Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20779
         (676 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0PGI9 Cluster: Farnesoic acid O-methyltransferase; n=2...    37   0.39 
UniRef50_A6TV56 Cluster: Replication initiator A domain protein;...    35   1.6  
UniRef50_Q89US4 Cluster: Bll1337 protein; n=1; Bradyrhizobium ja...    35   2.1  
UniRef50_A6L7A6 Cluster: Glycosyltransferase family 2; n=1; Bact...    34   3.6  
UniRef50_A0M155 Cluster: Class-I/II aminotransferase; n=1; Grame...    33   6.3  
UniRef50_Q6BIK7 Cluster: Similarities with CA1969|IPF18579.3f Ca...    33   6.3  

>UniRef50_A0PGI9 Cluster: Farnesoic acid O-methyltransferase; n=24;
           Decapoda|Rep: Farnesoic acid O-methyltransferase -
           Penaeus monodon (Penoeid shrimp)
          Length = 280

 Score = 37.1 bits (82), Expect = 0.39
 Identities = 15/40 (37%), Positives = 25/40 (62%)
 Frame = +2

Query: 359 TPNIISNSEYRQFSISWSKNGVCLGQNGELEPIMKLECKE 478
           TP+I+S  EYR+F +++  + + +G+ GE EP M     E
Sbjct: 78  TPDILSEEEYREFWVAFDHDVIRVGKGGEWEPFMSATIPE 117


>UniRef50_A6TV56 Cluster: Replication initiator A domain protein;
           n=1; Alkaliphilus metalliredigens QYMF|Rep: Replication
           initiator A domain protein - Alkaliphilus
           metalliredigens QYMF
          Length = 319

 Score = 35.1 bits (77), Expect = 1.6
 Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
 Frame = +2

Query: 356 HTPNIISN--SEYRQFSISWSKNGVCLGQNGELEPIMKLECKEQNFNYFTFSMTEV*HLH 529
           HT   + N   E  +     SKN        EL+ + KL+C   N N+  FS T++ H+ 
Sbjct: 139 HTSGSMKNRIQEVHKIEFKESKNHTSRSMKTELQEVPKLDCNNTNLNHTDFSDTDLNHIQ 198

Query: 530 T 532
           +
Sbjct: 199 S 199


>UniRef50_Q89US4 Cluster: Bll1337 protein; n=1; Bradyrhizobium
           japonicum|Rep: Bll1337 protein - Bradyrhizobium
           japonicum
          Length = 915

 Score = 34.7 bits (76), Expect = 2.1
 Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
 Frame = +2

Query: 260 GLAKEAGMKCDYWVVLGDRSF---IHAPNSGIQFAHTPNIISNSEYRQFSISWSKNGVCL 430
           GLA E G K   WV + D  F   I +  +G   + TP+ ++    RQF  +W +  V +
Sbjct: 687 GLAVEKGRKYRVWVEIEDPWFDRTIMSGTNGFMTSFTPHYLALPTLRQFGAAWFQPVVRI 746

Query: 431 GQNG 442
           G  G
Sbjct: 747 GTKG 750


>UniRef50_A6L7A6 Cluster: Glycosyltransferase family 2; n=1;
           Bacteroides vulgatus ATCC 8482|Rep: Glycosyltransferase
           family 2 - Bacteroides vulgatus (strain ATCC 8482 / DSM
           1447 / NCTC 11154)
          Length = 271

 Score = 33.9 bits (74), Expect = 3.6
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = +2

Query: 254 SVGLAKEAGMKCDYWVVLGDRSFIHAPNSGIQFAH 358
           S+ + KE   K DYWV   D+   HA N G+  AH
Sbjct: 47  SIEVIKEYAGKVDYWVSEPDKGIYHAMNKGVLQAH 81


>UniRef50_A0M155 Cluster: Class-I/II aminotransferase; n=1; Gramella
           forsetii KT0803|Rep: Class-I/II aminotransferase -
           Gramella forsetii (strain KT0803)
          Length = 802

 Score = 33.1 bits (72), Expect = 6.3
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = -1

Query: 562 LFGAVVIQTSSVQVLYFCHRKCEIIKILFFALQFH 458
           LF AV ++ + V++   CH + E IK L  A++FH
Sbjct: 364 LFPAVPVKNTGVRITISCHNELEDIKALVDAMEFH 398


>UniRef50_Q6BIK7 Cluster: Similarities with CA1969|IPF18579.3f
           Candida albicans IPF18579.3f unknown function; n=1;
           Debaryomyces hansenii|Rep: Similarities with
           CA1969|IPF18579.3f Candida albicans IPF18579.3f unknown
           function - Debaryomyces hansenii (Yeast) (Torulaspora
           hansenii)
          Length = 1001

 Score = 33.1 bits (72), Expect = 6.3
 Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 8/88 (9%)
 Frame = +2

Query: 332 PNSGIQFAHTPNIISNSEYRQFS---ISWSKNGVCLGQ--NGELEPIMKLECKEQNFN-- 490
           PNS + +    N ++NS    F+   +  SK    + Q  N +L  +++   K  N N  
Sbjct: 411 PNSSVSY--NSNRLANSRKNSFTFGKVDVSKQNENINQPRNSKLSMLIQSRYKSSNINPL 468

Query: 491 -YFTFSMTEV*HLHTGGLNYHRPK*NVP 571
            Y+TF+ + +  +H   LN + P  N P
Sbjct: 469 NYYTFASSYIDSIHKASLNIYVPPSNSP 496


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 687,841,007
Number of Sequences: 1657284
Number of extensions: 13843588
Number of successful extensions: 25184
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 24593
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25182
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52066120554
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)