Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20334
         (499 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y08969-1|CAA70166.1|  217|Drosophila melanogaster Nascent polype...    54   8e-08
AY075332-1|AAL68199.1|  217|Drosophila melanogaster GH11940p pro...    54   8e-08
AF017783-1|AAB97513.1|  217|Drosophila melanogaster alpha NAC pr...    54   8e-08
AE013599-1584|AAM68654.1|  217|Drosophila melanogaster CG8759-PC...    54   8e-08
AE013599-1583|AAF58457.1|  217|Drosophila melanogaster CG8759-PB...    54   8e-08
AE013599-1582|AAM68653.1|  217|Drosophila melanogaster CG8759-PA...    54   8e-08
BT012499-1|AAS93770.1|  347|Drosophila melanogaster GH09281p pro...    39   0.004
AY089219-1|AAL89957.1|  340|Drosophila melanogaster AT01837p pro...    39   0.004
AE014134-190|AAF51428.2|  347|Drosophila melanogaster CG4415-PA ...    39   0.004

>Y08969-1|CAA70166.1|  217|Drosophila melanogaster Nascent
           polypeptide associatedcomplex protein alpha subunit
           protein.
          Length = 217

 Score = 54.4 bits (125), Expect = 8e-08
 Identities = 24/33 (72%), Positives = 31/33 (93%)
 Frame = +3

Query: 69  IVMSQANVSRAKAVRALKNNQSDIVNAIMELTM 167
           +V++QAN +RAKA++ALKNN +DIVNAIMELTM
Sbjct: 184 LVITQANTTRAKAIKALKNNDNDIVNAIMELTM 216


>AY075332-1|AAL68199.1|  217|Drosophila melanogaster GH11940p
           protein.
          Length = 217

 Score = 54.4 bits (125), Expect = 8e-08
 Identities = 24/33 (72%), Positives = 31/33 (93%)
 Frame = +3

Query: 69  IVMSQANVSRAKAVRALKNNQSDIVNAIMELTM 167
           +V++QAN +RAKA++ALKNN +DIVNAIMELTM
Sbjct: 184 LVITQANTTRAKAIKALKNNNNDIVNAIMELTM 216


>AF017783-1|AAB97513.1|  217|Drosophila melanogaster alpha NAC
           protein.
          Length = 217

 Score = 54.4 bits (125), Expect = 8e-08
 Identities = 24/33 (72%), Positives = 31/33 (93%)
 Frame = +3

Query: 69  IVMSQANVSRAKAVRALKNNQSDIVNAIMELTM 167
           +V++QAN +RAKA++ALKNN +DIVNAIMELTM
Sbjct: 184 LVITQANTTRAKAIKALKNNNNDIVNAIMELTM 216


>AE013599-1584|AAM68654.1|  217|Drosophila melanogaster CG8759-PC,
           isoform C protein.
          Length = 217

 Score = 54.4 bits (125), Expect = 8e-08
 Identities = 24/33 (72%), Positives = 31/33 (93%)
 Frame = +3

Query: 69  IVMSQANVSRAKAVRALKNNQSDIVNAIMELTM 167
           +V++QAN +RAKA++ALKNN +DIVNAIMELTM
Sbjct: 184 LVITQANTTRAKAIKALKNNNNDIVNAIMELTM 216


>AE013599-1583|AAF58457.1|  217|Drosophila melanogaster CG8759-PB,
           isoform B protein.
          Length = 217

 Score = 54.4 bits (125), Expect = 8e-08
 Identities = 24/33 (72%), Positives = 31/33 (93%)
 Frame = +3

Query: 69  IVMSQANVSRAKAVRALKNNQSDIVNAIMELTM 167
           +V++QAN +RAKA++ALKNN +DIVNAIMELTM
Sbjct: 184 LVITQANTTRAKAIKALKNNNNDIVNAIMELTM 216


>AE013599-1582|AAM68653.1|  217|Drosophila melanogaster CG8759-PA,
           isoform A protein.
          Length = 217

 Score = 54.4 bits (125), Expect = 8e-08
 Identities = 24/33 (72%), Positives = 31/33 (93%)
 Frame = +3

Query: 69  IVMSQANVSRAKAVRALKNNQSDIVNAIMELTM 167
           +V++QAN +RAKA++ALKNN +DIVNAIMELTM
Sbjct: 184 LVITQANTTRAKAIKALKNNNNDIVNAIMELTM 216


>BT012499-1|AAS93770.1|  347|Drosophila melanogaster GH09281p
           protein.
          Length = 347

 Score = 38.7 bits (86), Expect = 0.004
 Identities = 18/33 (54%), Positives = 24/33 (72%)
 Frame = +3

Query: 69  IVMSQANVSRAKAVRALKNNQSDIVNAIMELTM 167
           +V  QA  SR KA++AL  N +D+VNAIM LT+
Sbjct: 314 LVQMQAACSRKKAIQALLKNDNDVVNAIMALTV 346


>AY089219-1|AAL89957.1|  340|Drosophila melanogaster AT01837p
           protein.
          Length = 340

 Score = 38.7 bits (86), Expect = 0.004
 Identities = 18/33 (54%), Positives = 24/33 (72%)
 Frame = +3

Query: 69  IVMSQANVSRAKAVRALKNNQSDIVNAIMELTM 167
           +V  QA  SR KA++AL  N +D+VNAIM LT+
Sbjct: 307 LVQMQAACSRKKAIQALLKNDNDVVNAIMALTV 339


>AE014134-190|AAF51428.2|  347|Drosophila melanogaster CG4415-PA
           protein.
          Length = 347

 Score = 38.7 bits (86), Expect = 0.004
 Identities = 18/33 (54%), Positives = 24/33 (72%)
 Frame = +3

Query: 69  IVMSQANVSRAKAVRALKNNQSDIVNAIMELTM 167
           +V  QA  SR KA++AL  N +D+VNAIM LT+
Sbjct: 314 LVQMQAACSRKKAIQALLKNDNDVVNAIMALTV 346


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,588,061
Number of Sequences: 53049
Number of extensions: 244797
Number of successful extensions: 387
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 379
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 387
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1763278080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)