Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20333
         (587 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g62250.2 68414.m07023 expressed protein                             30   1.00 
At1g62250.1 68414.m07022 expressed protein                             30   1.00 
At5g51650.1 68418.m06404 hypothetical protein                          29   2.3  
At5g09400.1 68418.m01089 potassium transporter family protein si...    29   2.3  
At1g77240.1 68414.m08996 AMP-binding protein, putative strong si...    29   2.3  
At5g35560.1 68418.m04231 DENN (AEX-3) domain-containing protein ...    29   3.0  
At4g13290.1 68417.m02078 cytochrome P450 71A19, putative (CYP71A...    29   3.0  
At2g23190.1 68415.m02770 cytochrome P450, putative Similar to  C...    29   3.0  
At1g67890.1 68414.m07752 protein kinase family protein contains ...    29   3.0  
At1g56660.1 68414.m06516 expressed protein                             29   3.0  
At3g47730.1 68416.m05200 ABC transporter family protein AbcA, Di...    28   4.0  

>At1g62250.2 68414.m07023 expressed protein
          Length = 223

 Score = 30.3 bits (65), Expect = 1.00
 Identities = 12/43 (27%), Positives = 23/43 (53%)
 Frame = +3

Query: 39  LCLPSSSPCVRWLLTPHLHQELMTYWRSSCI*VSSLVNTRPLS 167
           LC P  +  +RW  TP +  E+++ WR  C  +++    R ++
Sbjct: 181 LCTPQPT-VIRWSSTPSVSDEILSKWRGFCAVIANAYYIRGMA 222


>At1g62250.1 68414.m07022 expressed protein
          Length = 267

 Score = 30.3 bits (65), Expect = 1.00
 Identities = 12/43 (27%), Positives = 23/43 (53%)
 Frame = +3

Query: 39  LCLPSSSPCVRWLLTPHLHQELMTYWRSSCI*VSSLVNTRPLS 167
           LC P  +  +RW  TP +  E+++ WR  C  +++    R ++
Sbjct: 181 LCTPQPT-VIRWSSTPSVSDEILSKWRGFCAVIANAYYIRGMA 222


>At5g51650.1 68418.m06404 hypothetical protein 
          Length = 206

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = +1

Query: 181 ISEGKEGRGYQGSREASDRKRQEEHMDFAYQLWTKDGKEIVKSYFPI 321
           + E KEG   QG  E  ++   E+  + A+  W KDG   V   + I
Sbjct: 38  VQERKEGLEAQGKEEGVEKVLVEKEKEEAHVSWEKDGSVSVAYTYAI 84


>At5g09400.1 68418.m01089 potassium transporter family protein
           similar to K+ transporter HAK5 [Arabidopsis thaliana]
           GI:7108597; contains Pfam profile PF02705: K+ potassium
           transporter; KUP/HAK/KT Transporter family member,
           PMID:11500563; Note: possible sequencing error causes a
           frameshift in the 4th exon|15810448|gb|AY056263
          Length = 858

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 19/73 (26%), Positives = 35/73 (47%)
 Frame = -3

Query: 225 FTASLITSPFFSFRYSEHLAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKA 46
           F +S+  S F+   +  ++A  ++   MTT  +SC    S+ LG    L+   HT+R   
Sbjct: 411 FFSSVPGSAFWPVLFIANIAALIASRTMTTATFSC-IKQSTALGCFPRLKI-IHTSRKFM 468

Query: 45  NKVSLILAQWLSL 7
            ++ + +  W  L
Sbjct: 469 GQIYIPVLNWFLL 481


>At1g77240.1 68414.m08996 AMP-binding protein, putative strong
           similarity to AMP-binding protein GI:1903034 from
           [Brassica napus]; contains Pfam AMP-binding domain
           PF00501
          Length = 545

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
 Frame = +1

Query: 301 VKSYFPIQFRVIFTEQTVKLINKR-DHHALKLIDQQNHNKIAFGDSKDKTSKKVSWKFTP 477
           V S + +QF V  +   +  IN R D HAL ++ + + +K+ F D    +    +  F P
Sbjct: 76  VPSVYELQFAVPMSGAVLNNINPRLDAHALSVLLRHSESKLVFVDHHSSSLVLEAVSFLP 135

Query: 478 VLENNRV 498
             E  R+
Sbjct: 136 KDERPRL 142


>At5g35560.1 68418.m04231 DENN (AEX-3) domain-containing protein
           contains Pfam domain PF02141: DENN (AEX-3) domain; this
           cDNA may contain an anomalously spliced intron...will
           require further examination.
          Length = 765

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
 Frame = +3

Query: 351 CQAHKQKGPSRPQVDRPTKPQQNCIR*LQRQNQQESLLEVYPRVG-KQQSLLQDMSTRGQ 527
           C+A+++   S   +DR TK   +    + +Q ++  L E  P +       + D ST  Q
Sbjct: 358 CEANQKADDSAESIDRVTKADDSLP--IIKQGRESCLPEPGPLLRCPYLDEISDSSTSFQ 415

Query: 528 TVP*ARXHERFLVDD 572
             P  R H R   DD
Sbjct: 416 AAPCERRHSRTSADD 430


>At4g13290.1 68417.m02078 cytochrome P450 71A19, putative (CYP71A19)
           Identical to Cytochrome P450 (SP:Q9T0K0) [Arabidopsis
           thaliana]; similar to cytochrome P450LXXIA1, Persea
           americana, M32885
          Length = 490

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = -3

Query: 384 GVMVPFVYELDSLLGEDHSKLDGEVRFDDFL 292
           G  +P +  +D + G+DH   + + RFD+FL
Sbjct: 221 GEYIPSLSWIDKIRGQDHKMEEVDKRFDEFL 251


>At2g23190.1 68415.m02770 cytochrome P450, putative Similar to
           Cytochrome P450 91A1 (SP:Q9FG65) [Arabidopsis thaliana];
          Length = 543

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
 Frame = -3

Query: 270 VGEVHVFLLPF--SIRRFTASLITSPFFSFRYSEHLAIAVS 154
           +G +H+   P   +   F+ SL  +P FS R   HL + VS
Sbjct: 86  IGHLHLLKQPLHRTFLSFSQSLGDAPIFSLRLGNHLTVVVS 126


>At1g67890.1 68414.m07752 protein kinase family protein contains
           Pfam domain, PF00069: Protein kinase domain
          Length = 765

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = +2

Query: 422 HSVTPKTKPARKSPGSLPPCWKTTEFTS-RHVHP 520
           HS +PK +P+R++ G   P W+ T   S RH  P
Sbjct: 43  HSSSPK-RPSRRNSGEGTPLWRKTGAASFRHASP 75


>At1g56660.1 68414.m06516 expressed protein
          Length = 522

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 11/37 (29%), Positives = 23/37 (62%)
 Frame = +1

Query: 187 EGKEGRGYQGSREASDRKRQEEHMDFAYQLWTKDGKE 297
           +GK+ +G +G  E  D ++++EH +   ++  KD K+
Sbjct: 213 KGKKEKGEKGDLEKEDEEKKKEHDETDQEMKEKDSKK 249


>At3g47730.1 68416.m05200 ABC transporter family protein AbcA,
           Dictyostelium discoideum, DDU66526
          Length = 983

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
 Frame = +1

Query: 385 LKLIDQQNHNKIAFGDSKDKTSK--KVSWKFTPVLENNRVYFKTCPPEDKQYL 537
           +  ++  NHN  A  DS++   K  K   K  P+ E N+ +     P DK+ L
Sbjct: 762 ISFVESNNHNGEAGSDSREPVKKFFKDHLKVKPI-EENKAFMTFVIPHDKENL 813


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,510,397
Number of Sequences: 28952
Number of extensions: 288872
Number of successful extensions: 1055
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1022
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1054
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1161268208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)