Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20329
(410 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 25 1.4
AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubu... 25 1.4
Y17688-1|CAA76813.1| 153|Anopheles gambiae gSG1 protein protein. 24 2.5
AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein. 24 2.5
AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein. 24 2.5
AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein. 24 2.5
AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein. 24 2.5
AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein. 24 2.5
AY344830-1|AAR05801.1| 334|Anopheles gambiae ICHIT protein. 24 2.5
AY344829-1|AAR05800.1| 334|Anopheles gambiae ICHIT protein. 24 2.5
AJ130949-1|CAA10258.1| 401|Anopheles gambiae SG1 protein protein. 24 2.5
AJ010903-1|CAA09389.1| 373|Anopheles gambiae ICHIT protein prot... 23 3.3
AF080563-1|AAC31943.1| 310|Anopheles gambiae Ultrabithorax home... 23 3.3
AF080562-1|AAC31942.1| 327|Anopheles gambiae Ultrabithorax home... 23 3.3
AB090820-1|BAC57915.1| 527|Anopheles gambiae gag-like protein p... 23 5.7
AY578799-1|AAT07304.1| 679|Anopheles gambiae brinker protein. 22 7.6
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 24.6 bits (51), Expect = 1.4
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +1
Query: 292 GASRPNTPITSCTMHPSPPPANRXS 366
GA T S + HPSP PA R S
Sbjct: 728 GAPLALTSSKSASTHPSPHPATRAS 752
>AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubule
binding protein protein.
Length = 838
Score = 24.6 bits (51), Expect = 1.4
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 277 PQLSTGASRPNTPITSCTMHPSPPPANRXSGEYR 378
PQ S P++ +T+ PS PP R + E R
Sbjct: 86 PQPSLAPVVPSSVVTAPPARPSQPPTTRFAPEPR 119
Score = 22.6 bits (46), Expect = 5.7
Identities = 9/28 (32%), Positives = 11/28 (39%)
Frame = +1
Query: 265 VPSGPQLSTGASRPNTPITSCTMHPSPP 348
+P GPQ+ P T P PP
Sbjct: 185 MPPGPQMMRPPGNVGPPRTGTPTQPQPP 212
>Y17688-1|CAA76813.1| 153|Anopheles gambiae gSG1 protein protein.
Length = 153
Score = 23.8 bits (49), Expect = 2.5
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -1
Query: 344 GEGCIVQLVMGVFGRL 297
GE C++QLV G+ RL
Sbjct: 18 GEQCVIQLVRGMVTRL 33
>AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 23.8 bits (49), Expect = 2.5
Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 5/43 (11%)
Frame = -2
Query: 406 SHDNDRVLSGDIP-----PKXCSQAGGRDASYSW*WECSGGLH 293
+H N + G +P P CS+ +W +EC GLH
Sbjct: 30 NHPNCPEMQGPLPHYFIHPTNCSRFYECHMKDAWEYECPAGLH 72
>AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 23.8 bits (49), Expect = 2.5
Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 5/43 (11%)
Frame = -2
Query: 406 SHDNDRVLSGDIP-----PKXCSQAGGRDASYSW*WECSGGLH 293
+H N + G +P P CS+ +W +EC GLH
Sbjct: 30 NHPNCPEMQGPLPHYFIHPTNCSRFYECHMKDAWEYECPAGLH 72
>AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 23.8 bits (49), Expect = 2.5
Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 5/43 (11%)
Frame = -2
Query: 406 SHDNDRVLSGDIP-----PKXCSQAGGRDASYSW*WECSGGLH 293
+H N + G +P P CS+ +W +EC GLH
Sbjct: 30 NHPNCPEMQGPLPHYFIHPTNCSRFYECHMKDAWEYECPAGLH 72
>AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 23.8 bits (49), Expect = 2.5
Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 5/43 (11%)
Frame = -2
Query: 406 SHDNDRVLSGDIP-----PKXCSQAGGRDASYSW*WECSGGLH 293
+H N + G +P P CS+ +W +EC GLH
Sbjct: 30 NHPNCPEMQGPLPHYFIHPTNCSRFYECHMKDAWEYECPAGLH 72
>AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 23.8 bits (49), Expect = 2.5
Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 5/43 (11%)
Frame = -2
Query: 406 SHDNDRVLSGDIP-----PKXCSQAGGRDASYSW*WECSGGLH 293
+H N + G +P P CS+ +W +EC GLH
Sbjct: 30 NHPNCPEMQGPLPHYFIHPTNCSRFYECHMKDAWEYECPAGLH 72
>AY344830-1|AAR05801.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 23.8 bits (49), Expect = 2.5
Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 5/43 (11%)
Frame = -2
Query: 406 SHDNDRVLSGDIP-----PKXCSQAGGRDASYSW*WECSGGLH 293
+H N + G +P P CS+ +W +EC GLH
Sbjct: 30 NHPNCPEMQGPLPHYFIHPTNCSRFYECHMKDAWEYECPAGLH 72
>AY344829-1|AAR05800.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 23.8 bits (49), Expect = 2.5
Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 5/43 (11%)
Frame = -2
Query: 406 SHDNDRVLSGDIP-----PKXCSQAGGRDASYSW*WECSGGLH 293
+H N + G +P P CS+ +W +EC GLH
Sbjct: 30 NHPNCPEMQGPLPHYFIHPTNCSRFYECHMKDAWEYECPAGLH 72
>AJ130949-1|CAA10258.1| 401|Anopheles gambiae SG1 protein protein.
Length = 401
Score = 23.8 bits (49), Expect = 2.5
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -1
Query: 344 GEGCIVQLVMGVFGRL 297
GE C++QLV G+ RL
Sbjct: 18 GEQCVIQLVRGMVTRL 33
>AJ010903-1|CAA09389.1| 373|Anopheles gambiae ICHIT protein
protein.
Length = 373
Score = 23.4 bits (48), Expect = 3.3
Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 5/43 (11%)
Frame = -2
Query: 406 SHDNDRVLSGDIP-----PKXCSQAGGRDASYSW*WECSGGLH 293
+H N + G +P P CS+ +W +EC GLH
Sbjct: 30 NHPNCPEMQGPLPHYFIHPTNCSRFYECHMRDAWEYECPAGLH 72
>AF080563-1|AAC31943.1| 310|Anopheles gambiae Ultrabithorax
homeotic protein IVa protein.
Length = 310
Score = 23.4 bits (48), Expect = 3.3
Identities = 10/32 (31%), Positives = 14/32 (43%)
Frame = +3
Query: 276 PAAVHRCKPPEHSHHQLYDASLPPACEQXFGG 371
P H + YDAS+ AC+Q + G
Sbjct: 51 PYTNHHLHQTRTAQESPYDASIQAACKQIYEG 82
>AF080562-1|AAC31942.1| 327|Anopheles gambiae Ultrabithorax
homeotic protein IIa protein.
Length = 327
Score = 23.4 bits (48), Expect = 3.3
Identities = 10/32 (31%), Positives = 14/32 (43%)
Frame = +3
Query: 276 PAAVHRCKPPEHSHHQLYDASLPPACEQXFGG 371
P H + YDAS+ AC+Q + G
Sbjct: 51 PYTNHHLHQTRTAQESPYDASIQAACKQIYEG 82
>AB090820-1|BAC57915.1| 527|Anopheles gambiae gag-like protein
protein.
Length = 527
Score = 22.6 bits (46), Expect = 5.7
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = +1
Query: 223 LMERSALRKASR*RVPSGPQLSTGASRPNTPITSCTMHPSPPPANRXSGEYRRSGPC 393
L ER + K +R R+P R T C++H +P + SG+ R C
Sbjct: 417 LWERRDMTKRARVRLPRAEAELVKDRRLELGYTYCSVHEAP----KVSGQLTRCFRC 469
>AY578799-1|AAT07304.1| 679|Anopheles gambiae brinker protein.
Length = 679
Score = 22.2 bits (45), Expect = 7.6
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 265 VPSGPQLSTGASRPNTPITSCTMHPSPPPANRXSGE 372
V S LST +S + + ++ P+ PPA+ +GE
Sbjct: 235 VSSCSPLSTASSASCSSSAAGSLCPTSPPASVSNGE 270
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 482,438
Number of Sequences: 2352
Number of extensions: 9853
Number of successful extensions: 27
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 33349914
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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