Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20332
(579 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 27 0.13
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 23 2.9
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 22 3.8
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 22 3.8
DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid p... 21 6.7
AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatas... 21 6.7
AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 21 6.7
EF032397-1|ABM97933.1| 200|Apis mellifera arginine kinase protein. 21 8.8
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 21 8.8
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 21 8.8
AF023619-1|AAC39040.1| 355|Apis mellifera arginine kinase protein. 21 8.8
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 27.1 bits (57), Expect = 0.13
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -2
Query: 146 PLLGWKDTRSYP 111
PL+GWKD RS+P
Sbjct: 200 PLVGWKDKRSHP 211
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 22.6 bits (46), Expect = 2.9
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -1
Query: 396 YLGKSTLGTKLSHCVLLPC 340
YL +TL +LS CV+L C
Sbjct: 141 YLLFATLPLRLSFCVVLAC 159
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 22.2 bits (45), Expect = 3.8
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 303 TPTGDIDMAHLKDMVEEHSEK 365
TP G++ A LKD V+E E+
Sbjct: 170 TPIGNLSHALLKDPVKEFWER 190
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 22.2 bits (45), Expect = 3.8
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 303 TPTGDIDMAHLKDMVEEHSEK 365
TP G++ A LKD V+E E+
Sbjct: 223 TPIGNLSHALLKDPVKEFWER 243
>DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid
phosphatase protein.
Length = 373
Score = 21.4 bits (43), Expect = 6.7
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +1
Query: 385 LTQVLSASLKKKRRIYV 435
+ V+S + KKKR+IY+
Sbjct: 237 MLDVVSGTQKKKRKIYL 253
>AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatase
precursor protein.
Length = 388
Score = 21.4 bits (43), Expect = 6.7
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +1
Query: 385 LTQVLSASLKKKRRIYV 435
+ V+S + KKKR+IY+
Sbjct: 252 MLDVVSGTQKKKRKIYL 268
>AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor
protein.
Length = 405
Score = 21.4 bits (43), Expect = 6.7
Identities = 11/44 (25%), Positives = 19/44 (43%)
Frame = -3
Query: 160 IRLGPHYWVGKTPDRILL*HKDH*QVPRTVYDILDIAPMERKDV 29
I +G H W KT + H + + YDI++ + D+
Sbjct: 215 IVVGEHDWSSKTETNATVLHSINKVIIHPKYDIIEKDDWQINDI 258
>EF032397-1|ABM97933.1| 200|Apis mellifera arginine kinase protein.
Length = 200
Score = 21.0 bits (42), Expect = 8.8
Identities = 11/43 (25%), Positives = 21/43 (48%)
Frame = +1
Query: 31 HPFAPLEQCQGYHTLFEELANDLCAITGYDRVSFQPNSGAQGE 159
+PF P Y + E++++ L + G + +F P +G E
Sbjct: 117 YPFNPCLTEAQYKEMEEKVSSTLSGLEGELKGTFYPLTGMSKE 159
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 21.0 bits (42), Expect = 8.8
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = +2
Query: 425 GYMCPGARTRRSSLFG 472
GY+CPG + L G
Sbjct: 201 GYLCPGMALSQFDLMG 216
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.0 bits (42), Expect = 8.8
Identities = 12/46 (26%), Positives = 17/46 (36%)
Frame = +3
Query: 171 AHNKALPRVPRGRRTEHLLDPGERARHQPASAHMAGMRVCAIRVTP 308
+ ++ R RGR EH + P PA + I V P
Sbjct: 311 SRERSRDRRGRGRSREHRIIPSHYIEQIPAPVYYGNFPPRPIMVRP 356
>AF023619-1|AAC39040.1| 355|Apis mellifera arginine kinase protein.
Length = 355
Score = 21.0 bits (42), Expect = 8.8
Identities = 11/43 (25%), Positives = 21/43 (48%)
Frame = +1
Query: 31 HPFAPLEQCQGYHTLFEELANDLCAITGYDRVSFQPNSGAQGE 159
+PF P Y + E++++ L + G + +F P +G E
Sbjct: 133 YPFNPCLTEAQYKEMEEKVSSTLSGLEGELKGTFYPLTGMSKE 175
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,072
Number of Sequences: 438
Number of extensions: 4349
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16748661
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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