Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20329
(410 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0670 + 19348468-19348949,19351594-19351724,19352433-19353238 33 0.067
09_04_0600 + 18883094-18883393,18883606-18883755,18883851-188841... 31 0.27
10_08_0630 - 19410852-19411235,19411370-19412257,19412440-194129... 29 1.4
08_01_0651 + 5622786-5624165,5624720-5624881,5624984-5625173,562... 29 1.4
06_03_1121 + 27767707-27768065,27768612-27769034,27770013-277701... 29 1.4
09_02_0326 + 7279991-7280053,7280239-7280422,7280706-7280779 29 1.9
02_05_0827 - 32051086-32051445 29 1.9
04_03_0475 - 16343083-16344213,16344394-16345380,16345467-16345571 28 2.5
02_02_0041 + 6275636-6275749,6276659-6276695,6276927-6277036,627... 28 2.5
02_02_0550 - 11413912-11414079,11414338-11414513,11414617-114146... 28 3.3
10_02_0129 + 5584585-5584732,5586567-5586968,5587038-5587106,558... 27 4.4
04_03_0805 - 19850355-19850817,19851146-19851227,19852403-19852412 27 4.4
04_03_0249 + 13462985-13463170,13463190-13463297 27 4.4
03_05_0868 + 28385066-28385478,28386050-28386167,28386365-283867... 27 4.4
02_05_1329 - 35724567-35725255,35725626-35725682,35727667-35729050 27 4.4
11_03_0027 + 9078792-9079613 27 5.8
05_01_0245 - 1829921-1830359,1830449-1831002,1832016-1832144,183... 27 5.8
03_01_0200 - 1589768-1590023,1591134-1591264 27 5.8
02_05_0687 - 30909791-30910293,30910440-30910503 27 5.8
02_04_0264 - 21393029-21393046,21394249-21394814,21395005-21395623 27 5.8
02_04_0099 - 19728053-19728589 27 5.8
11_06_0356 - 22654329-22654571,22654695-22654898,22655065-226553... 27 7.7
10_07_0016 + 11826066-11826773 27 7.7
08_01_0064 + 444888-444959,445073-445277,445736-445901,446029-44... 27 7.7
05_03_0458 + 14280953-14281866,14281964-14282912 27 7.7
03_05_0780 + 27646936-27647084,27647168-27647289,27649380-276494... 27 7.7
02_02_0097 - 6746934-6747005,6747372-6748325,6748421-6748435,674... 27 7.7
01_06_1377 + 36764461-36765339 27 7.7
01_01_0791 - 6138751-6138894,6139032-6139167,6139573-6139766,613... 27 7.7
>09_04_0670 + 19348468-19348949,19351594-19351724,19352433-19353238
Length = 472
Score = 33.5 bits (73), Expect = 0.067
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +3
Query: 243 SESESVTRTVWPAAVHRCKPPEHSHHQLYDAS-LPPACEQXFGGISP 380
S S V+R V P+ H HHQ+ A L P +Q FGG SP
Sbjct: 356 SSSVDVSRMVQPSPAAAAGAEHHHHHQIPMAQPLVPNLQQQFGGSSP 402
>09_04_0600 +
18883094-18883393,18883606-18883755,18883851-18884142,
18884697-18884858,18884958-18885021,18887573-18888080
Length = 491
Score = 31.5 bits (68), Expect = 0.27
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -3
Query: 327 TAGDGSVRAACTCGQLRARRYALP 256
T DG+VRAA CG+ AR A+P
Sbjct: 30 TTTDGAVRAAAACGEAHARGVAMP 53
>10_08_0630 -
19410852-19411235,19411370-19412257,19412440-19412941,
19413662-19414135,19414982-19415040,19415468-19415629
Length = 822
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/67 (26%), Positives = 25/67 (37%), Gaps = 7/67 (10%)
Frame = +2
Query: 230 KDLHFGKRVGNAYRLARSCPQVQAART----LPSPAVRCIPPPRLRTGLRGNI---AAQD 388
K+ G+ G YR + PSP PPP G+ G + A
Sbjct: 261 KESRAGRNDGKTYRFFTQLEALHGTAAGVVAAPSPVTSLAPPPATAVGVSGGVRAPAEPP 320
Query: 389 PVIVMGH 409
P +VMG+
Sbjct: 321 PAVVMGN 327
>08_01_0651 +
5622786-5624165,5624720-5624881,5624984-5625173,
5625253-5625284
Length = 587
Score = 29.1 bits (62), Expect = 1.4
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = +1
Query: 295 ASRPNTPITSCTMHPSPPPANRXSGEYRRSGPCHC 399
AS P I T PPP NR +R S PC C
Sbjct: 117 ASAPCVDIL-LTSDRQPPPMNRRMRHHRASAPCPC 150
>06_03_1121 +
27767707-27768065,27768612-27769034,27770013-27770175,
27770271-27770381,27770895-27770963,27771117-27771203,
27771967-27772752
Length = 665
Score = 29.1 bits (62), Expect = 1.4
Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = +1
Query: 292 GASRPNTPITSCT-MHPSPPPANRXS-GEYRRSG 387
G RPN P+ M P PPP NR + E RR G
Sbjct: 571 GPGRPNRPVGMAPFMPPPPPPNNRGTKREQRRPG 604
>09_02_0326 + 7279991-7280053,7280239-7280422,7280706-7280779
Length = 106
Score = 28.7 bits (61), Expect = 1.9
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +2
Query: 281 SCPQVQAARTLPSPAVRCIPPPR 349
S PQV+ +TLP PA PPP+
Sbjct: 82 SKPQVKEKKTLPLPAPAAAPPPQ 104
>02_05_0827 - 32051086-32051445
Length = 119
Score = 28.7 bits (61), Expect = 1.9
Identities = 15/33 (45%), Positives = 16/33 (48%)
Frame = +2
Query: 284 CPQVQAARTLPSPAVRCIPPPRLRTGLRGNIAA 382
C V A P+ A RC P PRL G G AA
Sbjct: 68 CGLVVAMTRCPAAAARCPPDPRLSAGFGGWPAA 100
>04_03_0475 - 16343083-16344213,16344394-16345380,16345467-16345571
Length = 740
Score = 28.3 bits (60), Expect = 2.5
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 271 SGPQLSTGASRPNTPITSCTMHPSPPPANRXSGEYRRSGP 390
SGP++S +P+ PI T PS P SG ++R P
Sbjct: 176 SGPKVSKVVDKPSDPIPKPT--PSAGPKPLGSGPFKRFSP 213
>02_02_0041 +
6275636-6275749,6276659-6276695,6276927-6277036,
6277113-6277212,6277298-6277384,6277771-6278018,
6278178-6278231
Length = 249
Score = 28.3 bits (60), Expect = 2.5
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = -2
Query: 358 CSQAGGRDASYSW*WECSGGLHLWTAAGQTVRVTDSLSEVQI 233
CS +G D S EC L W+A QT RVT+S ++ I
Sbjct: 209 CSHSGAHDLQGS---ECE--LTTWSATKQTTRVTESATKQHI 245
>02_02_0550 -
11413912-11414079,11414338-11414513,11414617-11414629,
11414844-11414871,11415447-11415784
Length = 240
Score = 27.9 bits (59), Expect = 3.3
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 66 ATESVLAHWTASWPSAHLNLRCATLKLTA 152
+T+ + W W S+ LNL C T L+A
Sbjct: 61 STQILACRWRHIWRSSSLNLDCTTTSLSA 89
>10_02_0129 +
5584585-5584732,5586567-5586968,5587038-5587106,
5587181-5587234,5587309-5588214,5588313-5590283,
5590833-5591235,5591845-5591857
Length = 1321
Score = 27.5 bits (58), Expect = 4.4
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 243 SESESVTRTVWPA-AVHRCKPPEHSHHQLYDASLPPACEQ 359
S ++ +TR++ P+ A+ C EHS H ASL P Q
Sbjct: 30 SVAQGITRSIGPSKAMWICTAREHSRHVARYASLTPEQRQ 69
>04_03_0805 - 19850355-19850817,19851146-19851227,19852403-19852412
Length = 184
Score = 27.5 bits (58), Expect = 4.4
Identities = 13/31 (41%), Positives = 14/31 (45%), Gaps = 5/31 (16%)
Frame = +1
Query: 325 CTMHPSPPP-----ANRXSGEYRRSGPCHCH 402
C HP PPP A G S PCHC+
Sbjct: 128 CDCHPKPPPPAPAPAKPACGCPAWSSPCHCY 158
>04_03_0249 + 13462985-13463170,13463190-13463297
Length = 97
Score = 27.5 bits (58), Expect = 4.4
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = +3
Query: 90 WTASWPSAHLNLRCATLKLTAS 155
W +WP H+ RC ++++A+
Sbjct: 56 WAETWPQRHVRWRCGMVRVSAA 77
>03_05_0868 +
28385066-28385478,28386050-28386167,28386365-28386726,
28389308-28389406,28389485-28389890
Length = 465
Score = 27.5 bits (58), Expect = 4.4
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +1
Query: 181 SETVTTSLTMTSGYLMERSALRKASR*RVPSGPQLS 288
S + +LT+TS +L RS+L A R+P+GP LS
Sbjct: 3 SSSKLLALTLTSSFL--RSSLLPAPSRRLPTGPLLS 36
>02_05_1329 - 35724567-35725255,35725626-35725682,35727667-35729050
Length = 709
Score = 27.5 bits (58), Expect = 4.4
Identities = 11/38 (28%), Positives = 16/38 (42%)
Frame = +1
Query: 274 GPQLSTGASRPNTPITSCTMHPSPPPANRXSGEYRRSG 387
GP L + P P + P PPP + S + +G
Sbjct: 231 GPPLRIQCAAPTAPAAAAAFTPLPPPRSNRSRRAKNAG 268
>11_03_0027 + 9078792-9079613
Length = 273
Score = 27.1 bits (57), Expect = 5.8
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 271 SGPQLSTGASRPNTPITSCTMHPSPPP 351
S ++T AS PN+P+T + S PP
Sbjct: 54 SSSSVTTTASTPNSPVTPAPVTASSPP 80
>05_01_0245 -
1829921-1830359,1830449-1831002,1832016-1832144,
1832249-1832339,1832646-1832758,1832836-1833079,
1833193-1833281,1833357-1833424,1833790-1833874,
1834038-1834190
Length = 654
Score = 27.1 bits (57), Expect = 5.8
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = +1
Query: 304 PNTPITSCTMHPSPPPANR-XSGEYRRSGP 390
P P+ S HP PP + E++R+GP
Sbjct: 382 PEAPLASDMAHPPPPKTEKELVDEWKRAGP 411
>03_01_0200 - 1589768-1590023,1591134-1591264
Length = 128
Score = 27.1 bits (57), Expect = 5.8
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Frame = +2
Query: 272 LARSCPQVQAART---LPSPAVRCIPPPRLRTGLRG 370
LA + P ++A RT LP PAV +PP R LRG
Sbjct: 8 LASTLPLLRAVRTPRRLP-PAVSAVPPRAARVVLRG 42
>02_05_0687 - 30909791-30910293,30910440-30910503
Length = 188
Score = 27.1 bits (57), Expect = 5.8
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +2
Query: 257 GNAYRLARSCPQVQAARTLPSPAVRCIPPPRLR-TGLRGNIAA 382
G R + P++ A+ P P+ R +PP RL TG +I+A
Sbjct: 138 GEERRRSDRVPKIFYAKRPPYPSTRAVPPKRLSDTGWYRSISA 180
>02_04_0264 - 21393029-21393046,21394249-21394814,21395005-21395623
Length = 400
Score = 27.1 bits (57), Expect = 5.8
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +1
Query: 337 PSPPPANRXSGEYRRSG 387
PSPPPA + SG RR G
Sbjct: 23 PSPPPAAQLSGGVRRGG 39
>02_04_0099 - 19728053-19728589
Length = 178
Score = 27.1 bits (57), Expect = 5.8
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 248 KRVGNAYRLARSCPQVQAARTLPSPAVR 331
++VG A LAR C A +PSP V+
Sbjct: 131 EKVGEAIPLARQCDDAFAKAAVPSPLVQ 158
>11_06_0356 -
22654329-22654571,22654695-22654898,22655065-22655319,
22655435-22655626,22655738-22656046,22656149-22656355,
22656450-22656527,22657493-22657747,22657850-22658000,
22658269-22658500,22658631-22658886,22658960-22659091
Length = 837
Score = 26.6 bits (56), Expect = 7.7
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = +3
Query: 126 RCATLKLTASTWVNFRGLLGDGNNEPYDDFRLPNGKI 236
RC +T T V G G G P+D NGKI
Sbjct: 780 RCVVTSVTFVTNVRSYGPFGQGGGTPFDVPMQSNGKI 816
>10_07_0016 + 11826066-11826773
Length = 235
Score = 26.6 bits (56), Expect = 7.7
Identities = 21/59 (35%), Positives = 24/59 (40%)
Frame = +1
Query: 217 GYLMERSALRKASR*RVPSGPQLSTGASRPNTPITSCTMHPSPPPANRXSGEYRRSGPC 393
G+ ++ SA ASR R P P A R P PPPA R YR PC
Sbjct: 173 GFSLDASAAVLASRCRPPPTP-----ARRRPPPRPRLASRLRPPPARRRRSRYR---PC 223
>08_01_0064 +
444888-444959,445073-445277,445736-445901,446029-446251,
446982-447058,447370-447557,447845-447942,448202-448335,
448421-448555,448832-448960,449263-449632,449897-450018,
450155-450274,450396-450626,450706-450894,450978-451089,
451193-451438
Length = 938
Score = 26.6 bits (56), Expect = 7.7
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = -1
Query: 350 GGGEGCIVQLVMGVFGRLAPVDSCGPDGTRYRLAFRSADL 231
G GE V L G L+ D+C D R LAF +AD+
Sbjct: 791 GNGEDTNVSLC-GELNWLSSADTCEEDNFRRYLAFTTADV 829
>05_03_0458 + 14280953-14281866,14281964-14282912
Length = 620
Score = 26.6 bits (56), Expect = 7.7
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +1
Query: 181 SETVTTSLTMTSGYLMERSALRKASR*RVPSGPQLSTGASRPNTPIT-SCTMHPSPPP 351
+ T T+S T T + ++ +S P P L P P T SC+ HP+PPP
Sbjct: 37 NSTPTSSTTPTVPPSLTTTSSPSSSPSSPPPLPPLQP-TPPPLPPTTLSCSSHPTPPP 93
>03_05_0780 +
27646936-27647084,27647168-27647289,27649380-27649458,
27650346-27650427,27650483-27650600,27650695-27651050,
27651404-27652222,27652846-27653265,27653426-27653437
Length = 718
Score = 26.6 bits (56), Expect = 7.7
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = +1
Query: 268 PSGPQLSTGASRPNTPITSCTMHPSPPPANRXSGEYRRSGP 390
P+ P+L+ S P+ +C PPA + S R+ P
Sbjct: 325 PANPRLTHRCSTTTQPLPTCGTPAPAPPAGQPSSAEDRATP 365
>02_02_0097 -
6746934-6747005,6747372-6748325,6748421-6748435,
6748592-6748984
Length = 477
Score = 26.6 bits (56), Expect = 7.7
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +1
Query: 193 TTSLTMTSGYLMERSALRKASR*RVPSGPQLSTGASRPNTPITSCTMHPSPP 348
+TSL T +M S+ + R Q++T + TP +S +HP PP
Sbjct: 215 STSLLRTMTPMMASSSATPSPR---ELAAQVATTTTTTTTPSSSSRLHPRPP 263
>01_06_1377 + 36764461-36765339
Length = 292
Score = 26.6 bits (56), Expect = 7.7
Identities = 23/72 (31%), Positives = 30/72 (41%), Gaps = 3/72 (4%)
Frame = +1
Query: 181 SETVTTSLTMTSGYLMERSALRKASR*RVPSGP--QLSTGASRPNT-PITSCTMHPSPPP 351
S +T L SG + +R A R R P P Q +S P P + +PPP
Sbjct: 126 SALITLPLLRPSGRPQGKLRIRLALRERSPPPPEPQYPPPSSSPYYFPPPPPPAYSAPPP 185
Query: 352 ANRXSGEYRRSG 387
S +Y RSG
Sbjct: 186 PQYGSEQYYRSG 197
>01_01_0791 -
6138751-6138894,6139032-6139167,6139573-6139766,
6139848-6139964,6140062-6140469
Length = 332
Score = 26.6 bits (56), Expect = 7.7
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 268 PSGPQLSTGASRPNTPITSCTMHPSPPPANR 360
P P +STG S +T+ HP+ PP+N+
Sbjct: 132 PPSPMVSTGLS-----LTASARHPTEPPSNQ 157
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,460,607
Number of Sequences: 37544
Number of extensions: 311331
Number of successful extensions: 1410
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1326
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1402
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 730630428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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