Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20334
         (499 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   6.2  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    21   8.1  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   8.1  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    21   8.1  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   8.1  

>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -3

Query: 452 FHLQKRWPPVAYINENKALAYTCIHY*KEMW 360
           F  + R PPV    E++ALA    H  ++ W
Sbjct: 214 FDTEGRLPPVWQGGESEALARLERHLERKAW 244


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -3

Query: 302 FYFEYTVQYIAYYACVIRLFVQLLMLRV 219
           F  EY  +YI  Y+  I  F+    L++
Sbjct: 129 FVKEYAFEYIQLYSQFILYFLLFATLKI 156


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 12/46 (26%), Positives = 20/46 (43%)
 Frame = -3

Query: 407 NKALAYTCIHY*KEMWPNRITLKFADCTDTTYDNFFYFEYTVQYIA 270
           N  L Y C  + + + PN   L  A  +   + +   F Y  +Y+A
Sbjct: 102 NHQLVYNCHTFGRFLAPNLTYLLVALYSGYVWTDILGFGYFREYLA 147


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -3

Query: 302 FYFEYTVQYIAYYACVIRLFVQLLMLRV 219
           F  EY  +YI  Y+  I  F+    L++
Sbjct: 129 FVKEYAFEYIQLYSQFILYFLLFATLKI 156


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -3

Query: 302 FYFEYTVQYIAYYACVIRLFVQLLMLRV 219
           F  EY  +YI  Y+  I  F+    L++
Sbjct: 449 FVKEYAFEYIQLYSQFILYFLLFATLKI 476


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,159
Number of Sequences: 336
Number of extensions: 1474
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11735024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)