BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbS20334 (499 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AC024847-3|AAF60854.1| 195|Caenorhabditis elegans Hypothetical ... 47 9e-06 AC024847-2|AAO21415.1| 197|Caenorhabditis elegans Hypothetical ... 47 9e-06 >AC024847-3|AAF60854.1| 195|Caenorhabditis elegans Hypothetical protein Y65B4BR.5a protein. Length = 195 Score = 46.8 bits (106), Expect = 9e-06 Identities = 22/33 (66%), Positives = 27/33 (81%) Frame = +3 Query: 69 IVMSQANVSRAKAVRALKNNQSDIVNAIMELTM 167 +V+SQAN +R KA+RALK +DIVNAIM LTM Sbjct: 163 LVISQANTTRNKAIRALKEADNDIVNAIMSLTM 195 >AC024847-2|AAO21415.1| 197|Caenorhabditis elegans Hypothetical protein Y65B4BR.5b protein. Length = 197 Score = 46.8 bits (106), Expect = 9e-06 Identities = 22/33 (66%), Positives = 27/33 (81%) Frame = +3 Query: 69 IVMSQANVSRAKAVRALKNNQSDIVNAIMELTM 167 +V+SQAN +R KA+RALK +DIVNAIM LTM Sbjct: 165 LVISQANTTRNKAIRALKEADNDIVNAIMSLTM 197 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 8,194,024 Number of Sequences: 27780 Number of extensions: 136000 Number of successful extensions: 278 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 276 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 278 length of database: 12,740,198 effective HSP length: 76 effective length of database: 10,628,918 effective search space used: 945973702 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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