Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20332
         (579 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    25   1.8  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    25   1.8  
Z22930-5|CAA80517.1|  275|Anopheles gambiae trypsin protein.           23   5.4  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    23   5.4  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    23   5.4  
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    23   5.4  
AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein p...    23   5.4  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   7.2  

>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 25.0 bits (52), Expect = 1.8
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = +2

Query: 11  ISISRTYILSLHWSNVKDIIHCSRNLLMIFVL*QDT 118
           + + R  I      NVKD ++   NL ++++  +DT
Sbjct: 441 LQVGRFGIRETLLDNVKDEVYAKENLALVYIFVKDT 476


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 25.0 bits (52), Expect = 1.8
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = +2

Query: 11  ISISRTYILSLHWSNVKDIIHCSRNLLMIFVL*QDT 118
           + + R  I      NVKD ++   NL ++++  +DT
Sbjct: 441 LQVGRFGIRETLLDNVKDEVYAKENLALVYIFVKDT 476


>Z22930-5|CAA80517.1|  275|Anopheles gambiae trypsin protein.
          Length = 275

 Score = 23.4 bits (48), Expect = 5.4
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = -1

Query: 201 AVLVVALYCAQPRI 160
           AVLVVA+ CAQ R+
Sbjct: 11  AVLVVAVACAQARV 24


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 23.4 bits (48), Expect = 5.4
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = -1

Query: 444  APGHIYPPLFLQRRRKYLGKSTLGTKLSHCVLLPC 340
            A G  YPPL  QRRR+    S       H ++ PC
Sbjct: 1314 AAGGGYPPLMPQRRRRNSSNS------KHDLMSPC 1342


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 23.4 bits (48), Expect = 5.4
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = -1

Query: 444  APGHIYPPLFLQRRRKYLGKSTLGTKLSHCVLLPC 340
            A G  YPPL  QRRR+    S       H ++ PC
Sbjct: 1311 AAGGGYPPLMPQRRRRNSSNS------KHDLMSPC 1339


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 23.4 bits (48), Expect = 5.4
 Identities = 14/36 (38%), Positives = 16/36 (44%)
 Frame = +2

Query: 437 PGARTRRSSLFGRCQHECAGRFMFSWRLRQ*RVSSS 544
           PG + RRS     C     G F  S   RQ R SS+
Sbjct: 232 PGEKARRSDPAAGCPRSGQGNFQLSPDFRQ-RASSN 266


>AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein
           protein.
          Length = 344

 Score = 23.4 bits (48), Expect = 5.4
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +2

Query: 419 SGGYMCPGARTRRS 460
           +G YMCP  RT RS
Sbjct: 331 TGSYMCPRRRTIRS 344


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 23.0 bits (47), Expect = 7.2
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = -2

Query: 299  PYGADAHAGHVRGG 258
            PYGAD   G  RGG
Sbjct: 1149 PYGADVSRGDHRGG 1162


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 696,902
Number of Sequences: 2352
Number of extensions: 15297
Number of successful extensions: 35
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55086417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)