Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20333
         (587 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    29   0.084
AB090818-1|BAC57911.1|  285|Anopheles gambiae gag-like protein p...    28   0.26 
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            24   4.2  
AY645021-1|AAT92557.1|  163|Anopheles gambiae even-skipped protein.    24   4.2  
CR954256-10|CAJ14151.1|  548|Anopheles gambiae putative alkaline...    23   5.5  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    23   5.5  
AY750997-1|AAV31069.1|  153|Anopheles gambiae peritrophin-1 prot...    23   7.3  
AY344823-1|AAR02434.1|  153|Anopheles gambiae peritrophin A prot...    23   7.3  
AY344828-1|AAR02439.1|  153|Anopheles gambiae peritrophin A prot...    23   9.7  
AY344827-1|AAR02438.1|  153|Anopheles gambiae peritrophin A prot...    23   9.7  
AY344826-1|AAR02437.1|  153|Anopheles gambiae peritrophin A prot...    23   9.7  
AY344825-1|AAR02436.1|  153|Anopheles gambiae peritrophin A prot...    23   9.7  
AY344824-1|AAR02435.1|  153|Anopheles gambiae peritrophin A prot...    23   9.7  
AY330172-1|AAQ16278.1|  170|Anopheles gambiae odorant-binding pr...    23   9.7  
AF515522-1|AAM61889.1|  222|Anopheles gambiae glutathione S-tran...    23   9.7  

>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 29.5 bits (63), Expect = 0.084
 Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
 Frame = +3

Query: 354 QAHKQKGPSRPQVDRPTKPQQNCIR*LQRQNQQESLLEVYPRVGKQ-QSLLQDMSTRGQT 530
           Q  +Q+   RPQ  RP + +    R  QR+  +  L+EV P  G+  +SLL  + T  +T
Sbjct: 463 QQPQQQQQQRPQQQRPQQQRPQQQRSQQRKPAKPELIEVSPNEGQDWESLLLLVQTAVRT 522



 Score = 23.4 bits (48), Expect = 5.5
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +1

Query: 244 QEEHMDFAYQLWTKDGKEIVKSYFPIQ 324
           Q + +   YQLW + G  +V    PI+
Sbjct: 6   QPQQVSAPYQLWPRKGSVVVMQPQPIE 32



 Score = 22.6 bits (46), Expect = 9.7
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = +3

Query: 354 QAHKQKGPSRPQVDRPTKPQQNCIR*LQRQNQQESL 461
           Q  +Q+   + Q  +  + QQ C +  Q+Q QQ+ L
Sbjct: 192 QQQQQQQQQQQQQQQQRQQQQQCQQQRQQQPQQQQL 227


>AB090818-1|BAC57911.1|  285|Anopheles gambiae gag-like protein
           protein.
          Length = 285

 Score = 27.9 bits (59), Expect = 0.26
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = +3

Query: 78  LTPHLHQELMTYWRSSCI*VSSLVNTRPLSPN 173
           L P  HQE MT WR     +      RP +P+
Sbjct: 100 LAPMSHQETMTLWREVAAALDGKAKCRPRTPS 131


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.8 bits (49), Expect = 4.2
 Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
 Frame = -2

Query: 157  LVFTNDDTHIQLLR---QYVISSWCKCGVRSQRTHGEDEGKQS 38
            LV  N+   +QL      +++S+WC   +    TH  D  K S
Sbjct: 1408 LVNLNNQKRVQLTGAKVHHIMSNWCYAEMTIDTTHTADGSKLS 1450


>AY645021-1|AAT92557.1|  163|Anopheles gambiae even-skipped protein.
          Length = 163

 Score = 23.8 bits (49), Expect = 4.2
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -3

Query: 162 AVSYSPMTTLIYSCSASTSSVLGASVA 82
           A+S SP++   +  SASTS+   ASV+
Sbjct: 87  ALSLSPVSVSKFDTSASTSNSSNASVS 113


>CR954256-10|CAJ14151.1|  548|Anopheles gambiae putative alkaline
           phosphatase protein.
          Length = 548

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -2

Query: 85  GVRSQRTHGEDEGKQSQSH 29
           G+R +RT GED  K  Q H
Sbjct: 284 GIRGRRTDGEDLIKHWQHH 302


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 128 YMSVVIGEYETAIAKCSEYLKEKKGEV 208
           YM  +I + E    +C + LKEK  +V
Sbjct: 550 YMEAIIVDTEKTARRCIQILKEKMLDV 576


>AY750997-1|AAV31069.1|  153|Anopheles gambiae peritrophin-1
           protein.
          Length = 153

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 428 VTPKTKPARKSPGSLPP 478
           VTP T+PA K   + PP
Sbjct: 81  VTPNTEPASKPSPNCPP 97


>AY344823-1|AAR02434.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 428 VTPKTKPARKSPGSLPP 478
           VTP T+PA K   + PP
Sbjct: 81  VTPNTEPASKPSPNCPP 97


>AY344828-1|AAR02439.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 22.6 bits (46), Expect = 9.7
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 428 VTPKTKPARKSPGSLPP 478
           VTP T+PA K   + PP
Sbjct: 81  VTPNTEPAPKPSPNCPP 97


>AY344827-1|AAR02438.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 22.6 bits (46), Expect = 9.7
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 428 VTPKTKPARKSPGSLPP 478
           VTP T+PA K   + PP
Sbjct: 81  VTPNTEPAPKPSPNCPP 97


>AY344826-1|AAR02437.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 22.6 bits (46), Expect = 9.7
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 428 VTPKTKPARKSPGSLPP 478
           VTP T+PA K   + PP
Sbjct: 81  VTPNTEPAPKPSPNCPP 97


>AY344825-1|AAR02436.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 22.6 bits (46), Expect = 9.7
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 428 VTPKTKPARKSPGSLPP 478
           VTP T+PA K   + PP
Sbjct: 81  VTPNTEPAPKPSPNCPP 97


>AY344824-1|AAR02435.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 22.6 bits (46), Expect = 9.7
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 428 VTPKTKPARKSPGSLPP 478
           VTP T+PA K   + PP
Sbjct: 81  VTPNTEPAPKPSPNCPP 97


>AY330172-1|AAQ16278.1|  170|Anopheles gambiae odorant-binding
           protein AgamOBP52 protein.
          Length = 170

 Score = 22.6 bits (46), Expect = 9.7
 Identities = 10/27 (37%), Positives = 11/27 (40%)
 Frame = +2

Query: 434 PKTKPARKSPGSLPPCWKTTEFTSRHV 514
           PK  P  K    LP C +T      HV
Sbjct: 20  PKQFPPSKKQSELPYCCQTEPLIPEHV 46


>AF515522-1|AAM61889.1|  222|Anopheles gambiae glutathione
           S-transferase protein.
          Length = 222

 Score = 22.6 bits (46), Expect = 9.7
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 78  LTPHLHQELMTYWRSSC 128
           + P     L +YWRSSC
Sbjct: 6   ILPESQPILYSYWRSSC 22


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 637,243
Number of Sequences: 2352
Number of extensions: 13544
Number of successful extensions: 48
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56347938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)