Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20328
         (458 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P09335 Cluster: Low molecular 30 kDa lipoprotein PBMHP-...   144   8e-34
UniRef50_P19616 Cluster: Microvitellogenin precursor; n=3; Mandu...    72   5e-12
UniRef50_Q75RW3 Cluster: BmLSP-T; n=2; Bombyx mori|Rep: BmLSP-T ...    71   1e-11
UniRef50_Q00802 Cluster: Low molecular mass 30 kDa lipoprotein 1...    66   3e-10
UniRef50_P09334 Cluster: Low molecular 30 kDa lipoprotein PBMHP-...    64   1e-09
UniRef50_Q2PQU4 Cluster: Putative paralytic peptide-binding prot...    62   4e-09
UniRef50_Q76IB6 Cluster: Growth blocking peptide binding protein...    59   5e-08
UniRef50_UPI0000DB6F3D Cluster: PREDICTED: similar to zinc finge...    32   5.2  
UniRef50_A1RS03 Cluster: Putative uncharacterized protein; n=1; ...    31   9.0  

>UniRef50_P09335 Cluster: Low molecular 30 kDa lipoprotein PBMHP-12
           precursor; n=5; Bombyx mori|Rep: Low molecular 30 kDa
           lipoprotein PBMHP-12 precursor - Bombyx mori (Silk moth)
          Length = 264

 Score =  144 bits (349), Expect = 8e-34
 Identities = 63/69 (91%), Positives = 68/69 (98%)
 Frame = +1

Query: 250 QERNTMEYCYKLWVGNGQEIVRKYFPLNFRLIMAGNYVKIIYRNYNLALKLGSTTNPSNE 429
           + RNTMEYCYKLWVGNGQ+IV+KYFPL+FRLIMAGNYVK+IYRNYNLALKLGSTTNPSNE
Sbjct: 76  KRRNTMEYCYKLWVGNGQDIVKKYFPLSFRLIMAGNYVKLIYRNYNLALKLGSTTNPSNE 135

Query: 430 RIAYGDGVD 456
           RIAYGDGVD
Sbjct: 136 RIAYGDGVD 144



 Score = 90.2 bits (214), Expect = 2e-17
 Identities = 41/47 (87%), Positives = 47/47 (100%)
 Frame = +2

Query: 113 NKELEEKLYNSILTGDYDSAVRQSLEYESQGKGSIIQNVVNNLIIDK 253
           N++LE+KLYNSILTGDYDSAVR+SLEYESQG+GSI+QNVVNNLIIDK
Sbjct: 30  NQDLEDKLYNSILTGDYDSAVRKSLEYESQGQGSIVQNVVNNLIIDK 76


>UniRef50_P19616 Cluster: Microvitellogenin precursor; n=3; Manduca
           sexta|Rep: Microvitellogenin precursor - Manduca sexta
           (Tobacco hawkmoth) (Tobacco hornworm)
          Length = 249

 Score = 72.1 bits (169), Expect = 5e-12
 Identities = 31/68 (45%), Positives = 48/68 (70%)
 Frame = +1

Query: 253 ERNTMEYCYKLWVGNGQEIVRKYFPLNFRLIMAGNYVKIIYRNYNLALKLGSTTNPSNER 432
           +RNTMEY Y+LW    ++IV++ FP+ FR+++  + +K+I +  NLA+KLG  T+ S +R
Sbjct: 64  QRNTMEYAYQLWSLEARDIVKERFPIQFRMMLGEHSIKLINKRDNLAMKLGVATDNSGDR 123

Query: 433 IAYGDGVD 456
           IAYG   D
Sbjct: 124 IAYGAADD 131



 Score = 48.0 bits (109), Expect = 1e-04
 Identities = 24/66 (36%), Positives = 34/66 (51%)
 Frame = +2

Query: 128 EKLYNSILTGDYDSAVRQSLEYESQGKGSIIQNVVNNLIIDKNGTPWSTATSCGSATDRK 307
           + +YN+++ GD D AV +S E + QGKG II   VN LI D        A    S   R 
Sbjct: 22  DDIYNNVVIGDIDGAVAKSKELQKQGKGDIITEAVNRLIRDSQRNTMEYAYQLWSLEARD 81

Query: 308 LLESTF 325
           +++  F
Sbjct: 82  IVKERF 87


>UniRef50_Q75RW3 Cluster: BmLSP-T; n=2; Bombyx mori|Rep: BmLSP-T -
           Bombyx mori (Silk moth)
          Length = 267

 Score = 70.9 bits (166), Expect = 1e-11
 Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
 Frame = +1

Query: 253 ERNTMEYCYKLW--VGNGQEIVRKYFPLNFRLIMAGNYVKIIYRNYNLALKLGSTTNPSN 426
           +RN  +  YKLW  +   QEIV++YFP+ FR I + N VKII +  NLA+KLG   +  N
Sbjct: 78  KRNICDLAYKLWDYMDESQEIVKEYFPVIFRQIFSENSVKIINKRDNLAIKLGDALDSDN 137

Query: 427 ERIAYGDGVD 456
           +R+AYGD  D
Sbjct: 138 DRVAYGDAND 147


>UniRef50_Q00802 Cluster: Low molecular mass 30 kDa lipoprotein 19G1
           precursor; n=3; Bombyx mori|Rep: Low molecular mass 30
           kDa lipoprotein 19G1 precursor - Bombyx mori (Silk moth)
          Length = 256

 Score = 66.5 bits (155), Expect = 3e-10
 Identities = 30/66 (45%), Positives = 41/66 (62%)
 Frame = +1

Query: 259 NTMEYCYKLWVGNGQEIVRKYFPLNFRLIMAGNYVKIIYRNYNLALKLGSTTNPSNERIA 438
           N MEY Y+LW+   ++IVR  FP+ FRLI A N +K++Y+   LAL L +     + R  
Sbjct: 73  NCMEYAYQLWLQGSKDIVRDCFPVEFRLIFAENAIKLMYKRDGLALTLSNDVQGDDGRPR 132

Query: 439 YGDGVD 456
           YGDG D
Sbjct: 133 YGDGKD 138



 Score = 49.2 bits (112), Expect = 4e-05
 Identities = 23/44 (52%), Positives = 29/44 (65%)
 Frame = +2

Query: 113 NKELEEKLYNSILTGDYDSAVRQSLEYESQGKGSIIQNVVNNLI 244
           N  LEE+LYNS++  DYDSAV +S     + K  +I NVVN LI
Sbjct: 24  NDILEEQLYNSVVVADYDSAVEKSKHLYEEKKSEVITNVVNKLI 67


>UniRef50_P09334 Cluster: Low molecular 30 kDa lipoprotein PBMHP-6
           precursor; n=2; Bombyx mori|Rep: Low molecular 30 kDa
           lipoprotein PBMHP-6 precursor - Bombyx mori (Silk moth)
          Length = 256

 Score = 64.1 bits (149), Expect = 1e-09
 Identities = 30/68 (44%), Positives = 45/68 (66%)
 Frame = +1

Query: 253 ERNTMEYCYKLWVGNGQEIVRKYFPLNFRLIMAGNYVKIIYRNYNLALKLGSTTNPSNER 432
           +RNTM++ Y+LW  +G+EIV+ YFP+ FR+I     VK+I +  + ALKL    N  + +
Sbjct: 73  KRNTMDFAYQLWTKDGKEIVKSYFPIQFRVIFTEQTVKLINKRDHHALKLIDQQN--HNK 130

Query: 433 IAYGDGVD 456
           IA+GD  D
Sbjct: 131 IAFGDSKD 138



 Score = 39.9 bits (89), Expect = 0.026
 Identities = 19/68 (27%), Positives = 37/68 (54%)
 Frame = +2

Query: 122 LEEKLYNSILTGDYDSAVRQSLEYESQGKGSIIQNVVNNLIIDKNGTPWSTATSCGSATD 301
           L E+LY S++ G+Y++A+ +  EY  + KG +I+  V  LI +        A    +   
Sbjct: 29  LAEQLYMSVVIGEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMDFAYQLWTKDG 88

Query: 302 RKLLESTF 325
           +++++S F
Sbjct: 89  KEIVKSYF 96


>UniRef50_Q2PQU4 Cluster: Putative paralytic peptide-binding
           protein; n=1; Bombyx mori|Rep: Putative paralytic
           peptide-binding protein - Bombyx mori (Silk moth)
          Length = 436

 Score = 62.5 bits (145), Expect = 4e-09
 Identities = 27/67 (40%), Positives = 41/67 (61%)
 Frame = +1

Query: 256 RNTMEYCYKLWVGNGQEIVRKYFPLNFRLIMAGNYVKIIYRNYNLALKLGSTTNPSNERI 435
           +N M + YKLW    ++IV  YFP  F+LI+    +K+I  +YN ALKL +  +   +R+
Sbjct: 251 KNAMSFAYKLWHEGHKDIVEDYFPSEFQLILDQKRIKLIGNHYNQALKLDANVDRYKDRL 310

Query: 436 AYGDGVD 456
            +GDG D
Sbjct: 311 TWGDGKD 317


>UniRef50_Q76IB6 Cluster: Growth blocking peptide binding protein;
           n=1; Mythimna separata|Rep: Growth blocking peptide
           binding protein - Pseudaletia separata (Oriental
           armyworm) (Mythimna separata)
          Length = 430

 Score = 58.8 bits (136), Expect = 5e-08
 Identities = 27/64 (42%), Positives = 38/64 (59%)
 Frame = +1

Query: 256 RNTMEYCYKLWVGNGQEIVRKYFPLNFRLIMAGNYVKIIYRNYNLALKLGSTTNPSNERI 435
           R  M + YKLW G  +EIVR +FP  F+ I   + V I+ + Y   LKL   T+  N+R+
Sbjct: 242 RKLMSFAYKLWHGGAKEIVRNHFPKAFQHIFNEDAVTIVNKQYQQPLKLDVNTDSMNDRL 301

Query: 436 AYGD 447
           A+GD
Sbjct: 302 AWGD 305



 Score = 38.3 bits (85), Expect = 0.079
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = +2

Query: 113 NKELEEKLYNSILTGDYDSAVRQSLEYESQGKGSIIQNVVNNLI 244
           N   EE++YNS++ GDYD+AV  +  Y           +V  L+
Sbjct: 194 NHNFEEEVYNSVINGDYDAAVNMAQSYGVASNSEFTNRIVTRLM 237


>UniRef50_UPI0000DB6F3D Cluster: PREDICTED: similar to zinc finger
           protein 235; n=1; Apis mellifera|Rep: PREDICTED: similar
           to zinc finger protein 235 - Apis mellifera
          Length = 721

 Score = 32.3 bits (70), Expect = 5.2
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = +2

Query: 185 LEYESQGKGSIIQNVVNNLIIDKNGTPWSTATSCGSAT 298
           +EY  + K ++++  +NN  ID+ G+ W     C  AT
Sbjct: 289 VEYTKRTKHALLETTLNNPTIDETGSHWYVCPFCNEAT 326


>UniRef50_A1RS03 Cluster: Putative uncharacterized protein; n=1;
           Pyrobaculum islandicum DSM 4184|Rep: Putative
           uncharacterized protein - Pyrobaculum islandicum (strain
           DSM 4184 / JCM 9189)
          Length = 90

 Score = 31.5 bits (68), Expect = 9.0
 Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = -3

Query: 438 GNSLIRGI-GCGTELQSXVVVSVNDLDIVSGHDESKV*WKVLSNNFL 301
           G SL+  I GC T+    VV+ VNDLD +    E K  W V  ++F+
Sbjct: 6   GPSLLAKILGCPTQCDCDVVIHVNDLDKIK---ERKCVWSVEDSSFI 49


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 423,164,866
Number of Sequences: 1657284
Number of extensions: 7799761
Number of successful extensions: 22094
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 21470
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22085
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 24351434270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)