Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20328
         (458 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    25   0.34 
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    25   0.34 
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    23   1.8  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   2.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   5.5  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    21   7.3  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    20   9.6  

>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 25.0 bits (52), Expect = 0.34
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +2

Query: 221 QNVVNNLIIDKNGTPWSTATSCGSATDRKLLESTFH 328
           ++ + NL+ D  GT   T+T     T RK+L   FH
Sbjct: 107 KSAIYNLLHDWLGTGLLTSTGLKWQTRRKILTPAFH 142


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 25.0 bits (52), Expect = 0.34
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +2

Query: 221 QNVVNNLIIDKNGTPWSTATSCGSATDRKLLESTFH 328
           ++ + NL+ D  GT   T+T     T RK+L   FH
Sbjct: 107 KSAIYNLLHDWLGTGLLTSTGLKWQTRRKILTPAFH 142


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 10/43 (23%), Positives = 23/43 (53%)
 Frame = -3

Query: 438 GNSLIRGIGCGTELQSXVVVSVNDLDIVSGHDESKV*WKVLSN 310
           GN+++ GI   ++L++ ++ S        G+D   + W+  +N
Sbjct: 108 GNAILNGIVASSKLRASLISSCLSFFSQWGYDGIDIDWEYPAN 150


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.2 bits (45), Expect = 2.4
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +2

Query: 251 KNGTPWSTATSCGSATDR 304
           +NGT  +TA SC S+T R
Sbjct: 378 RNGTFSTTANSCRSSTFR 395


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +2

Query: 266  WSTATSCGSATDRKLLESTFH*TLDSSWP 352
            W+T T+  + T R    ST      ++WP
Sbjct: 1052 WTTTTTRRTTTTRPTTTSTTTRPTTTNWP 1080



 Score = 21.0 bits (42), Expect = 5.5
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +1

Query: 118  RTRGETVQQHPHRRL 162
            +T+G TV Q P+RR+
Sbjct: 1687 KTQGWTVVQDPNRRM 1701


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 20.6 bits (41), Expect = 7.3
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -1

Query: 326 GKYFLTISCPLPTHSL*QYSMVFRSCQ 246
           G  F T+   +P H+  +Y  VF+  Q
Sbjct: 263 GSVFNTVLELMPKHACSEYCRVFKMLQ 289


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 20.2 bits (40), Expect = 9.6
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = -2

Query: 295 CRPTACSSTPWCSVLVN 245
           C+P  C +   C  LVN
Sbjct: 226 CKPNPCQNGGTCHDLVN 242


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,961
Number of Sequences: 336
Number of extensions: 1888
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10511300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)