Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20773
(657 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80226-1|AAB38510.1| 500|Homo sapiens gamma-aminobutyric acid t... 97 5e-20
S75578-1|AAD14176.1| 450|Homo sapiens 4-aminobutyrate aminotran... 97 5e-20
BC015628-1|AAH15628.1| 500|Homo sapiens 4-aminobutyrate aminotr... 97 5e-20
BC031413-1|AAH31413.1| 500|Homo sapiens 4-aminobutyrate aminotr... 95 1e-19
L32961-1|AAA74449.1| 500|Homo sapiens 4-aminobutyrate aminotran... 92 1e-18
AK223128-1|BAD96848.1| 502|Homo sapiens alanine-glyoxylate amin... 36 0.13
AB193309-1|BAD66662.1| 514|Homo sapiens beta-alanine-pyruvate a... 36 0.13
AK223375-1|BAD97095.1| 514|Homo sapiens alanine-glyoxylate amin... 34 0.51
AJ292204-1|CAC24841.1| 514|Homo sapiens alanine-glyoxylate amin... 34 0.51
L14837-1|AAA02891.1| 1736|Homo sapiens tight junction (zonula oc... 32 2.1
DQ015919-1|AAY22179.1| 1748|Homo sapiens tight junction protein ... 32 2.1
BC111712-1|AAI11713.1| 1748|Homo sapiens tight junction protein ... 32 2.1
>U80226-1|AAB38510.1| 500|Homo sapiens gamma-aminobutyric acid
transaminase protein.
Length = 500
Score = 97.1 bits (231), Expect = 5e-20
Identities = 40/80 (50%), Positives = 57/80 (71%)
Frame = +1
Query: 259 DKPNIQTAIPGPKSQQLLKELNTLQQAGAVQLFADYDKSIGNYFFDADGNAFLDAFTQIS 438
D P ++T +PGP+SQ+L+K+LN +Q A AV F +Y++S GNY D DGN LD ++QIS
Sbjct: 42 DGPLMKTEVPGPRSQELMKQLNIIQNAEAVHFFCNYEESRGNYLVDVDGNRMLDLYSQIS 101
Query: 439 SLPVGYNHPELLSAFEDQHN 498
S+P+GY+HP LL + N
Sbjct: 102 SVPIGYSHPALLKLIQQPQN 121
Score = 41.1 bits (92), Expect = 0.003
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = +3
Query: 510 INRPALGVFPSADWPEKLKNVLLSVGPVGLDNIAPMMCGXCSIENAYKT 656
+NRPALG+ P ++ EKL+ LLSV P G + +P ++ KT
Sbjct: 126 VNRPALGILPPENFVEKLRQSLLSVAPKGCPSSSPWPACPAPMKTTLKT 174
>S75578-1|AAD14176.1| 450|Homo sapiens 4-aminobutyrate
aminotransferase protein.
Length = 450
Score = 97.1 bits (231), Expect = 5e-20
Identities = 40/80 (50%), Positives = 57/80 (71%)
Frame = +1
Query: 259 DKPNIQTAIPGPKSQQLLKELNTLQQAGAVQLFADYDKSIGNYFFDADGNAFLDAFTQIS 438
D P ++T +PGP+SQ+L+K+LN +Q A AV F +Y++S GNY D DGN LD ++QIS
Sbjct: 7 DGPLMKTEVPGPRSQELMKQLNIIQNAEAVHFFCNYEESRGNYLVDVDGNRMLDLYSQIS 66
Query: 439 SLPVGYNHPELLSAFEDQHN 498
S+P+GY+HP LL + N
Sbjct: 67 SVPIGYSHPALLKLIQQPQN 86
Score = 59.7 bits (138), Expect = 9e-09
Identities = 26/49 (53%), Positives = 33/49 (67%)
Frame = +3
Query: 510 INRPALGVFPSADWPEKLKNVLLSVGPVGLDNIAPMMCGXCSIENAYKT 656
+NRPALG+ P ++ EKL+ LLSV P G+ + M CG CS ENA KT
Sbjct: 91 VNRPALGILPPENFVEKLRQSLLSVAPKGMSQLITMACGSCSNENALKT 139
>BC015628-1|AAH15628.1| 500|Homo sapiens 4-aminobutyrate
aminotransferase protein.
Length = 500
Score = 97.1 bits (231), Expect = 5e-20
Identities = 40/80 (50%), Positives = 57/80 (71%)
Frame = +1
Query: 259 DKPNIQTAIPGPKSQQLLKELNTLQQAGAVQLFADYDKSIGNYFFDADGNAFLDAFTQIS 438
D P ++T +PGP+SQ+L+K+LN +Q A AV F +Y++S GNY D DGN LD ++QIS
Sbjct: 42 DGPLMKTEVPGPRSQELMKQLNIIQNAEAVHFFCNYEESRGNYLVDVDGNRMLDLYSQIS 101
Query: 439 SLPVGYNHPELLSAFEDQHN 498
S+P+GY+HP LL + N
Sbjct: 102 SVPIGYSHPALLKLIQQPQN 121
Score = 59.7 bits (138), Expect = 9e-09
Identities = 26/49 (53%), Positives = 33/49 (67%)
Frame = +3
Query: 510 INRPALGVFPSADWPEKLKNVLLSVGPVGLDNIAPMMCGXCSIENAYKT 656
+NRPALG+ P ++ EKL+ LLSV P G+ + M CG CS ENA KT
Sbjct: 126 VNRPALGILPPENFVEKLRQSLLSVAPKGMSQLITMACGSCSNENALKT 174
>BC031413-1|AAH31413.1| 500|Homo sapiens 4-aminobutyrate
aminotransferase protein.
Length = 500
Score = 95.5 bits (227), Expect = 1e-19
Identities = 39/80 (48%), Positives = 57/80 (71%)
Frame = +1
Query: 259 DKPNIQTAIPGPKSQQLLKELNTLQQAGAVQLFADYDKSIGNYFFDADGNAFLDAFTQIS 438
D P ++T +PGP+S++L+K+LN +Q A AV F +Y++S GNY D DGN LD ++QIS
Sbjct: 42 DGPLMKTEVPGPRSRELMKQLNIIQNAEAVHFFCNYEESRGNYLVDVDGNRMLDLYSQIS 101
Query: 439 SLPVGYNHPELLSAFEDQHN 498
S+P+GY+HP LL + N
Sbjct: 102 SVPIGYSHPALLKLIQQPQN 121
Score = 59.7 bits (138), Expect = 9e-09
Identities = 26/49 (53%), Positives = 33/49 (67%)
Frame = +3
Query: 510 INRPALGVFPSADWPEKLKNVLLSVGPVGLDNIAPMMCGXCSIENAYKT 656
+NRPALG+ P ++ EKL+ LLSV P G+ + M CG CS ENA KT
Sbjct: 126 VNRPALGILPPENFVEKLRQSLLSVAPKGMSQLITMACGSCSNENALKT 174
>L32961-1|AAA74449.1| 500|Homo sapiens 4-aminobutyrate
aminotransferase protein.
Length = 500
Score = 92.3 bits (219), Expect = 1e-18
Identities = 38/80 (47%), Positives = 56/80 (70%)
Frame = +1
Query: 259 DKPNIQTAIPGPKSQQLLKELNTLQQAGAVQLFADYDKSIGNYFFDADGNAFLDAFTQIS 438
D P ++T +PGP+SQ+L+K+LN +Q A AV F +Y++S GNY D DGN LD ++QIS
Sbjct: 42 DGPLMKTEVPGPRSQELMKQLNIIQNAEAVHFFCNYEESRGNYLVDVDGNRMLDLYSQIS 101
Query: 439 SLPVGYNHPELLSAFEDQHN 498
S+P+GY+ P L+ + N
Sbjct: 102 SVPIGYSDPALVKLIQQPQN 121
Score = 56.4 bits (130), Expect = 8e-08
Identities = 25/49 (51%), Positives = 32/49 (65%)
Frame = +3
Query: 510 INRPALGVFPSADWPEKLKNVLLSVGPVGLDNIAPMMCGXCSIENAYKT 656
+NRPAL + P ++ EKL+ LLSV P G+ + M CG CS ENA KT
Sbjct: 126 VNRPALEILPPENFVEKLRQSLLSVAPKGMSQLITMACGSCSNENALKT 174
>AK223128-1|BAD96848.1| 502|Homo sapiens alanine-glyoxylate
aminotransferase 2 precursor variant protein.
Length = 502
Score = 35.9 bits (79), Expect = 0.13
Identities = 17/48 (35%), Positives = 30/48 (62%)
Frame = +1
Query: 385 YFFDADGNAFLDAFTQISSLPVGYNHPELLSAFEDQHNLKS*LIGQLW 528
+ FDA+GN +LD F+ I ++ VG+ HP++ + + Q +G+LW
Sbjct: 83 WLFDAEGNRYLDFFSGIVTVSVGHCHPKVNAVAQKQ-------LGRLW 123
>AB193309-1|BAD66662.1| 514|Homo sapiens beta-alanine-pyruvate
aminotransferase protein.
Length = 514
Score = 35.9 bits (79), Expect = 0.13
Identities = 17/48 (35%), Positives = 30/48 (62%)
Frame = +1
Query: 385 YFFDADGNAFLDAFTQISSLPVGYNHPELLSAFEDQHNLKS*LIGQLW 528
+ FDA+GN +LD F+ I ++ VG+ HP++ + + Q +G+LW
Sbjct: 95 WLFDAEGNRYLDFFSGIVTVSVGHCHPKVNAVAQKQ-------LGRLW 135
>AK223375-1|BAD97095.1| 514|Homo sapiens alanine-glyoxylate
aminotransferase 2 precursor variant protein.
Length = 514
Score = 33.9 bits (74), Expect = 0.51
Identities = 16/48 (33%), Positives = 30/48 (62%)
Frame = +1
Query: 385 YFFDADGNAFLDAFTQISSLPVGYNHPELLSAFEDQHNLKS*LIGQLW 528
+ FDA+G+ +LD F+ I ++ VG+ HP++ + + Q +G+LW
Sbjct: 95 WLFDAEGSRYLDFFSGIVTVSVGHCHPKVNAVAQKQ-------LGRLW 135
>AJ292204-1|CAC24841.1| 514|Homo sapiens alanine-glyoxylate
aminotransferase 2 protein.
Length = 514
Score = 33.9 bits (74), Expect = 0.51
Identities = 16/48 (33%), Positives = 30/48 (62%)
Frame = +1
Query: 385 YFFDADGNAFLDAFTQISSLPVGYNHPELLSAFEDQHNLKS*LIGQLW 528
+ FDA+G+ +LD F+ I ++ VG+ HP++ + + Q +G+LW
Sbjct: 95 WLFDAEGSRYLDFFSGIVTVSVGHCHPKVNAVAQKQ-------LGRLW 135
>L14837-1|AAA02891.1| 1736|Homo sapiens tight junction (zonula
occludens) protein ZO-1 protein.
Length = 1736
Score = 31.9 bits (69), Expect = 2.1
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = -3
Query: 640 SIEQXP--HIIGAMLSNPTGPTDNNTFFNFSGQSAEGKTPRA 521
S E P HI + LS P P + NFS S++GK P A
Sbjct: 1354 SFENKPPAHIAASHLSEPAKPAHSQNQSNFSSYSSKGKPPEA 1395
>DQ015919-1|AAY22179.1| 1748|Homo sapiens tight junction protein 1
(zona occludens 1) protein.
Length = 1748
Score = 31.9 bits (69), Expect = 2.1
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = -3
Query: 640 SIEQXP--HIIGAMLSNPTGPTDNNTFFNFSGQSAEGKTPRA 521
S E P HI + LS P P + NFS S++GK P A
Sbjct: 1366 SFENKPPAHIAASHLSEPAKPAHSQNQSNFSSYSSKGKPPEA 1407
>BC111712-1|AAI11713.1| 1748|Homo sapiens tight junction protein 1
(zona occludens 1) protein.
Length = 1748
Score = 31.9 bits (69), Expect = 2.1
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = -3
Query: 640 SIEQXP--HIIGAMLSNPTGPTDNNTFFNFSGQSAEGKTPRA 521
S E P HI + LS P P + NFS S++GK P A
Sbjct: 1366 SFENKPPAHIAASHLSEPAKPAHSQNQSNFSSYSSKGKPPEA 1407
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,942,855
Number of Sequences: 237096
Number of extensions: 1693429
Number of successful extensions: 3038
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2770
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3038
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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