Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20783
         (718 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    33   0.002
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          26   0.31 
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    25   0.71 
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    23   2.2  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           22   6.7  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    22   6.7  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 33.5 bits (73), Expect = 0.002
 Identities = 13/18 (72%), Positives = 15/18 (83%)
 Frame = +2

Query: 623 CGGTIISRRAVLTAGHCL 676
           CG TIIS+R VLTA HC+
Sbjct: 188 CGATIISKRYVLTAAHCI 205


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 26.2 bits (55), Expect = 0.31
 Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = +1

Query: 148 FDWRAVVDFGLYNNLEKVEMEVYFEKEIKINKA-SQKQPSL 267
           +D++ +V F L +    +   VY E+  K+N A  +K+P L
Sbjct: 72  WDYKGIVYFELLSPNRTINSVVYIEQLTKLNNAVEEKRPEL 112


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 25.0 bits (52), Expect = 0.71
 Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = +1

Query: 148 FDWRAVVDFGLYNNLEKVEMEVYFEKEIKINKA-SQKQPSL 267
           +D++ +V F L      +   VY E+  K+N A  +K+P L
Sbjct: 194 WDYKGIVYFELLPPNRTINSVVYIEQLTKLNNAVEEKRPEL 234


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +1

Query: 625 WWNHHFKESSFDSRSL 672
           WWN      SFD +SL
Sbjct: 367 WWNMKISNLSFDKQSL 382


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -1

Query: 367 SFPLEFRIFRSNVKRSCK 314
           S  + +RIF++NVK + K
Sbjct: 514 SSKINYRIFKANVKEAVK 531


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 277 FLTTTKVVFVMPYLFLFP 224
           F TT  V    P+LFL+P
Sbjct: 358 FQTTPTVSVEQPHLFLYP 375


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,832
Number of Sequences: 438
Number of extensions: 4893
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22170330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)