Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20328
         (458 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g59210.2 68418.m07421 myosin heavy chain-related contains wea...    29   1.1  
At5g59210.1 68418.m07420 myosin heavy chain-related contains wea...    29   1.1  
At2g18700.1 68415.m02178 glycosyl transferase family 20 protein ...    29   1.5  
At4g13310.2 68417.m02080 cytochrome P450 71A20, putative (CYP71A...    28   2.6  
At4g13310.1 68417.m02081 cytochrome P450 71A20, putative (CYP71A...    28   2.6  
At2g33860.1 68415.m04157 auxin-responsive factor (ARF3) / ETTIN ...    28   3.5  
At1g64255.1 68414.m07280 SWIM zinc finger family protein contain...    27   4.6  
At4g17330.1 68417.m02600 agenet domain-containing protein contai...    27   6.1  
At3g12520.1 68416.m01558 sulfate transporter family protein simi...    27   6.1  

>At5g59210.2 68418.m07421 myosin heavy chain-related contains weak
           similarity to Myosin heavy chain, gizzard smooth muscle
           (Swiss-Prot:P10587) [Gallus gallus]
          Length = 433

 Score = 29.5 bits (63), Expect = 1.1
 Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
 Frame = +2

Query: 128 EKLY--NSILTGDYDSAVRQSLEYESQGKGSIIQNVVNNLIIDKNGTPWSTATSCG 289
           EKL+  NS L+  Y  ++  S ++E+Q K  + QNV    ++DK  T  + + S G
Sbjct: 298 EKLFEENSNLSASYQESINISNQWENQVKECLKQNVELREVLDKLRTEQAGSFSRG 353


>At5g59210.1 68418.m07420 myosin heavy chain-related contains weak
           similarity to Myosin heavy chain, gizzard smooth muscle
           (Swiss-Prot:P10587) [Gallus gallus]
          Length = 434

 Score = 29.5 bits (63), Expect = 1.1
 Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
 Frame = +2

Query: 128 EKLY--NSILTGDYDSAVRQSLEYESQGKGSIIQNVVNNLIIDKNGTPWSTATSCG 289
           EKL+  NS L+  Y  ++  S ++E+Q K  + QNV    ++DK  T  + + S G
Sbjct: 299 EKLFEENSNLSASYQESINISNQWENQVKECLKQNVELREVLDKLRTEQAGSFSRG 354


>At2g18700.1 68415.m02178 glycosyl transferase family 20 protein /
           trehalose-phosphatase family protein similar to
           trehalose-6-phosphate synthase SL-TPS/P [Selaginella
           lepidophylla] GI:4100325; contains Pfam profiles
           PF00982: Glycosyltransferase family 20, PF02358:
           Trehalose-phosphatase
          Length = 862

 Score = 29.1 bits (62), Expect = 1.5
 Identities = 18/65 (27%), Positives = 30/65 (46%)
 Frame = -2

Query: 310 QFPVRCRPTACSSTPWCSVLVNDQVVNYILDDGXXXXXLIFQALTDSTVVVAGEDAVVQF 131
           Q P+R      SS  WC    ND +   + D       +++    ++ V+ + ++ V QF
Sbjct: 58  QLPLRAHRDI-SSNKWCFEFDNDSLYLQLKDGFPPETEVVYVGSLNADVLPSEQEDVSQF 116

Query: 130 LLEFF 116
           LLE F
Sbjct: 117 LLEKF 121


>At4g13310.2 68417.m02080 cytochrome P450 71A20, putative (CYP71A20)
           Identical to Cytochrome P450 (SP:Q9T0K2) [Arabidopsis
           thaliana]; similar to cytochrome P450 71A4, Solanum
           melongena, PIR2:S36805
          Length = 390

 Score = 28.3 bits (60), Expect = 2.6
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +2

Query: 131 KLYNSILTGDYDSAVRQSLEYESQGKGSIIQNVVNNLII 247
           K+ + IL+G  D A     EY  Q K   IQN++NN ++
Sbjct: 103 KVVDKILSGGRDVAFAPYGEYWRQMKSICIQNLLNNKMV 141


>At4g13310.1 68417.m02081 cytochrome P450 71A20, putative (CYP71A20)
           Identical to Cytochrome P450 (SP:Q9T0K2) [Arabidopsis
           thaliana]; similar to cytochrome P450 71A4, Solanum
           melongena, PIR2:S36805
          Length = 497

 Score = 28.3 bits (60), Expect = 2.6
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +2

Query: 131 KLYNSILTGDYDSAVRQSLEYESQGKGSIIQNVVNNLII 247
           K+ + IL+G  D A     EY  Q K   IQN++NN ++
Sbjct: 103 KVVDKILSGGRDVAFAPYGEYWRQMKSICIQNLLNNKMV 141


>At2g33860.1 68415.m04157 auxin-responsive factor (ARF3) / ETTIN
           protein (ETT) identical to ETTIN GB:AF007788 from
           [Arabidopsis thaliana]
          Length = 608

 Score = 27.9 bits (59), Expect = 3.5
 Identities = 22/62 (35%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
 Frame = -2

Query: 316 F*QFPVRCRPTACSSTPWCSVLVNDQVVNYILDD--GXXXXXLIFQ-ALTDSTVVVAGED 146
           F  F  R  P + SS+P   +L N    N  L+D  G      +F   LTD T  VA   
Sbjct: 509 FQNFSTRILPPSVSSSPSSVLLTNSNSPNGRLEDHHGGSGRCRLFGFPLTDETTAVASAT 568

Query: 145 AV 140
           AV
Sbjct: 569 AV 570


>At1g64255.1 68414.m07280 SWIM zinc finger family protein contains
           Pfam profile PF04434: SWIM zinc finger
          Length = 750

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +1

Query: 268 EYCYKLWVGNGQEIVRKYFPLNF 336
           EY  KL + +G +   KYFPL F
Sbjct: 396 EYQLKLMIASGVDAANKYFPLAF 418


>At4g17330.1 68417.m02600 agenet domain-containing protein contains
           Pfam PF05641: Agenet domain
          Length = 1058

 Score = 27.1 bits (57), Expect = 6.1
 Identities = 11/32 (34%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
 Frame = +3

Query: 108 VLTKNSRR--NCTTASSPATTTVLSVRAWNMR 197
           V+T+ +++  N  T   PA    L+++AWN+R
Sbjct: 703 VITEKNKKDENTVTVHFPAEEETLTIKAWNLR 734


>At3g12520.1 68416.m01558 sulfate transporter family protein similar
           to sulfate transporter [Arabidopsis thaliana]
           GI:3777483; contains Pfam profiles PF00916: Sulfate
           transporter family, PF01740: STAS domain
          Length = 677

 Score = 27.1 bits (57), Expect = 6.1
 Identities = 20/62 (32%), Positives = 31/62 (50%)
 Frame = +1

Query: 256 RNTMEYCYKLWVGNGQEIVRKYFPLNFRLIMAGNYVKIIYRNYNLALKLGSTTNPSNERI 435
           RN  +Y  + +  NG  IVR   P+ F  I   +Y+K   R Y +A+   ++  P  ERI
Sbjct: 501 RNMKQYP-EAYTYNGIVIVRIDAPIYFANI---SYIKDRLREYEVAIDKHTSKGPDMERI 556

Query: 436 AY 441
            +
Sbjct: 557 YF 558


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,220,580
Number of Sequences: 28952
Number of extensions: 172527
Number of successful extensions: 400
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 393
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 400
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 762235320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)