Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20333
         (587 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069166-1|AAL39311.1|  393|Drosophila melanogaster GH20337p pro...    29   4.7  
AE014134-323|AAN10438.1|  393|Drosophila melanogaster CG4233-PC,...    29   4.7  
AE014134-322|AAN10437.1|  431|Drosophila melanogaster CG4233-PB,...    29   4.7  
AE014134-321|AAF51320.1|  424|Drosophila melanogaster CG4233-PA,...    29   4.7  
AY089514-1|AAL90252.1|  709|Drosophila melanogaster GH23026p pro...    29   6.2  
AE014297-807|AAS65127.1|  709|Drosophila melanogaster CG9801-PC,...    29   6.2  
AE014297-806|AAF54283.1|  709|Drosophila melanogaster CG9801-PB,...    29   6.2  
AE014297-805|AAF54282.1|  709|Drosophila melanogaster CG9801-PA,...    29   6.2  
AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA ...    29   6.2  
M84606-1|AAA28490.1|  697|Drosophila melanogaster transmembrane ...    28   8.2  
BT016046-1|AAV36931.1|  699|Drosophila melanogaster LP20007p pro...    28   8.2  
AY089239-1|AAL89977.1|  319|Drosophila melanogaster AT02809p pro...    28   8.2  
AF132180-1|AAD34768.1|  861|Drosophila melanogaster unknown prot...    28   8.2  
AE014298-1680|AAF48089.1|  699|Drosophila melanogaster CG9355-PA...    28   8.2  
AE014298-1352|AAF46511.2| 1003|Drosophila melanogaster CG3003-PB...    28   8.2  
AE014134-371|AAN10418.1|  319|Drosophila melanogaster CG31682-PA...    28   8.2  
AE013599-163|AAF57269.1|  861|Drosophila melanogaster CG8325-PA ...    28   8.2  

>AY069166-1|AAL39311.1|  393|Drosophila melanogaster GH20337p
           protein.
          Length = 393

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
 Frame = +3

Query: 192 KRRERLSRKP*SV*SKTARGTHGLRLPV--MDKGWKGNRQILLPHP 323
           K  +RL+ K  +V +++  GT  LR+    + K W+GNR+I +P P
Sbjct: 79  KGSKRLAAKH-NVTAQSISGTGALRIGAAFLAKFWQGNREIYIPSP 123


>AE014134-323|AAN10438.1|  393|Drosophila melanogaster CG4233-PC,
           isoform C protein.
          Length = 393

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
 Frame = +3

Query: 192 KRRERLSRKP*SV*SKTARGTHGLRLPV--MDKGWKGNRQILLPHP 323
           K  +RL+ K  +V +++  GT  LR+    + K W+GNR+I +P P
Sbjct: 79  KGSKRLAAKH-NVTAQSISGTGALRIGAAFLAKFWQGNREIYIPSP 123


>AE014134-322|AAN10437.1|  431|Drosophila melanogaster CG4233-PB,
           isoform B protein.
          Length = 431

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
 Frame = +3

Query: 192 KRRERLSRKP*SV*SKTARGTHGLRLPV--MDKGWKGNRQILLPHP 323
           K  +RL+ K  +V +++  GT  LR+    + K W+GNR+I +P P
Sbjct: 117 KGSKRLAAKH-NVTAQSISGTGALRIGAAFLAKFWQGNREIYIPSP 161


>AE014134-321|AAF51320.1|  424|Drosophila melanogaster CG4233-PA,
           isoform A protein.
          Length = 424

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
 Frame = +3

Query: 192 KRRERLSRKP*SV*SKTARGTHGLRLPV--MDKGWKGNRQILLPHP 323
           K  +RL+ K  +V +++  GT  LR+    + K W+GNR+I +P P
Sbjct: 110 KGSKRLAAKH-NVTAQSISGTGALRIGAAFLAKFWQGNREIYIPSP 154


>AY089514-1|AAL90252.1|  709|Drosophila melanogaster GH23026p
           protein.
          Length = 709

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +2

Query: 416 KLHSVTPKTKPARKSPGSLPP 478
           +LH  TP T+PAR+S    PP
Sbjct: 502 RLHPSTPPTRPARQSKAESPP 522


>AE014297-807|AAS65127.1|  709|Drosophila melanogaster CG9801-PC,
           isoform C protein.
          Length = 709

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +2

Query: 416 KLHSVTPKTKPARKSPGSLPP 478
           +LH  TP T+PAR+S    PP
Sbjct: 502 RLHPSTPPTRPARQSKAESPP 522


>AE014297-806|AAF54283.1|  709|Drosophila melanogaster CG9801-PB,
           isoform B protein.
          Length = 709

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +2

Query: 416 KLHSVTPKTKPARKSPGSLPP 478
           +LH  TP T+PAR+S    PP
Sbjct: 502 RLHPSTPPTRPARQSKAESPP 522


>AE014297-805|AAF54282.1|  709|Drosophila melanogaster CG9801-PA,
           isoform A protein.
          Length = 709

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +2

Query: 416 KLHSVTPKTKPARKSPGSLPP 478
           +LH  TP T+PAR+S    PP
Sbjct: 502 RLHPSTPPTRPARQSKAESPP 522


>AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA
           protein.
          Length = 1286

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 17/51 (33%), Positives = 24/51 (47%)
 Frame = +2

Query: 434 PKTKPARKSPGSLPPCWKTTEFTSRHVHPRTNSTLSSXTRKVLSG*PVSST 586
           P T P+   P +  P   TT  TSR       ST ++ TR+  +  P S+T
Sbjct: 370 PTTTPSTSRPTTTTPRSTTTTSTSRPTTTTPRSTTTTTTRRPTTTTPRSTT 420


>M84606-1|AAA28490.1|  697|Drosophila melanogaster transmembrane
           protein protein.
          Length = 697

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
 Frame = +3

Query: 369 KGPSRPQV-DRPTKPQQNCIR*LQRQNQQESLLEVYPRVGKQQSLLQDMSTRGQT 530
           KGP  PQ+  RP  P Q  ++   +Q QQ+       +  +QQ  + D+S  G +
Sbjct: 177 KGPPPPQLQQRPQPPPQLQLQVQPQQQQQQQQQHTQQQGQQQQVQVPDLSVGGSS 231


>BT016046-1|AAV36931.1|  699|Drosophila melanogaster LP20007p
           protein.
          Length = 699

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
 Frame = +3

Query: 369 KGPSRPQV-DRPTKPQQNCIR*LQRQNQQESLLEVYPRVGKQQSLLQDMSTRGQT 530
           KGP  PQ+  RP  P Q  ++   +Q QQ+       +  +QQ  + D+S  G +
Sbjct: 179 KGPPPPQLQQRPQPPPQLQLQVQPQQQQQQQQQHTQQQGQQQQVQVPDLSVGGSS 233


>AY089239-1|AAL89977.1|  319|Drosophila melanogaster AT02809p
           protein.
          Length = 319

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -1

Query: 485 SNTGVNFQETFLLVLSLESPNAILLWFCWSINL 387
           S   +   ETF  V S +  N+ +LW C  ++L
Sbjct: 87  STNDITINETFDFVTSFDRRNSAILWMCERVDL 119


>AF132180-1|AAD34768.1|  861|Drosophila melanogaster unknown
           protein.
          Length = 861

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -2

Query: 283 LSITGRRSPCVPLAVFDQTLHGFLDNLSLLFLQ 185
           L +T  R P   L V +  LH F DNL LL ++
Sbjct: 580 LLLTSSRRPREALGVVEDALHEFPDNLQLLHVK 612


>AE014298-1680|AAF48089.1|  699|Drosophila melanogaster CG9355-PA
           protein.
          Length = 699

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
 Frame = +3

Query: 369 KGPSRPQV-DRPTKPQQNCIR*LQRQNQQESLLEVYPRVGKQQSLLQDMSTRGQT 530
           KGP  PQ+  RP  P Q  ++   +Q QQ+       +  +QQ  + D+S  G +
Sbjct: 179 KGPPPPQLQQRPQPPPQLQLQVQPQQQQQQQQQHTQQQGQQQQVQVPDLSVGGSS 233


>AE014298-1352|AAF46511.2| 1003|Drosophila melanogaster CG3003-PB
           protein.
          Length = 1003

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 12/22 (54%), Positives = 17/22 (77%)
 Frame = -3

Query: 120 SASTSSVLGASVALEASAHTAR 55
           +A+  S+LGA+ AL+ASAH  R
Sbjct: 260 AAAVESLLGAAAALQASAHVQR 281


>AE014134-371|AAN10418.1|  319|Drosophila melanogaster CG31682-PA
           protein.
          Length = 319

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -1

Query: 485 SNTGVNFQETFLLVLSLESPNAILLWFCWSINL 387
           S   +   ETF  V S +  N+ +LW C  ++L
Sbjct: 87  STNDITINETFDFVTSFDRRNSAILWMCERVDL 119


>AE013599-163|AAF57269.1|  861|Drosophila melanogaster CG8325-PA
           protein.
          Length = 861

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -2

Query: 283 LSITGRRSPCVPLAVFDQTLHGFLDNLSLLFLQ 185
           L +T  R P   L V +  LH F DNL LL ++
Sbjct: 580 LLLTSSRRPREALGVVEDALHEFPDNLQLLHVK 612


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,652,129
Number of Sequences: 53049
Number of extensions: 592916
Number of successful extensions: 2397
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2281
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2393
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2358819486
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)