Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20333
         (587 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC050521-1|AAH50521.1|  764|Homo sapiens Rho guanine nucleotide ...    31   3.0  
D63476-1|BAA09763.2|  802|Homo sapiens KIAA0142 protein.               31   4.0  
BC060776-1|AAH60776.1|  803|Homo sapiens ARHGEF7 protein protein.      31   4.0  
BC033905-1|AAH33905.1|  753|Homo sapiens ARHGEF7 protein protein.      31   4.0  
AL834228-1|CAD38906.1|  812|Homo sapiens hypothetical protein pr...    31   4.0  
AL390754-5|CAM13628.1|  646|Homo sapiens Rho guanine nucleotide ...    31   4.0  
AL390754-4|CAI12463.1|  705|Homo sapiens Rho guanine nucleotide ...    31   4.0  
AL390754-2|CAI12461.1|  625|Homo sapiens Rho guanine nucleotide ...    31   4.0  
AL139086-4|CAM20788.1|  646|Homo sapiens Rho guanine nucleotide ...    31   4.0  
AL139086-3|CAI14672.1|  705|Homo sapiens Rho guanine nucleotide ...    31   4.0  
AL139086-2|CAI14671.1|  625|Homo sapiens Rho guanine nucleotide ...    31   4.0  
AB177849-1|BAD66827.1|  680|Homo sapiens KIAA0142 splice variant...    31   4.0  
AB177848-1|BAD66826.1|  691|Homo sapiens KIAA0142 splice variant...    31   4.0  
AB075521-1|BAE45764.1|  371|Homo sapiens putative protein produc...    31   4.0  

>BC050521-1|AAH50521.1|  764|Homo sapiens Rho guanine nucleotide
           exchange factor (GEF) 7 protein.
          Length = 764

 Score = 31.1 bits (67), Expect = 3.0
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = +2

Query: 422 HSVTPKTKPARKSPGSLPPCWKTTEFTSRHVHPRTNS 532
           H VTP +K A   P  L P + T    S H  P T +
Sbjct: 540 HPVTPSSKHADSKPAPLTPAYHTLPHPSHHGTPHTTT 576


>D63476-1|BAA09763.2|  802|Homo sapiens KIAA0142 protein.
          Length = 802

 Score = 30.7 bits (66), Expect = 4.0
 Identities = 14/35 (40%), Positives = 16/35 (45%)
 Frame = +2

Query: 422 HSVTPKTKPARKSPGSLPPCWKTTEFTSRHVHPRT 526
           H VTP +K A   P  L P + T    S H  P T
Sbjct: 578 HPVTPSSKHADSKPAPLTPAYHTLPHPSHHGTPHT 612


>BC060776-1|AAH60776.1|  803|Homo sapiens ARHGEF7 protein protein.
          Length = 803

 Score = 30.7 bits (66), Expect = 4.0
 Identities = 14/35 (40%), Positives = 16/35 (45%)
 Frame = +2

Query: 422 HSVTPKTKPARKSPGSLPPCWKTTEFTSRHVHPRT 526
           H VTP +K A   P  L P + T    S H  P T
Sbjct: 600 HPVTPSSKHADSKPAPLTPAYHTLPHPSHHGTPHT 634


>BC033905-1|AAH33905.1|  753|Homo sapiens ARHGEF7 protein protein.
          Length = 753

 Score = 30.7 bits (66), Expect = 4.0
 Identities = 14/35 (40%), Positives = 16/35 (45%)
 Frame = +2

Query: 422 HSVTPKTKPARKSPGSLPPCWKTTEFTSRHVHPRT 526
           H VTP +K A   P  L P + T    S H  P T
Sbjct: 550 HPVTPSSKHADSKPAPLTPAYHTLPHPSHHGTPHT 584


>AL834228-1|CAD38906.1|  812|Homo sapiens hypothetical protein
           protein.
          Length = 812

 Score = 30.7 bits (66), Expect = 4.0
 Identities = 14/35 (40%), Positives = 16/35 (45%)
 Frame = +2

Query: 422 HSVTPKTKPARKSPGSLPPCWKTTEFTSRHVHPRT 526
           H VTP +K A   P  L P + T    S H  P T
Sbjct: 609 HPVTPSSKHADSKPAPLTPAYHTLPHPSHHGTPHT 643


>AL390754-5|CAM13628.1|  646|Homo sapiens Rho guanine nucleotide
           exchange factor (GEF) 7 protein.
          Length = 646

 Score = 30.7 bits (66), Expect = 4.0
 Identities = 14/35 (40%), Positives = 16/35 (45%)
 Frame = +2

Query: 422 HSVTPKTKPARKSPGSLPPCWKTTEFTSRHVHPRT 526
           H VTP +K A   P  L P + T    S H  P T
Sbjct: 422 HPVTPSSKHADSKPAPLTPAYHTLPHPSHHGTPHT 456


>AL390754-4|CAI12463.1|  705|Homo sapiens Rho guanine nucleotide
           exchange factor (GEF) 7 protein.
          Length = 705

 Score = 30.7 bits (66), Expect = 4.0
 Identities = 14/35 (40%), Positives = 16/35 (45%)
 Frame = +2

Query: 422 HSVTPKTKPARKSPGSLPPCWKTTEFTSRHVHPRT 526
           H VTP +K A   P  L P + T    S H  P T
Sbjct: 422 HPVTPSSKHADSKPAPLTPAYHTLPHPSHHGTPHT 456


>AL390754-2|CAI12461.1|  625|Homo sapiens Rho guanine nucleotide
           exchange factor (GEF) 7 protein.
          Length = 625

 Score = 30.7 bits (66), Expect = 4.0
 Identities = 14/35 (40%), Positives = 16/35 (45%)
 Frame = +2

Query: 422 HSVTPKTKPARKSPGSLPPCWKTTEFTSRHVHPRT 526
           H VTP +K A   P  L P + T    S H  P T
Sbjct: 422 HPVTPSSKHADSKPAPLTPAYHTLPHPSHHGTPHT 456


>AL139086-4|CAM20788.1|  646|Homo sapiens Rho guanine nucleotide
           exchange factor (GEF) 7 protein.
          Length = 646

 Score = 30.7 bits (66), Expect = 4.0
 Identities = 14/35 (40%), Positives = 16/35 (45%)
 Frame = +2

Query: 422 HSVTPKTKPARKSPGSLPPCWKTTEFTSRHVHPRT 526
           H VTP +K A   P  L P + T    S H  P T
Sbjct: 422 HPVTPSSKHADSKPAPLTPAYHTLPHPSHHGTPHT 456


>AL139086-3|CAI14672.1|  705|Homo sapiens Rho guanine nucleotide
           exchange factor (GEF) 7 protein.
          Length = 705

 Score = 30.7 bits (66), Expect = 4.0
 Identities = 14/35 (40%), Positives = 16/35 (45%)
 Frame = +2

Query: 422 HSVTPKTKPARKSPGSLPPCWKTTEFTSRHVHPRT 526
           H VTP +K A   P  L P + T    S H  P T
Sbjct: 422 HPVTPSSKHADSKPAPLTPAYHTLPHPSHHGTPHT 456


>AL139086-2|CAI14671.1|  625|Homo sapiens Rho guanine nucleotide
           exchange factor (GEF) 7 protein.
          Length = 625

 Score = 30.7 bits (66), Expect = 4.0
 Identities = 14/35 (40%), Positives = 16/35 (45%)
 Frame = +2

Query: 422 HSVTPKTKPARKSPGSLPPCWKTTEFTSRHVHPRT 526
           H VTP +K A   P  L P + T    S H  P T
Sbjct: 422 HPVTPSSKHADSKPAPLTPAYHTLPHPSHHGTPHT 456


>AB177849-1|BAD66827.1|  680|Homo sapiens KIAA0142 splice variant 2
           protein.
          Length = 680

 Score = 30.7 bits (66), Expect = 4.0
 Identities = 14/35 (40%), Positives = 16/35 (45%)
 Frame = +2

Query: 422 HSVTPKTKPARKSPGSLPPCWKTTEFTSRHVHPRT 526
           H VTP +K A   P  L P + T    S H  P T
Sbjct: 456 HPVTPSSKHADSKPAPLTPAYHTLPHPSHHGTPHT 490


>AB177848-1|BAD66826.1|  691|Homo sapiens KIAA0142 splice variant 1
           protein.
          Length = 691

 Score = 30.7 bits (66), Expect = 4.0
 Identities = 14/35 (40%), Positives = 16/35 (45%)
 Frame = +2

Query: 422 HSVTPKTKPARKSPGSLPPCWKTTEFTSRHVHPRT 526
           H VTP +K A   P  L P + T    S H  P T
Sbjct: 578 HPVTPSSKHADSKPAPLTPAYHTLPHPSHHGTPHT 612


>AB075521-1|BAE45764.1|  371|Homo sapiens putative protein product
           of Nbla10314 protein.
          Length = 371

 Score = 30.7 bits (66), Expect = 4.0
 Identities = 14/35 (40%), Positives = 16/35 (45%)
 Frame = +2

Query: 422 HSVTPKTKPARKSPGSLPPCWKTTEFTSRHVHPRT 526
           H VTP +K A   P  L P + T    S H  P T
Sbjct: 168 HPVTPSSKHADSKPAPLTPAYHTLPHPSHHGTPHT 202


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,583,586
Number of Sequences: 237096
Number of extensions: 1955052
Number of successful extensions: 5479
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 5192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5479
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6155099854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)