Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20775
         (655 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    23   1.7  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    23   1.7  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   3.8  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    22   3.8  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    21   6.7  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   6.7  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   8.9  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   8.9  

>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 14/51 (27%), Positives = 24/51 (47%)
 Frame = +1

Query: 271 VYIVCYAIGLSTVPYVTIGEMFPTNVKLYASCIAHIYTGVAMFAVQNLFRV 423
           VY +C  IGL+T+     GE+       +    +   T   + +V +LFR+
Sbjct: 28  VYAICKLIGLNTLRIGRKGELKQHKSDYF--YFSFYITSYTLLSVYSLFRI 76


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 14/51 (27%), Positives = 24/51 (47%)
 Frame = +1

Query: 271 VYIVCYAIGLSTVPYVTIGEMFPTNVKLYASCIAHIYTGVAMFAVQNLFRV 423
           VY +C  IGL+T+     GE+       +    +   T   + +V +LFR+
Sbjct: 28  VYAICKLIGLNTLRIGRKGELKQHKSDYF--YFSFYITSYTLLSVYSLFRI 76


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -2

Query: 450 CVNFISLFDNPEEILHCKHSDA 385
           C+N +S+F     IL+C ++ A
Sbjct: 320 CLNILSIFTYVPMILYCVYTTA 341


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -2

Query: 450 CVNFISLFDNPEEILHCKHSDA 385
           C+N +S+F     IL+C ++ A
Sbjct: 45  CLNILSIFTYVPMILYCVYTTA 66


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = +2

Query: 5   TILPNGTLEEKTRKSIEPYQESII 76
           ++ P G  E+K  KS+  +  ++I
Sbjct: 226 SLTPQGRKEQKVLKSLHSFSNNVI 249


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = +2

Query: 5   TILPNGTLEEKTRKSIEPYQESII 76
           ++ P G  E+K  KS+  +  ++I
Sbjct: 226 SLTPQGRKEQKVLKSLHSFSNNVI 249


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -2

Query: 615 FWLVFDRVNFLC 580
           FW V  +V FLC
Sbjct: 139 FWFVLKQVMFLC 150


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -2

Query: 108 KIQVATCTHPIM 73
           KIQ ATC H I+
Sbjct: 171 KIQFATCAHLIL 182


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,445
Number of Sequences: 336
Number of extensions: 3419
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)