Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20783
         (718 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like p...    40   0.002
AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like...    36   0.022
AF078157-9|AAG24075.3|  425|Caenorhabditis elegans Hypothetical ...    33   0.27 
U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like p...    31   1.1  
Z92832-5|CAB07374.2|  292|Caenorhabditis elegans Hypothetical pr...    30   1.4  
Z78013-9|CAB01420.2|  297|Caenorhabditis elegans Hypothetical pr...    29   2.5  
AF003134-1|AAB54144.1|  522|Caenorhabditis elegans Trypsin-like ...    29   2.5  
U97408-1|AAB93344.2|  360|Caenorhabditis elegans Trypsin-like pr...    29   4.4  
AF078785-8|AAC27095.1|  658|Caenorhabditis elegans Hypothetical ...    29   4.4  
Z81486-6|CAB03988.2|  309|Caenorhabditis elegans Hypothetical pr...    28   5.8  
AF016433-3|AAB65390.1|  336|Caenorhabditis elegans Seven tm rece...    28   5.8  
X56212-1|CAA39669.1| 1613|Caenorhabditis elegans vitellogenin pr...    28   7.7  

>U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like
           protease protein 1 protein.
          Length = 293

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 18/44 (40%), Positives = 25/44 (56%)
 Frame = +2

Query: 542 TEAKAGDWPWHVAILIRQPKSVIGVYNCGGTIISRRAVLTAGHC 673
           +E+    WPW V +L R     +G + CGG++I    VLTA HC
Sbjct: 62  SESSPHSWPWTVQLLSR-----LGHHRCGGSLIDPNFVLTAAHC 100


>AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like
           protease protein 5 protein.
          Length = 331

 Score = 36.3 bits (80), Expect = 0.022
 Identities = 17/36 (47%), Positives = 22/36 (61%)
 Frame = +2

Query: 566 PWHVAILIRQPKSVIGVYNCGGTIISRRAVLTAGHC 673
           PW V I ++  K    V  CGGT+I+ + VLTA HC
Sbjct: 44  PWAVQIRVKARKGDFEVI-CGGTLITLKHVLTAAHC 78


>AF078157-9|AAG24075.3|  425|Caenorhabditis elegans Hypothetical
           protein F25E5.4 protein.
          Length = 425

 Score = 32.7 bits (71), Expect = 0.27
 Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
 Frame = +2

Query: 548 AKAGDWPWHVAILIR-QPKSVIGVYNCGGTIISRRAVLTAGHCLFMNG 688
           A+ GD PW V++ ++    S  GV+   GT+IS R VLT      ++G
Sbjct: 47  ARPGDHPWAVSVYVKANTTSKNGVFLGPGTLISARHVLTFNSIKVVDG 94


>U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like
           protease protein 2 protein.
          Length = 265

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 13/43 (30%), Positives = 24/43 (55%)
 Frame = +2

Query: 545 EAKAGDWPWHVAILIRQPKSVIGVYNCGGTIISRRAVLTAGHC 673
           E   G +PW  A+  +  K+    ++CG +I+ +  ++TA HC
Sbjct: 32  ETVPGAFPWTAALRNKATKA----HHCGASILDKTHLITAAHC 70


>Z92832-5|CAB07374.2|  292|Caenorhabditis elegans Hypothetical
           protein F31D4.6 protein.
          Length = 292

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 17/49 (34%), Positives = 27/49 (55%)
 Frame = +2

Query: 524 ELTSVRTEAKAGDWPWHVAILIRQPKSVIGVYNCGGTIISRRAVLTAGH 670
           E   ++ E+K  ++PW V+       +V GV   GG+IIS   ++TA H
Sbjct: 15  ESCGIQQESKIKNFPWAVSF------TVDGVNRLGGSIISPYHIITAAH 57


>Z78013-9|CAB01420.2|  297|Caenorhabditis elegans Hypothetical
           protein F15B9.5 protein.
          Length = 297

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +2

Query: 578 AILIRQPKSVIGVYNCGGTIISRRAVLTAGHCLF 679
           +++ R P     V  CGG +I+   V+T+ HC+F
Sbjct: 33  SVITRFPDGTTNV--CGGVLIAPSIVITSAHCVF 64


>AF003134-1|AAB54144.1|  522|Caenorhabditis elegans Trypsin-like
           protease protein 7 protein.
          Length = 522

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = +2

Query: 545 EAKAGDWPWHVAILIRQPKSVIGVYNCGGTIISRRAVLTAGHC 673
           +A   + PW V   +   K       C GTI+S R +L A HC
Sbjct: 168 DASQSEAPWSVFTYLYS-KDEQSATTCTGTIVSPRHILIATHC 209


>U97408-1|AAB93344.2|  360|Caenorhabditis elegans Trypsin-like
           protease protein 6 protein.
          Length = 360

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
 Frame = +2

Query: 545 EAKAGDWPWHVAI-LIRQPKSVIGVYN--CGGTIISRRAVLTAGHC 673
           +A+  + PW V I      K++   ++  C GT+ S R +LTA HC
Sbjct: 46  KAEIDEAPWAVRINTYTNVKNIDETWSKHCSGTLTSPRHILTATHC 91


>AF078785-8|AAC27095.1|  658|Caenorhabditis elegans Hypothetical
           protein C04E12.10 protein.
          Length = 658

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = -3

Query: 431 GLDFIITKNHFVDGEH 384
           GL F++ +NHFV GEH
Sbjct: 142 GLQFVVGQNHFVMGEH 157


>Z81486-6|CAB03988.2|  309|Caenorhabditis elegans Hypothetical
           protein C53A5.8 protein.
          Length = 309

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -1

Query: 283 QLFLTTTKVVFVMPYLFLFPFRNKLPFQLF 194
           Q+F  T  VVF++  LFLF F  K  +  +
Sbjct: 24  QMFYGTITVVFMLILLFLFQFSKKFSYSFY 53


>AF016433-3|AAB65390.1|  336|Caenorhabditis elegans Seven tm
           receptor protein 144 protein.
          Length = 336

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 4/49 (8%)
 Frame = +1

Query: 115 LGIIYFDNVKGFD-WRAVVDFGLYNNLEKVEM--EVYFEK-EIKINKAS 249
           LG+I+   +  F  W A V FG++N +EK +   +V FE  E+ I++ S
Sbjct: 132 LGLIFIPCIVCFVLWFACVYFGMHNTIEKQQFMRDVMFENYEVDISRES 180


>X56212-1|CAA39669.1| 1613|Caenorhabditis elegans vitellogenin
            protein.
          Length = 1613

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -3

Query: 395  DGEHRYDGYIVSTRISYIQIKRE 327
            +GE R+DGY + T+I Y   K +
Sbjct: 1413 EGEVRFDGYTIKTKIPYYSRKNQ 1435


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,478,109
Number of Sequences: 27780
Number of extensions: 349059
Number of successful extensions: 997
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 944
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 996
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)