGVYNCGGTIISRRAVLTAGHCL 676
T A WPW Q +S G CGGT++ R V+TA HC+
Sbjct: 28 TAAPKNAWPWQA-----QLRSASGFPFCGGTLVHPRFVVTASHCI 67
>SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0)
Length = 687
Score = 37.5 bits (83), Expect = 0.011
Identities = 16/43 (37%), Positives = 27/43 (62%)
Frame = +2
Query: 548 AKAGDWPWHVAILIRQPKSVIGVYNCGGTIISRRAVLTAGHCL 676
A+ WPW V++ S+ +++CGG +IS + V+TA HC+
Sbjct: 483 ARPYSWPWQVSV------SMGKLHSCGGALISSKWVITAAHCV 519
>SB_17890| Best HMM Match : Trypsin (HMM E-Value=3.2)
Length = 157
Score = 37.5 bits (83), Expect = 0.011
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2
Query: 557 GDWPWHVAILIRQPKSVIGVYNCGGTIISRRAVLTAGHC 673
G WPW VA+L+ + C G++I R ++TAGHC
Sbjct: 63 GLWPWQVALLLNDRQV------CAGSLIEARWIITAGHC 95
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 37.1 bits (82), Expect = 0.014
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +2
Query: 545 EAKAGDWPWHVAILIRQPKSVIGVYN-CGGTIISRRAVLTAGHCL 676
+A G+WPW ++ + P +G CGG ++ V+TA HC+
Sbjct: 216 DAMHGEWPWQAMLMFQTP---LGYKQFCGGALVHEDWVVTASHCI 257
>SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23)
Length = 299
Score = 37.1 bits (82), Expect = 0.014
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = +2
Query: 545 EAKAGDWPWHVAILIRQPKSVIGVYNCGGTIISRRAVLTAGHCLFMNGS 691
EA WPW V+I ++ G + CGG+++S +LTA HC+ + +
Sbjct: 36 EAVPHSWPWQVSIRLK------GSHICGGSLLSPLWLLTAAHCVIRSNN 78
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 36.7 bits (81), Expect = 0.019
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 548 AKAGDWPWHVAILIRQPKSVIGVYNCGGTIISRRAVLTAGHCL 676
A G WPW V ++ + CGGT+++ V+TA HC+
Sbjct: 637 APPGAWPWQVMLIYNSGRQF-----CGGTLVTPEWVITAAHCV 674
>SB_17112| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 636
Score = 36.3 bits (80), Expect = 0.025
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +2
Query: 542 TEAKAGDWPWHVAILIRQPKSVIGVYNCGGTIISRRAVLTAGHCL 676
++A+ WPW V I ++CGGT++S + V+TA HC+
Sbjct: 356 SDAQPNSWPWMVQINYNNG------HHCGGTLVSPQWVVTAAHCV 394
>SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1864
Score = 36.3 bits (80), Expect = 0.025
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +2
Query: 506 KSLENTELTSVRTEAKAGD--WPWHVAILIRQPKSVIGVYNCGGTIISRRAVLTAGHC 673
K L++ L+++ D WPW VA+ + S V CGG +I+ VLTA HC
Sbjct: 1229 KRLKDVNLSALAACGVRSDDSWPWQVALTL----SGNPVQRCGGALIAADWVLTAAHC 1282
>SB_29414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 72
Score = 36.3 bits (80), Expect = 0.025
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 545 EAKAGDWPWHVAILIRQPKSVIGVYNCGGTIISRRAVLTAGHC 673
E+ G WPW A+ + + CGG++I + V+TA HC
Sbjct: 32 ESANGAWPWQAALFLNGTH-----HRCGGSVIKSQWVVTAAHC 69
>SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08)
Length = 235
Score = 36.3 bits (80), Expect = 0.025
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +2
Query: 545 EAKAGDWPWHVAILIRQPKSVIGVYNCGGTIISRRAVLTAGHCL 676
EA WPW +++ V G +NCG +++S LTA HC+
Sbjct: 91 EAVPNSWPWQLSL------RVYGSHNCGASLLSPGWALTAAHCV 128
>SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08)
Length = 386
Score = 36.3 bits (80), Expect = 0.025
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +2
Query: 542 TEAKAGDWPWHVAILIRQPKSVIGVYNCGGTIISRRAVLTAGHCL 676
T AK WPW Q ++ G CGG++I + +LTA HC+
Sbjct: 58 TAAKQNSWPWQA-----QLRTTSGFPYCGGSLIHPQWILTATHCV 97
>SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 35.9 bits (79), Expect = 0.033
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = +2
Query: 548 AKAGDWPWHVAILIRQPKSVIGVYNCGGTIISRRAVLTAGHCLFMN 685
A+ WPW +++ + G + CGG++I++ V+TA HC+ N
Sbjct: 38 AQQHSWPWQISLRVN------GRHICGGSLIAKDWVVTAAHCVDRN 77
>SB_30267| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 282
Score = 35.9 bits (79), Expect = 0.033
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +2
Query: 542 TEAKAGDWPWHVAILIRQPKSVIGVYNCGGTIISRRAVLTAGHCL 676
+EA G+WPW + ++ + CGG++++ VLTA HC+
Sbjct: 36 SEALLGEWPWQAWLHLQHTGFI-----CGGSLVAPGWVLTAAHCI 75
>SB_17803| Best HMM Match : SRCR (HMM E-Value=0)
Length = 1428
Score = 35.9 bits (79), Expect = 0.033
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = +2
Query: 542 TEAKAGDWPWHVAILIRQPKSVIGVYNCGGTIISRRAVLTAGHC 673
T + DWPW IL R+ C G +IS R V+TA HC
Sbjct: 1092 TPSPPEDWPWQTMILNRRRFPF-----CSGVLISARHVITAAHC 1130
>SB_10167| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 532
Score = 34.7 bits (76), Expect = 0.076
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +2
Query: 563 WPWHVAILIRQPKSVIGVYNCGGTIISRRAVLTAGHCL 676
WPW +++ + G + CGG++I+ VLTA HC+
Sbjct: 92 WPWQISLRVN------GRHICGGSLITPEWVLTAAHCV 123
>SB_53569| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 921
Score = 33.5 bits (73), Expect = 0.18
Identities = 18/63 (28%), Positives = 26/63 (41%)
Frame = +2
Query: 488 CSCMWPKSLENTELTSVRTEAKAGDWPWHVAILIRQPKSVIGVYNCGGTIISRRAVLTAG 667
C L N T A A WPW A+L + + C GT++ + ++T
Sbjct: 651 CGIALEADLANLAATPGWQPAHANSWPW-TALL--HFGGFLDIEGCMGTLVDQEWIMTTA 707
Query: 668 HCL 676
HCL
Sbjct: 708 HCL 710
>SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22)
Length = 231
Score = 33.5 bits (73), Expect = 0.18
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +2
Query: 563 WPWHVAILIRQPKSVIGVYNCGGTIISRRAVLTAGHCL 676
WPW +++ G + CGG++I+ VLTA HC+
Sbjct: 49 WPWQISLRTN------GQHICGGSLITPEWVLTAAHCV 80
>SB_1442| Best HMM Match : SRCR (HMM E-Value=0)
Length = 2103
Score = 33.5 bits (73), Expect = 0.18
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 557 GDWPWHVAILIRQPKSVIGVYNCGGTIISRRAVLTAGHCL 676
G WPW V I + + CGG+I++ + ++TA HC+
Sbjct: 1792 GAWPWQVQIGYKTMGHI-----CGGSIVNSQWIVTAAHCV 1826
>SB_43942| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 973
Score = 32.7 bits (71), Expect = 0.31
Identities = 28/105 (26%), Positives = 47/105 (44%), Gaps = 3/105 (2%)
Frame = +2
Query: 281 LASYNNSSDRPFTRTFHV*SEYTKFEWKRCT---RRNDVLHQQSDSL***NQGQTKNRLL 451
L S+ ++ F R F S TK W R +N VLH ++ + +L
Sbjct: 298 LVSHRATNAEMFERFFEKISGITKNTWSRRIDDLAKNAVLHLKNGE----TDAKPSQFIL 353
Query: 452 RHNKQI*WWKKICSCMWPKSLENTELTSVRTEAKAGDWPWHVAIL 586
+ ++I K+ + PK +ENT + + E AGDW H+ ++
Sbjct: 354 KEEREI---SKLAKAL-PK-MENTFILKEQMETHAGDWQAHLKLI 393
>SB_40955| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 383
Score = 31.9 bits (69), Expect = 0.53
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +2
Query: 536 VRTEAKAGDWPWHVAILIRQPKSVIGVYNCGGTIISRRAVLTAGHCL 676
+RT A +P+H + + C GT++S R VLTA HCL
Sbjct: 147 IRTYTYAERYPFHTVVKLST--------GCTGTLVSPRHVLTAAHCL 185
>SB_17195| Best HMM Match : Trypsin (HMM E-Value=4.9e-06)
Length = 379
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +2
Query: 623 CGGTIISRRAVLTAGHCL 676
C GT+ISR+ VLT+ HC+
Sbjct: 168 CSGTLISRQHVLTSAHCV 185
>SB_45112| Best HMM Match : YscO (HMM E-Value=3)
Length = 247
Score = 29.5 bits (63), Expect = 2.8
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Frame = -1
Query: 169 PLLLASQIPLHC---RNILYPNRKDYTLSELVRIRTWYSHFLLNTRKKRNINKY 17
P+LL +H RN+ ++++ L +L RIR Y NTRK++N+N++
Sbjct: 193 PMLLDLDAQVHKFMGRNMKEKSQRNQLLKKLKRIRNRYKD---NTRKRQNVNQH 243
>SB_17196| Best HMM Match : Trypsin (HMM E-Value=0.027)
Length = 379
Score = 29.1 bits (62), Expect = 3.8
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 623 CGGTIISRRAVLTAGHCL 676
C GT+IS R VLT+ HC+
Sbjct: 179 CTGTLISTRHVLTSAHCV 196
>SB_10327| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 865
Score = 29.1 bits (62), Expect = 3.8
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = +2
Query: 545 EAKAGDWPWHVAILIRQPKSVIGVYNCGGTIISRRAVLTAGHCLFMN 685
+A WPW ++ + G + CG ++++ LTA HCL ++
Sbjct: 246 DAVPHSWPWQLSFRYK------GSHICGASLLTPGWALTAAHCLTLS 286
>SB_58823| Best HMM Match : YscO (HMM E-Value=1.5)
Length = 246
Score = 29.1 bits (62), Expect = 3.8
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Frame = -1
Query: 169 PLLLASQIPLHC---RNILYPNRKDYTLSELVRIRTWYSHFLLNTRKKRNINKY 17
P+LL +H RN+ ++++ L +L RIR Y NTRK+RN++++
Sbjct: 192 PMLLDLDAQVHKFMGRNMKEKSQRNQLLKKLKRIRNRYKD---NTRKRRNVDQH 242
>SB_21520| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 800
Score = 29.1 bits (62), Expect = 3.8
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +2
Query: 611 GVYNCGGTIISRRAVLTAGHCL 676
G + CGG+++S VLTA HC+
Sbjct: 336 GHHICGGSLLSSTWVLTAAHCV 357
>SB_7558| Best HMM Match : TPR_MLP1_2 (HMM E-Value=2.2)
Length = 299
Score = 29.1 bits (62), Expect = 3.8
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Frame = -1
Query: 169 PLLLASQIPLHC---RNILYPNRKDYTLSELVRIRTWYSHFLLNTRKKRNINKY 17
P+LL +H N+ ++++ L +L RIR Y NTRK+RN+N++
Sbjct: 245 PMLLELDAQVHKFMGSNMREKSQRNQLLKKLKRIRNRYKD---NTRKRRNVNQH 295
>SB_2797| Best HMM Match : YscO (HMM E-Value=2.8)
Length = 246
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = -1
Query: 169 PLLLASQIPLH---CRNILYPNRKDYTLSELVRIRTWYSHFLLNTRKKRNINKY 17
P++L +H RN + +D L +L RIR Y N RK++N+N++
Sbjct: 192 PMILKLDAKVHKLMVRNTKEKSERDQLLKKLKRIRNRYKD---NNRKRQNVNQH 242
>SB_55505| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 292
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +2
Query: 566 PWHVAILIRQPKSVIGVYNCGGTIISRRAVLTAGHCLFMN 685
PW VA+++ ++ CGG+++ ++TA HC N
Sbjct: 53 PWMVAMMLDSAQA------CGGSLVPEDWIVTAAHCFDSN 86
>SB_45323| Best HMM Match : rve (HMM E-Value=5.3e-31)
Length = 577
Score = 27.9 bits (59), Expect = 8.7
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = +2
Query: 338 SEYTKFEWKRCTRRNDVLH 394
S++T E+++C R ND+LH
Sbjct: 322 SQFTSDEFQKCLRSNDILH 340
>SB_44747| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 27.9 bits (59), Expect = 8.7
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +2
Query: 542 TEAKAGDWPWHVAILIRQPKSVIGVYNCGGTIISRRAVLTAGHCLFMNGS 691
T A+ +PWH I P+ C G ++S R V+TA CL + S
Sbjct: 34 TVAERASFPWHAYI----PE-----LQCSGALVSPRWVVTAASCLKQSSS 74
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,011,178
Number of Sequences: 59808
Number of extensions: 459067
Number of successful extensions: 1100
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 973
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1069
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1901817086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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