Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20325
         (658 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    27   0.10 
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    27   0.10 
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    27   0.10 
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    27   0.10 
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    27   0.10 
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    21   6.7  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   6.7  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   6.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   6.7  

>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 27.5 bits (58), Expect = 0.10
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = -3

Query: 647 FLSVYTNHANTAFDLVLSI 591
           +L++YT H N +FD+V+ I
Sbjct: 100 YLTIYTTHVNASFDVVVYI 118


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 27.5 bits (58), Expect = 0.10
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = -3

Query: 647 FLSVYTNHANTAFDLVLSI 591
           +L++YT H N +FD+V+ I
Sbjct: 100 YLTIYTTHVNASFDVVVYI 118


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 27.5 bits (58), Expect = 0.10
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = -3

Query: 647 FLSVYTNHANTAFDLVLSI 591
           +L++YT H N +FD+V+ I
Sbjct: 100 YLTIYTTHVNASFDVVVYI 118


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 27.5 bits (58), Expect = 0.10
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = -3

Query: 647 FLSVYTNHANTAFDLVLSI 591
           +L++YT H N +FD+V+ I
Sbjct: 100 YLTIYTTHVNASFDVVVYI 118


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 27.5 bits (58), Expect = 0.10
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = -3

Query: 647 FLSVYTNHANTAFDLVLSI 591
           +L++YT H N +FD+V+ I
Sbjct: 100 YLTIYTTHVNASFDVVVYI 118


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +3

Query: 180 FDDSELQALIDENDPENSGKINFDGSVI 263
           FDD+ ++   D+NDP  +  +    S+I
Sbjct: 42  FDDAFIRTSEDDNDPHVNEYVESLASII 69


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +3

Query: 180 FDDSELQALIDENDPENSGKINFDGSVI 263
           FDD+ ++   D+NDP  +  +    S+I
Sbjct: 356 FDDAFIRTSEDDNDPHVNEYVESLASII 383


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +3

Query: 180 FDDSELQALIDENDPENSGKINFDGSVI 263
           FDD+ ++   D+NDP  +  +    S+I
Sbjct: 589 FDDAFIRTSEDDNDPHVNEYVESLASII 616


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +3

Query: 180 FDDSELQALIDENDPENSGKINFDGSVI 263
           FDD+ ++   D+NDP  +  +    S+I
Sbjct: 589 FDDAFIRTSEDDNDPHVNEYVESLASII 616


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,264
Number of Sequences: 336
Number of extensions: 2774
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16969115
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)