Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20332
         (579 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003457-1|AAO39460.1|  985|Drosophila melanogaster RH34107p pro...   158   6e-39
AE014297-1126|AAF54512.1|  985|Drosophila melanogaster CG3999-PA...   158   6e-39
AY113413-1|AAM29418.1|  675|Drosophila melanogaster RE14652p pro...    29   6.0  
AE013599-2713|AAF57678.2|  675|Drosophila melanogaster CG5226-PA...    29   6.0  

>BT003457-1|AAO39460.1|  985|Drosophila melanogaster RH34107p
           protein.
          Length = 985

 Score =  158 bits (383), Expect = 6e-39
 Identities = 70/95 (73%), Positives = 78/95 (82%)
 Frame = +3

Query: 255 PASAHMAGMRVCAIRVTPTGDIDMAHLKDMVEEHSEKVSCLMLTYPSTFGVFEEKAADIC 434
           PASA MAGM+V  IR+   G IDMAHL+   EEH+ ++SCLM+TYPST GVFEE  ADIC
Sbjct: 631 PASAQMAGMKVEPIRILSNGSIDMAHLRAKAEEHAHELSCLMITYPSTMGVFEETVADIC 690

Query: 435 ALVHAHGGQVYLDGANMNAQVGLCSPGDYGSDVSH 539
            L+H HGGQVYLDGANMNAQVGLC PGDYGSDVSH
Sbjct: 691 TLIHKHGGQVYLDGANMNAQVGLCRPGDYGSDVSH 725



 Score =  157 bits (381), Expect = 1e-38
 Identities = 64/85 (75%), Positives = 76/85 (89%)
 Frame = +1

Query: 1   PCSYKHFTDIHPFAPLEQCQGYHTLFEELANDLCAITGYDRVSFQPNSGAQGEYAGLRTI 180
           PCS++HFTDIHPFAP+EQ QG+H +F+EL +DLC ITGYDR+SFQPNSGAQGEYAGLR I
Sbjct: 546 PCSFRHFTDIHPFAPVEQAQGFHQMFKELEHDLCEITGYDRISFQPNSGAQGEYAGLRAI 605

Query: 181 KRYHEYRGDAGRNICLIPVSAHGTN 255
           + YHE+R +  RNICLIP+SAHGTN
Sbjct: 606 RSYHEHRNEGHRNICLIPISAHGTN 630


>AE014297-1126|AAF54512.1|  985|Drosophila melanogaster CG3999-PA
           protein.
          Length = 985

 Score =  158 bits (383), Expect = 6e-39
 Identities = 70/95 (73%), Positives = 78/95 (82%)
 Frame = +3

Query: 255 PASAHMAGMRVCAIRVTPTGDIDMAHLKDMVEEHSEKVSCLMLTYPSTFGVFEEKAADIC 434
           PASA MAGM+V  IR+   G IDMAHL+   EEH+ ++SCLM+TYPST GVFEE  ADIC
Sbjct: 631 PASAQMAGMKVEPIRILSNGSIDMAHLRAKAEEHAHELSCLMITYPSTMGVFEETVADIC 690

Query: 435 ALVHAHGGQVYLDGANMNAQVGLCSPGDYGSDVSH 539
            L+H HGGQVYLDGANMNAQVGLC PGDYGSDVSH
Sbjct: 691 TLIHKHGGQVYLDGANMNAQVGLCRPGDYGSDVSH 725



 Score =  157 bits (381), Expect = 1e-38
 Identities = 64/85 (75%), Positives = 76/85 (89%)
 Frame = +1

Query: 1   PCSYKHFTDIHPFAPLEQCQGYHTLFEELANDLCAITGYDRVSFQPNSGAQGEYAGLRTI 180
           PCS++HFTDIHPFAP+EQ QG+H +F+EL +DLC ITGYDR+SFQPNSGAQGEYAGLR I
Sbjct: 546 PCSFRHFTDIHPFAPVEQAQGFHQMFKELEHDLCEITGYDRISFQPNSGAQGEYAGLRAI 605

Query: 181 KRYHEYRGDAGRNICLIPVSAHGTN 255
           + YHE+R +  RNICLIP+SAHGTN
Sbjct: 606 RSYHEHRNEGHRNICLIPISAHGTN 630


>AY113413-1|AAM29418.1|  675|Drosophila melanogaster RE14652p
           protein.
          Length = 675

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -2

Query: 179 IVRNPAYSPWAPLLGWKDTRSYP 111
           ++RNP Y  W   LG  + +SYP
Sbjct: 570 VIRNPTYGAWNADLGMIEQKSYP 592


>AE013599-2713|AAF57678.2|  675|Drosophila melanogaster CG5226-PA
           protein.
          Length = 675

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -2

Query: 179 IVRNPAYSPWAPLLGWKDTRSYP 111
           ++RNP Y  W   LG  + +SYP
Sbjct: 570 VIRNPTYGAWNADLGMIEQKSYP 592


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,770,995
Number of Sequences: 53049
Number of extensions: 710287
Number of successful extensions: 1636
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1636
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2296745289
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)