Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20329
(410 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z29560-5|CAA82664.1| 1385|Caenorhabditis elegans Hypothetical pr... 30 0.57
AF040647-2|AAB94995.3| 299|Caenorhabditis elegans Hypothetical ... 29 1.7
Z81581-6|CAB04666.1| 679|Caenorhabditis elegans Hypothetical pr... 28 3.0
Z81581-5|CAB04667.2| 646|Caenorhabditis elegans Hypothetical pr... 28 3.0
Z69383-11|CAM06588.1| 110|Caenorhabditis elegans Hypothetical p... 28 3.0
Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z19152-6|CAA79542.2| 774|Caenorhabditis elegans Hypothetical pr... 27 7.0
AL110490-7|CAD59175.1| 533|Caenorhabditis elegans Hypothetical ... 26 9.2
AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical ... 26 9.2
AF022979-10|AAB69905.3| 651|Caenorhabditis elegans Nematode ast... 26 9.2
>Z29560-5|CAA82664.1| 1385|Caenorhabditis elegans Hypothetical protein
K03H1.5 protein.
Length = 1385
Score = 30.3 bits (65), Expect = 0.57
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 174 GLLGDGNNEPYDDFRLPNGKICTSESESVT 263
GLLG NN+P DD P+G + ++ + T
Sbjct: 1036 GLLGTYNNDPADDLTTPSGTVTRVQNPTTT 1065
>AF040647-2|AAB94995.3| 299|Caenorhabditis elegans Hypothetical
protein F54D12.5 protein.
Length = 299
Score = 28.7 bits (61), Expect = 1.7
Identities = 20/61 (32%), Positives = 26/61 (42%)
Frame = +1
Query: 193 TTSLTMTSGYLMERSALRKASR*RVPSGPQLSTGASRPNTPITSCTMHPSPPPANRXSGE 372
T+S +MT+ E SA A + SG ST AS T + PP +NR
Sbjct: 56 TSSSSMTASAASEVSAALSAMNRDISSGSGSSTAASATATTSSKLPRCTPPPVSNRQLKR 115
Query: 373 Y 375
Y
Sbjct: 116 Y 116
>Z81581-6|CAB04666.1| 679|Caenorhabditis elegans Hypothetical
protein T02E1.3b protein.
Length = 679
Score = 27.9 bits (59), Expect = 3.0
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = +1
Query: 220 YLMERSALRKASR*RVPSGPQLSTGASRPNTPITSCTMHPSPPPANRXSGEYRRSGPCHC 399
+++ER + + R S Q+S G N P+T PP R +G + CH
Sbjct: 355 FMIERGYINERDVSRQTSSDQMSNG-HHFNAPMT-------PPYHPRLAGNEPNTSDCHY 406
Query: 400 HGT 408
HGT
Sbjct: 407 HGT 409
>Z81581-5|CAB04667.2| 646|Caenorhabditis elegans Hypothetical
protein T02E1.3a protein.
Length = 646
Score = 27.9 bits (59), Expect = 3.0
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = +1
Query: 220 YLMERSALRKASR*RVPSGPQLSTGASRPNTPITSCTMHPSPPPANRXSGEYRRSGPCHC 399
+++ER + + R S Q+S G N P+T PP R +G + CH
Sbjct: 322 FMIERGYINERDVSRQTSSDQMSNG-HHFNAPMT-------PPYHPRLAGNEPNTSDCHY 373
Query: 400 HGT 408
HGT
Sbjct: 374 HGT 376
>Z69383-11|CAM06588.1| 110|Caenorhabditis elegans Hypothetical
protein F13E9.15 protein.
Length = 110
Score = 27.9 bits (59), Expect = 3.0
Identities = 13/41 (31%), Positives = 17/41 (41%)
Frame = +1
Query: 268 PSGPQLSTGASRPNTPITSCTMHPSPPPANRXSGEYRRSGP 390
PSGP P T+ + P PP + G+ SGP
Sbjct: 21 PSGPGGQQNGLGPQGGTTAASGQPQPPQPGQPGGQQTGSGP 61
>Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical
protein C46C2.1b protein.
Length = 1677
Score = 26.6 bits (56), Expect = 7.0
Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +1
Query: 226 MERSALRKASR*RVPSGPQLSTGASRPNTPITSCTMHPSPPP-ANRXSGEYRRS 384
+E+ L K + + P + P TP +S P PPP + + S E ++S
Sbjct: 731 LEKERLEKKAAAAAAANPNPTPIPPTPATPHSSAQQQPIPPPLSTQTSAEIQQS 784
>Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical
protein C46C2.1a protein.
Length = 1838
Score = 26.6 bits (56), Expect = 7.0
Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +1
Query: 226 MERSALRKASR*RVPSGPQLSTGASRPNTPITSCTMHPSPPP-ANRXSGEYRRS 384
+E+ L K + + P + P TP +S P PPP + + S E ++S
Sbjct: 731 LEKERLEKKAAAAAAANPNPTPIPPTPATPHSSAQQQPIPPPLSTQTSAEIQQS 784
>Z19152-6|CAA79542.2| 774|Caenorhabditis elegans Hypothetical
protein B0464.5c protein.
Length = 774
Score = 26.6 bits (56), Expect = 7.0
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 277 PQLSTGASRPNTPITSCTMHPSPP 348
PQL G+S NTP + T+ P PP
Sbjct: 381 PQLLQGSSCVNTPSSPRTVPPPPP 404
>AL110490-7|CAD59175.1| 533|Caenorhabditis elegans Hypothetical
protein Y48B6A.6b protein.
Length = 533
Score = 26.2 bits (55), Expect = 9.2
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +1
Query: 310 TPITSCTMHPSPPPANRXSGEYRRSGP 390
TPI ++ P PPP RR+GP
Sbjct: 396 TPIRDSSLPPPPPPKPETPLAIRRAGP 422
>AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical
protein Y48B6A.6a protein.
Length = 687
Score = 26.2 bits (55), Expect = 9.2
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +1
Query: 310 TPITSCTMHPSPPPANRXSGEYRRSGP 390
TPI ++ P PPP RR+GP
Sbjct: 396 TPIRDSSLPPPPPPKPETPLAIRRAGP 422
>AF022979-10|AAB69905.3| 651|Caenorhabditis elegans Nematode
astacin protease protein32 protein.
Length = 651
Score = 26.2 bits (55), Expect = 9.2
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -2
Query: 337 DASYSW*WECSGGLHLWTAAGQTVRVTDSLS 245
D SY W W + ++ TAA T VT S S
Sbjct: 58 DGSYFWKWTWNSRINSTTAATPTSTVTTSTS 88
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,434,324
Number of Sequences: 27780
Number of extensions: 222156
Number of successful extensions: 816
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 755
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 809
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 662437636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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