Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20328
         (458 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X03431-2|CAB57796.1| 1059|Drosophila melanogaster protein ( Dros...    28   5.3  
AY071309-1|AAL48931.1|  316|Drosophila melanogaster RE33721p pro...    28   6.9  
AE014134-2459|AAF53372.1|  377|Drosophila melanogaster CG16876-P...    28   6.9  
AY061403-1|AAL28951.1| 1486|Drosophila melanogaster LD33266p pro...    27   9.2  
AE014296-3600|AAF51764.1| 1486|Drosophila melanogaster CG7158-PA...    27   9.2  

>X03431-2|CAB57796.1| 1059|Drosophila melanogaster protein (
           Drosophila melanogastertransposable element 297. ).
          Length = 1059

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
 Frame = +1

Query: 358 YVKIIY--RNYNLALKLGSTTNPSNERI 435
           Y+KI+Y  R+Y   L  GST N  NE I
Sbjct: 15  YIKIVYKGRSYKCLLDTGSTINMINENI 42


>AY071309-1|AAL48931.1|  316|Drosophila melanogaster RE33721p
           protein.
          Length = 316

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +1

Query: 139 QQHPHRRLRQCCPSELGI*EPRQGLHHPECS 231
           +Q  HR +R+CCP  L +     GL  P CS
Sbjct: 67  EQVTHRLVRECCPGYLQV---ESGLCEPICS 94


>AE014134-2459|AAF53372.1|  377|Drosophila melanogaster CG16876-PA
           protein.
          Length = 377

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +1

Query: 139 QQHPHRRLRQCCPSELGI*EPRQGLHHPECS 231
           +Q  HR +R+CCP  L +     GL  P CS
Sbjct: 67  EQVTHRLVRECCPGYLQV---ESGLCEPICS 94


>AY061403-1|AAL28951.1| 1486|Drosophila melanogaster LD33266p protein.
          Length = 1486

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = +2

Query: 119  ELEEKLYNSILTGDYDSAVRQSLEYESQGKGSIIQNVVNNLIIDKNGTPWSTATS 283
            +L++ L NS + GD  S   +S    S    + I   +NN  ID + T  ++ TS
Sbjct: 1149 QLDQSLMNSTVNGDESSTFNESFSKLSHNNNNSISKHMNN--IDCSITSTTSTTS 1201


>AE014296-3600|AAF51764.1| 1486|Drosophila melanogaster CG7158-PA
            protein.
          Length = 1486

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = +2

Query: 119  ELEEKLYNSILTGDYDSAVRQSLEYESQGKGSIIQNVVNNLIIDKNGTPWSTATS 283
            +L++ L NS + GD  S   +S    S    + I   +NN  ID + T  ++ TS
Sbjct: 1149 QLDQSLMNSTVNGDESSTFNESFSKLSHNNNNSISKHMNN--IDCSITSTTSTTS 1201


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,619,017
Number of Sequences: 53049
Number of extensions: 386180
Number of successful extensions: 1072
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1048
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1068
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1518217281
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)