Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20328
         (458 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY579078-1|AAT81602.1|  425|Anopheles gambiae neuropeptide F rec...    25   1.3  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   5.1  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   6.8  
CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein...    22   9.0  

>AY579078-1|AAT81602.1|  425|Anopheles gambiae neuropeptide F
           receptor protein.
          Length = 425

 Score = 25.0 bits (52), Expect = 1.3
 Identities = 15/39 (38%), Positives = 25/39 (64%)
 Frame = -3

Query: 303 LSVADPQLVAVLHGVPFLSMIRLLTTFWMMEPLPWLSYS 187
           L+V+D  L+  L  +P L+++ +LT +W M  LP+L  S
Sbjct: 83  LAVSD--LLLCLVTMP-LTLVEILTKYWPMGRLPFLCKS 118


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.0 bits (47), Expect = 5.1
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -3

Query: 96  TADISATPALTASTHDAXTTRN 31
           TAD S++PA ++ TH   T R+
Sbjct: 236 TADPSSSPAYSSITHYEPTARS 257


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 22.6 bits (46), Expect = 6.8
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +1

Query: 274 CYKLWVGNGQEIVRKY 321
           C  LW+GN  + + KY
Sbjct: 775 CASLWLGNAIQTLNKY 790


>CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein
           protein.
          Length = 415

 Score = 22.2 bits (45), Expect = 9.0
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = +1

Query: 307 IVRKYFPLNFRLIMAGNYVKIIYRNYNLALKLGSTTNPSNER 432
           +V  Y P    LI  GN V  +  +  + L+ GS    SNE+
Sbjct: 113 LVEVYEPPPVVLIDTGNNVVEVNTDDQIVLEDGSVEGESNEQ 154


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 447,939
Number of Sequences: 2352
Number of extensions: 7485
Number of successful extensions: 22
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 39544623
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)