Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20329
(410 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ242548-1|CAB85604.1| 930|Homo sapiens sv8-MUC4 apomucin protein. 39 0.007
AJ430032-1|CAD22550.1| 1156|Homo sapiens mucin 4 protein. 35 0.091
AJ242550-1|CAB85606.1| 1125|Homo sapiens MUC4/X apomucin protein. 35 0.091
AJ242549-1|CAB85605.1| 1176|Homo sapiens MUC4/Y apomucin protein. 35 0.091
AJ242547-1|CAB85603.1| 814|Homo sapiens sv7-MUC4 apomucin protein. 35 0.091
AJ010901-1|CAB38059.1| 1156|Homo sapiens MUC4 protein. 35 0.091
AJ400858-1|CAC14143.1| 2167|Homo sapiens MUC4 protein splice var... 35 0.12
AJ400857-1|CAC14142.1| 1827|Homo sapiens MUC4 protein splice var... 35 0.12
AJ277412-1|CAC10061.1| 2117|Homo sapiens mucin 4, variant V3 pro... 35 0.12
AJ276359-1|CAB81773.1| 2169|Homo sapiens mucin 4 protein. 35 0.12
AF522055-1|AAM66747.1| 2169|Homo sapiens MUC4 protein. 35 0.12
U85962-1|AAC51331.2| 2442|Homo sapiens CREB-binding protein prot... 32 0.85
U47741-1|AAC51770.1| 2442|Homo sapiens CREB-binding protein prot... 32 0.85
AB210043-1|BAE06125.1| 2472|Homo sapiens CREBBP variant protein ... 32 0.85
BC047720-1|AAH47720.1| 512|Homo sapiens LOXHD1 protein protein. 31 1.5
BC041860-1|AAH41860.1| 1114|Homo sapiens LOXHD1 protein protein. 31 1.5
AK057232-1|BAB71390.1| 457|Homo sapiens protein ( Homo sapiens ... 31 1.5
Z92546-1|CAB62953.1| 822|Homo sapiens bK65A6.2 (novel Sushi dom... 30 2.6
BC033107-1|AAH33107.1| 822|Homo sapiens sushi domain containing... 30 2.6
AK026431-1|BAB15481.1| 619|Homo sapiens protein ( Homo sapiens ... 30 2.6
AF233450-1|AAK82958.1| 2341|Homo sapiens pecanex-like protein 1 ... 30 2.6
AB023212-1|BAA76839.1| 1014|Homo sapiens KIAA0995 protein protein. 30 2.6
D84239-1|BAA19526.1| 5405|Homo sapiens IgG Fc binding protein pr... 29 4.5
AY166864-1|AAO39152.1| 348|Homo sapiens truncated alpha-1,4-gal... 29 4.5
AC007842-1|AAD39266.1| 2843|Homo sapiens Human Fc gamma BP [AA 1... 29 4.5
X07871-1|CAA30721.1| 351|Homo sapiens T-cell surface antigen pr... 29 6.0
M19806-1|AAA53095.1| 351|Homo sapiens T11 surface antigen protein. 29 6.0
M16445-1|AAA51738.1| 351|Homo sapiens CD2 protein. 29 6.0
M16336-1|AAA51946.1| 360|Homo sapiens CD2 protein. 29 6.0
M14362-1|AAA35571.1| 351|Homo sapiens protein ( Human T-cell su... 29 6.0
BC033583-1|AAH33583.1| 351|Homo sapiens CD2 molecule protein. 29 6.0
AL135798-2|CAC14840.1| 351|Homo sapiens CD2 molecule protein. 29 6.0
AK223393-1|BAD97113.1| 351|Homo sapiens CD2 antigen (p50), shee... 29 6.0
AJ238464-1|CAB57269.1| 424|Homo sapiens corneodesmosin protein. 29 6.0
AF224748-1|AAF78560.1| 500|Homo sapiens corneodesmosin protein. 29 6.0
U95299-1|AAC32288.1| 2003|Homo sapiens Notch4 protein. 29 7.9
U89335-1|AAC63097.1| 1999|Homo sapiens notch4 protein. 29 7.9
D86566-1|BAA13116.1| 955|Homo sapiens notch related protein pro... 29 7.9
BX284927-1|CAM25850.1| 2003|Homo sapiens Notch homolog 4 (Drosop... 29 7.9
BX284686-1|CAM26209.1| 2003|Homo sapiens Notch homolog 4 (Drosop... 29 7.9
BC111364-1|AAI11365.1| 142|Homo sapiens Unknown (protein for MG... 29 7.9
AL845509-1|CAI18564.1| 2003|Homo sapiens Notch homolog 4 (Drosop... 29 7.9
AL845464-12|CAI41803.1| 2003|Homo sapiens Notch homolog 4 (Droso... 29 7.9
AL713999-31|CAI95100.1| 774|Homo sapiens hyperpolarization acti... 29 7.9
AL662884-27|CAI18362.1| 2003|Homo sapiens Notch homolog 4 (Droso... 29 7.9
AL662830-9|CAI17543.1| 2005|Homo sapiens Notch homolog 4 (Drosop... 29 7.9
AF488550-1|AAO49470.1| 774|Homo sapiens hyperpolarization activ... 29 7.9
AF312387-1|AAG48615.1| 232|Homo sapiens AML1/AMP19 fusion prote... 29 7.9
>AJ242548-1|CAB85604.1| 930|Homo sapiens sv8-MUC4 apomucin protein.
Length = 930
Score = 38.7 bits (86), Expect = 0.007
Identities = 19/44 (43%), Positives = 21/44 (47%)
Frame = +3
Query: 99 SWPSAHLNLRCATLKLTASTWVNFRGLLGDGNNEPYDDFRLPNG 230
SW +LR L GLLG NN P DDFR+PNG
Sbjct: 328 SWQQGRRDLRFQPASLPPEYQNRTEGLLGVWNNNPEDDFRMPNG 371
>AJ430032-1|CAD22550.1| 1156|Homo sapiens mucin 4 protein.
Length = 1156
Score = 35.1 bits (77), Expect = 0.091
Identities = 19/47 (40%), Positives = 22/47 (46%)
Frame = +3
Query: 90 WTASWPSAHLNLRCATLKLTASTWVNFRGLLGDGNNEPYDDFRLPNG 230
W A N+ A+ L GLLG NN P DDFR+PNG
Sbjct: 551 WATVSVIALSNILHASASLPPEYQNRTEGLLGVWNNNPEDDFRMPNG 597
>AJ242550-1|CAB85606.1| 1125|Homo sapiens MUC4/X apomucin protein.
Length = 1125
Score = 35.1 bits (77), Expect = 0.091
Identities = 19/47 (40%), Positives = 22/47 (46%)
Frame = +3
Query: 90 WTASWPSAHLNLRCATLKLTASTWVNFRGLLGDGNNEPYDDFRLPNG 230
W A N+ A+ L GLLG NN P DDFR+PNG
Sbjct: 520 WATVSVIALSNILHASASLPPEYQNRTEGLLGVWNNNPEDDFRMPNG 566
>AJ242549-1|CAB85605.1| 1176|Homo sapiens MUC4/Y apomucin protein.
Length = 1176
Score = 35.1 bits (77), Expect = 0.091
Identities = 19/47 (40%), Positives = 22/47 (46%)
Frame = +3
Query: 90 WTASWPSAHLNLRCATLKLTASTWVNFRGLLGDGNNEPYDDFRLPNG 230
W A N+ A+ L GLLG NN P DDFR+PNG
Sbjct: 571 WATVSVIALSNILHASASLPPEYQNRTEGLLGVWNNNPEDDFRMPNG 617
>AJ242547-1|CAB85603.1| 814|Homo sapiens sv7-MUC4 apomucin protein.
Length = 814
Score = 35.1 bits (77), Expect = 0.091
Identities = 19/47 (40%), Positives = 22/47 (46%)
Frame = +3
Query: 90 WTASWPSAHLNLRCATLKLTASTWVNFRGLLGDGNNEPYDDFRLPNG 230
W A N+ A+ L GLLG NN P DDFR+PNG
Sbjct: 551 WATVSVIALSNILHASASLPPEYQNRTEGLLGVWNNNPEDDFRMPNG 597
>AJ010901-1|CAB38059.1| 1156|Homo sapiens MUC4 protein.
Length = 1156
Score = 35.1 bits (77), Expect = 0.091
Identities = 19/47 (40%), Positives = 22/47 (46%)
Frame = +3
Query: 90 WTASWPSAHLNLRCATLKLTASTWVNFRGLLGDGNNEPYDDFRLPNG 230
W A N+ A+ L GLLG NN P DDFR+PNG
Sbjct: 551 WATVSVIALSNILHASASLPPEYQNRTEGLLGVWNNNPEDDFRMPNG 597
>AJ400858-1|CAC14143.1| 2167|Homo sapiens MUC4 protein splice variant
sv21 protein.
Length = 2167
Score = 34.7 bits (76), Expect = 0.12
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = +3
Query: 174 GLLGDGNNEPYDDFRLPNG 230
GLLG NN P DDFR+PNG
Sbjct: 1592 GLLGVWNNNPEDDFRMPNG 1610
>AJ400857-1|CAC14142.1| 1827|Homo sapiens MUC4 protein splice variant
sv20 protein.
Length = 1827
Score = 34.7 bits (76), Expect = 0.12
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = +3
Query: 174 GLLGDGNNEPYDDFRLPNG 230
GLLG NN P DDFR+PNG
Sbjct: 1592 GLLGVWNNNPEDDFRMPNG 1610
>AJ277412-1|CAC10061.1| 2117|Homo sapiens mucin 4, variant V3 protein.
Length = 2117
Score = 34.7 bits (76), Expect = 0.12
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = +3
Query: 174 GLLGDGNNEPYDDFRLPNG 230
GLLG NN P DDFR+PNG
Sbjct: 1540 GLLGVWNNNPEDDFRMPNG 1558
>AJ276359-1|CAB81773.1| 2169|Homo sapiens mucin 4 protein.
Length = 2169
Score = 34.7 bits (76), Expect = 0.12
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = +3
Query: 174 GLLGDGNNEPYDDFRLPNG 230
GLLG NN P DDFR+PNG
Sbjct: 1592 GLLGVWNNNPEDDFRMPNG 1610
>AF522055-1|AAM66747.1| 2169|Homo sapiens MUC4 protein.
Length = 2169
Score = 34.7 bits (76), Expect = 0.12
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = +3
Query: 174 GLLGDGNNEPYDDFRLPNG 230
GLLG NN P DDFR+PNG
Sbjct: 1592 GLLGVWNNNPEDDFRMPNG 1610
>U85962-1|AAC51331.2| 2442|Homo sapiens CREB-binding protein
protein.
Length = 2442
Score = 31.9 bits (69), Expect = 0.85
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1
Query: 274 GPQLSTGASRPNTPITSCTMHPSPPPANRXSG 369
GPQ S P P+T +HP+PPPA+ +G
Sbjct: 837 GPQAS---QLPCPPVTQSPLHPTPPPASTAAG 865
>U47741-1|AAC51770.1| 2442|Homo sapiens CREB-binding protein
protein.
Length = 2442
Score = 31.9 bits (69), Expect = 0.85
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1
Query: 274 GPQLSTGASRPNTPITSCTMHPSPPPANRXSG 369
GPQ S P P+T +HP+PPPA+ +G
Sbjct: 837 GPQAS---QLPCPPVTQSPLHPTPPPASTAAG 865
>AB210043-1|BAE06125.1| 2472|Homo sapiens CREBBP variant protein
protein.
Length = 2472
Score = 31.9 bits (69), Expect = 0.85
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1
Query: 274 GPQLSTGASRPNTPITSCTMHPSPPPANRXSG 369
GPQ S P P+T +HP+PPPA+ +G
Sbjct: 867 GPQAS---QLPCPPVTQSPLHPTPPPASTAAG 895
>BC047720-1|AAH47720.1| 512|Homo sapiens LOXHD1 protein protein.
Length = 512
Score = 31.1 bits (67), Expect = 1.5
Identities = 20/84 (23%), Positives = 30/84 (35%)
Frame = +3
Query: 21 DSRSSKRMCSLSVNQATESVLAHWTASWPSAHLNLRCATLKLTASTWVNFRGLLGDGNNE 200
D S +C L V + + W S+ N R T W++ +G+ +
Sbjct: 181 DMLSLGHLCKLRVWHDNKGIFPGWHLSYVDVKDNSRDETFHFQCDCWLS----KSEGDGQ 236
Query: 201 PYDDFRLPNGKICTSESESVTRTV 272
DF N KIC E+ V
Sbjct: 237 TVRDFACANNKICDELEETTYEIV 260
>BC041860-1|AAH41860.1| 1114|Homo sapiens LOXHD1 protein protein.
Length = 1114
Score = 31.1 bits (67), Expect = 1.5
Identities = 20/84 (23%), Positives = 30/84 (35%)
Frame = +3
Query: 21 DSRSSKRMCSLSVNQATESVLAHWTASWPSAHLNLRCATLKLTASTWVNFRGLLGDGNNE 200
D S +C L V + + W S+ N R T W++ +G+ +
Sbjct: 831 DMLSLGHLCKLRVWHDNKGIFPGWHLSYVDVKDNSRDETFHFQCDCWLS----KSEGDGQ 886
Query: 201 PYDDFRLPNGKICTSESESVTRTV 272
DF N KIC E+ V
Sbjct: 887 TVRDFACANNKICDELEETTYEIV 910
>AK057232-1|BAB71390.1| 457|Homo sapiens protein ( Homo sapiens
cDNA FLJ32670 fis, clone TESTI1000127, weakly similar to
POLYCYSTIN PRECURSOR. ).
Length = 457
Score = 31.1 bits (67), Expect = 1.5
Identities = 20/84 (23%), Positives = 30/84 (35%)
Frame = +3
Query: 21 DSRSSKRMCSLSVNQATESVLAHWTASWPSAHLNLRCATLKLTASTWVNFRGLLGDGNNE 200
D S +C L V + + W S+ N R T W++ +G+ +
Sbjct: 181 DMLSLGHLCKLRVWHDNKGIFPGWHLSYVDVKDNSRDETFHFQCDCWLS----KSEGDGQ 236
Query: 201 PYDDFRLPNGKICTSESESVTRTV 272
DF N KIC E+ V
Sbjct: 237 TVRDFACANNKICDELEETTYEIV 260
>Z92546-1|CAB62953.1| 822|Homo sapiens bK65A6.2 (novel Sushi domain
(SCR repeat) containing protein similar to Mucins)
protein.
Length = 822
Score = 30.3 bits (65), Expect = 2.6
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +3
Query: 174 GLLGDGNNEPYDDFRLPNGKI 236
GLLG NN+P DDF L +G++
Sbjct: 594 GLLGTLNNDPTDDFTLHSGRV 614
>BC033107-1|AAH33107.1| 822|Homo sapiens sushi domain containing 2
protein.
Length = 822
Score = 30.3 bits (65), Expect = 2.6
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +3
Query: 174 GLLGDGNNEPYDDFRLPNGKI 236
GLLG NN+P DDF L +G++
Sbjct: 594 GLLGTLNNDPTDDFTLHSGRV 614
>AK026431-1|BAB15481.1| 619|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22778 fis, clone KAIA1714. ).
Length = 619
Score = 30.3 bits (65), Expect = 2.6
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +3
Query: 174 GLLGDGNNEPYDDFRLPNGKI 236
GLLG NN+P DDF L +G++
Sbjct: 391 GLLGTLNNDPTDDFTLHSGRV 411
>AF233450-1|AAK82958.1| 2341|Homo sapiens pecanex-like protein 1
protein.
Length = 2341
Score = 30.3 bits (65), Expect = 2.6
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +3
Query: 303 PEHSHHQLYDASLPPACEQXFGGISPLRTLSLSWD 407
P H+HH D SL AC+ + PL + S D
Sbjct: 243 PSHNHHHHVDQSLSSACDTEVASLVPLHSHSYRKD 277
>AB023212-1|BAA76839.1| 1014|Homo sapiens KIAA0995 protein protein.
Length = 1014
Score = 30.3 bits (65), Expect = 2.6
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +3
Query: 303 PEHSHHQLYDASLPPACEQXFGGISPLRTLSLSWD 407
P H+HH D SL AC+ + PL + S D
Sbjct: 391 PSHNHHHHVDQSLSSACDTEVASLVPLHSHSYRKD 425
>D84239-1|BAA19526.1| 5405|Homo sapiens IgG Fc binding protein
protein.
Length = 5405
Score = 29.5 bits (63), Expect = 4.5
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 174 GLLGDGNNEPYDDFRLPNGKICTSESE 254
GL G+ N +P DDF+ PNG + +E
Sbjct: 1388 GLCGNYNGDPKDDFQKPNGSQAGNANE 1414
Score = 29.5 bits (63), Expect = 4.5
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 174 GLLGDGNNEPYDDFRLPNGKICTSESE 254
GL G+ N +P DDF+ PNG + +E
Sbjct: 2589 GLCGNYNGDPKDDFQKPNGSQAGNANE 2615
Score = 29.5 bits (63), Expect = 4.5
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 174 GLLGDGNNEPYDDFRLPNGKICTSESE 254
GL G+ N +P DDF+ PNG + +E
Sbjct: 3790 GLCGNYNGDPKDDFQKPNGSQAGNANE 3816
>AY166864-1|AAO39152.1| 348|Homo sapiens truncated
alpha-1,4-galactosyltransferase protein.
Length = 348
Score = 29.5 bits (63), Expect = 4.5
Identities = 26/75 (34%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Frame = +1
Query: 187 TVTTSLTMTSGYLMERSALRKASR*RVPSG--PQLSTGASRPNTPITSCTMHPSPPPANR 360
T T+ T SG RS R +SR VPS P+ + A+ P P+ T PSP R
Sbjct: 236 TSWTTTTAGSGVTRARSCSRGSSRSGVPSAAWPRAAPAAASPPCPLRPST--PSPGRTGR 293
Query: 361 XSGEYRRSGPCHCHG 405
+ R S C G
Sbjct: 294 ST--LRTSTRRSCRG 306
>AC007842-1|AAD39266.1| 2843|Homo sapiens Human Fc gamma BP [AA
1-2843] protein.
Length = 2843
Score = 29.5 bits (63), Expect = 4.5
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 174 GLLGDGNNEPYDDFRLPNGKICTSESE 254
GL G+ N +P DDF+ PNG + +E
Sbjct: 1388 GLCGNYNGDPKDDFQKPNGSQAGNANE 1414
Score = 29.5 bits (63), Expect = 4.5
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 174 GLLGDGNNEPYDDFRLPNGKICTSESE 254
GL G+ N +P DDF+ PNG + +E
Sbjct: 2589 GLCGNYNGDPKDDFQKPNGSQAGNANE 2615
>X07871-1|CAA30721.1| 351|Homo sapiens T-cell surface antigen
protein.
Length = 351
Score = 29.1 bits (62), Expect = 6.0
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +1
Query: 295 ASRPNTPITSCTMHPSPPPANRXSGEYRRSGP 390
AS P P TS HP PPP +R R P
Sbjct: 270 ASTPQNPATS--QHPPPPPGHRSQAPSHRPPP 299
>M19806-1|AAA53095.1| 351|Homo sapiens T11 surface antigen protein.
Length = 351
Score = 29.1 bits (62), Expect = 6.0
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +1
Query: 295 ASRPNTPITSCTMHPSPPPANRXSGEYRRSGP 390
AS P P TS HP PPP +R R P
Sbjct: 270 ASTPQNPATS--QHPPPPPGHRSQAPSHRPPP 299
>M16445-1|AAA51738.1| 351|Homo sapiens CD2 protein.
Length = 351
Score = 29.1 bits (62), Expect = 6.0
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +1
Query: 295 ASRPNTPITSCTMHPSPPPANRXSGEYRRSGP 390
AS P P TS HP PPP +R R P
Sbjct: 270 ASTPQNPATS--QHPPPPPGHRSQAPSHRPPP 299
>M16336-1|AAA51946.1| 360|Homo sapiens CD2 protein.
Length = 360
Score = 29.1 bits (62), Expect = 6.0
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +1
Query: 295 ASRPNTPITSCTMHPSPPPANRXSGEYRRSGP 390
AS P P TS HP PPP +R R P
Sbjct: 270 ASTPQNPATS--QHPPPPPGHRSQAPSHRPPP 299
>M14362-1|AAA35571.1| 351|Homo sapiens protein ( Human T-cell
surface antigen CD2 (T11) mRNA, complete cds. ).
Length = 351
Score = 29.1 bits (62), Expect = 6.0
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +1
Query: 295 ASRPNTPITSCTMHPSPPPANRXSGEYRRSGP 390
AS P P TS HP PPP +R R P
Sbjct: 270 ASTPQNPATS--QHPPPPPGHRSQAPSHRPPP 299
>BC033583-1|AAH33583.1| 351|Homo sapiens CD2 molecule protein.
Length = 351
Score = 29.1 bits (62), Expect = 6.0
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +1
Query: 295 ASRPNTPITSCTMHPSPPPANRXSGEYRRSGP 390
AS P P TS HP PPP +R R P
Sbjct: 270 ASTPQNPATS--QHPPPPPGHRSQAPSHRPPP 299
>AL135798-2|CAC14840.1| 351|Homo sapiens CD2 molecule protein.
Length = 351
Score = 29.1 bits (62), Expect = 6.0
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +1
Query: 295 ASRPNTPITSCTMHPSPPPANRXSGEYRRSGP 390
AS P P TS HP PPP +R R P
Sbjct: 270 ASTPQNPATS--QHPPPPPGHRSQAPSHRPPP 299
>AK223393-1|BAD97113.1| 351|Homo sapiens CD2 antigen (p50), sheep
red blood cell receptor variant protein.
Length = 351
Score = 29.1 bits (62), Expect = 6.0
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +1
Query: 295 ASRPNTPITSCTMHPSPPPANRXSGEYRRSGP 390
AS P P TS HP PPP +R R P
Sbjct: 270 ASTPQNPATS--QHPPPPPGHRSQAPSHRPPP 299
>AJ238464-1|CAB57269.1| 424|Homo sapiens corneodesmosin protein.
Length = 424
Score = 29.1 bits (62), Expect = 6.0
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 262 RVPSGPQLSTGASRPNTPITSCTMHPSPPP 351
RVPSG +S+ + P P S + P PP
Sbjct: 292 RVPSGSSISSSSGSPYHPCGSASQSPCSPP 321
>AF224748-1|AAF78560.1| 500|Homo sapiens corneodesmosin protein.
Length = 500
Score = 29.1 bits (62), Expect = 6.0
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 262 RVPSGPQLSTGASRPNTPITSCTMHPSPPP 351
RVPSG +S+ + P P S + P PP
Sbjct: 368 RVPSGSSISSSSGSPYHPCGSASQSPCSPP 397
>U95299-1|AAC32288.1| 2003|Homo sapiens Notch4 protein.
Length = 2003
Score = 28.7 bits (61), Expect = 7.9
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +1
Query: 271 SGPQLSTGASRPNTPITSCTMHPS-PPPANRXSGEYRRSGPCHCHGT 408
SGP L+ G+ P+ CT PS P + S +Y S PC GT
Sbjct: 735 SGPCLNGGSCNPSPGGYYCTCPPSHTGPQCQTSTDYCVSAPCFNGGT 781
>U89335-1|AAC63097.1| 1999|Homo sapiens notch4 protein.
Length = 1999
Score = 28.7 bits (61), Expect = 7.9
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +1
Query: 271 SGPQLSTGASRPNTPITSCTMHPS-PPPANRXSGEYRRSGPCHCHGT 408
SGP L+ G+ P+ CT PS P + S +Y S PC GT
Sbjct: 734 SGPCLNGGSCNPSPGGYYCTCPPSHTGPQCQTSTDYCVSAPCFNGGT 780
>D86566-1|BAA13116.1| 955|Homo sapiens notch related protein
protein.
Length = 955
Score = 28.7 bits (61), Expect = 7.9
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +1
Query: 271 SGPQLSTGASRPNTPITSCTMHPS-PPPANRXSGEYRRSGPCHCHGT 408
SGP L+ G+ P+ CT PS P + S +Y S PC GT
Sbjct: 735 SGPCLNGGSCNPSPGGYYCTCPPSHTGPQCQTSTDYCVSAPCFNGGT 781
>BX284927-1|CAM25850.1| 2003|Homo sapiens Notch homolog 4
(Drosophila) protein.
Length = 2003
Score = 28.7 bits (61), Expect = 7.9
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +1
Query: 271 SGPQLSTGASRPNTPITSCTMHPS-PPPANRXSGEYRRSGPCHCHGT 408
SGP L+ G+ P+ CT PS P + S +Y S PC GT
Sbjct: 735 SGPCLNGGSCNPSPGGYYCTCPPSHTGPQCQTSTDYCVSAPCFNGGT 781
>BX284686-1|CAM26209.1| 2003|Homo sapiens Notch homolog 4
(Drosophila) protein.
Length = 2003
Score = 28.7 bits (61), Expect = 7.9
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +1
Query: 271 SGPQLSTGASRPNTPITSCTMHPS-PPPANRXSGEYRRSGPCHCHGT 408
SGP L+ G+ P+ CT PS P + S +Y S PC GT
Sbjct: 735 SGPCLNGGSCNPSPGGYYCTCPPSHTGPQCQTSTDYCVSAPCFNGGT 781
>BC111364-1|AAI11365.1| 142|Homo sapiens Unknown (protein for
MGC:131493) protein.
Length = 142
Score = 28.7 bits (61), Expect = 7.9
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +1
Query: 286 STGASRPNTPITSCTMHPSPPPANRXSGEYRRSGP 390
+ GAS TP +PPPA SG +SGP
Sbjct: 8 AAGASEGATPGLEAVPPVAPPPATAASGPIPKSGP 42
>AL845509-1|CAI18564.1| 2003|Homo sapiens Notch homolog 4
(Drosophila) protein.
Length = 2003
Score = 28.7 bits (61), Expect = 7.9
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +1
Query: 271 SGPQLSTGASRPNTPITSCTMHPS-PPPANRXSGEYRRSGPCHCHGT 408
SGP L+ G+ P+ CT PS P + S +Y S PC GT
Sbjct: 735 SGPCLNGGSCNPSPGGYYCTCPPSHTGPQCQTSTDYCVSAPCFNGGT 781
>AL845464-12|CAI41803.1| 2003|Homo sapiens Notch homolog 4
(Drosophila) protein.
Length = 2003
Score = 28.7 bits (61), Expect = 7.9
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +1
Query: 271 SGPQLSTGASRPNTPITSCTMHPS-PPPANRXSGEYRRSGPCHCHGT 408
SGP L+ G+ P+ CT PS P + S +Y S PC GT
Sbjct: 735 SGPCLNGGSCNPSPGGYYCTCPPSHTGPQCQTSTDYCVSAPCFNGGT 781
>AL713999-31|CAI95100.1| 774|Homo sapiens hyperpolarization
activated cyclic nucleotide-gated potassium channel 3
protein.
Length = 774
Score = 28.7 bits (61), Expect = 7.9
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +1
Query: 286 STGASRPNTPITSCTMHPSPPPANRXSGEYRRSGP 390
+ GAS TP +PPPA SG +SGP
Sbjct: 8 AAGASEGATPGLEAVPPVAPPPATAASGPIPKSGP 42
>AL662884-27|CAI18362.1| 2003|Homo sapiens Notch homolog 4
(Drosophila) protein.
Length = 2003
Score = 28.7 bits (61), Expect = 7.9
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +1
Query: 271 SGPQLSTGASRPNTPITSCTMHPS-PPPANRXSGEYRRSGPCHCHGT 408
SGP L+ G+ P+ CT PS P + S +Y S PC GT
Sbjct: 735 SGPCLNGGSCNPSPGGYYCTCPPSHTGPQCQTSTDYCVSAPCFNGGT 781
>AL662830-9|CAI17543.1| 2005|Homo sapiens Notch homolog 4
(Drosophila) protein.
Length = 2005
Score = 28.7 bits (61), Expect = 7.9
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +1
Query: 271 SGPQLSTGASRPNTPITSCTMHPS-PPPANRXSGEYRRSGPCHCHGT 408
SGP L+ G+ P+ CT PS P + S +Y S PC GT
Sbjct: 737 SGPCLNGGSCNPSPGGYYCTCPPSHTGPQCQTSTDYCVSAPCFNGGT 783
>AF488550-1|AAO49470.1| 774|Homo sapiens hyperpolarization
activated cyclic nucleotide-gated potassium channel
protein.
Length = 774
Score = 28.7 bits (61), Expect = 7.9
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +1
Query: 286 STGASRPNTPITSCTMHPSPPPANRXSGEYRRSGP 390
+ GAS TP +PPPA SG +SGP
Sbjct: 8 AAGASEGATPGLEAVPPVAPPPATAASGPIPKSGP 42
>AF312387-1|AAG48615.1| 232|Homo sapiens AML1/AMP19 fusion protein
protein.
Length = 232
Score = 28.7 bits (61), Expect = 7.9
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +2
Query: 236 LHFGKRVGNAYRLARSCPQVQAARTLPSPAVRCIPPP 346
L F +R+ +L R+ +V P+P RC+P P
Sbjct: 192 LSFSERLSELEQLRRTAMRVSPHHPAPTPNPRCLPEP 228
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,568,615
Number of Sequences: 237096
Number of extensions: 1532385
Number of successful extensions: 5648
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 5226
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5644
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3030544982
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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