Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20781
         (522 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    29   0.095
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    24   3.6  
EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton anti...    23   8.2  

>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 29.1 bits (62), Expect = 0.095
 Identities = 21/94 (22%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
 Frame = -1

Query: 447 LIPVKNSFLFSTVNEI*LGYFWHN*-KYCFKNLVAKYLFEWYIKFSV-VIVCRFTMFSNI 274
           + P  N+ +++TV  I   Y  +   K+  K  +  +   + I  +V V V    +F  +
Sbjct: 24  IFPTSNAIIWTTVTHILCAYLCYIFSKFACKIQIQSFSMAFPINLAVPVTVTLLLVFCGL 83

Query: 273 K*FFT---EEILINFYFLNNQILYYLYNFIVNPY 181
           +       + IL ++ F     +YYL++++VN +
Sbjct: 84  READVCAFDNILPDYIFFRMPPIYYLFDYVVNEF 117


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 15/50 (30%), Positives = 25/50 (50%)
 Frame = +2

Query: 326  YHSNKYFATKFLKQYF*LCQKYPS*ISFTVLNKNEFLTGISNPNEEYFSE 475
            Y S+ Y+  K+ KQY  L + Y S  +     +N++     N N+E F +
Sbjct: 964  YKSSDYYY-KYYKQYPHLFKDYFSQYNKNHKYQNDYYEQFGNKNQEEFQK 1012


>EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton
           antiporter protein.
          Length = 647

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 7/25 (28%), Positives = 15/25 (60%)
 Frame = -1

Query: 372 KYCFKNLVAKYLFEWYIKFSVVIVC 298
           K  +K ++   L  W+++ S++ VC
Sbjct: 256 KKIYKTILKLGLIPWFVECSLIAVC 280


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 444,310
Number of Sequences: 2352
Number of extensions: 8098
Number of successful extensions: 16
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)