Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20321
         (515 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   1.6  
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    23   2.1  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    22   2.8  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   2.8  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    21   4.9  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    21   4.9  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   4.9  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   4.9  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   6.5  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +1

Query: 214 PLPVALCRGEGVFVGMSKEKSIMI 285
           PLP  L RG+ V++G   E++  I
Sbjct: 455 PLPRKLVRGQDVWLGKGAEQTRQI 478


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 10/40 (25%), Positives = 22/40 (55%)
 Frame = -1

Query: 215 GA*FLQPYLSSNWKISLDDKFCSAIILRNFYDMVRYYCAC 96
           GA + + Y +    I++D+   S  +L+N+++ +    AC
Sbjct: 12  GAVWCEQYTTKYDNINVDEILASERLLKNYFNCIMDRGAC 51


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -1

Query: 320 VTLVNCGVCA*KIIILFSFDIPTNTPSPRHK 228
           VTL  CG+ +  +II+   D+    P   +K
Sbjct: 314 VTLELCGMISTYLIIMIQLDLARTVPKFENK 344


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +1

Query: 193 YGCRNYAPLPV 225
           YG RNY P PV
Sbjct: 198 YGLRNYGPEPV 208


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -1

Query: 146 AIILRNFYDMVRYYCAC 96
           ++IL+N+ +MV   C C
Sbjct: 355 SVILKNYKEMVVVGCGC 371


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 13/42 (30%), Positives = 19/42 (45%)
 Frame = -3

Query: 447 DHIQITLSYTFHTCQVDRNKMLLTLVSNYQLVSSKLQLF*GG 322
           D I I +SY +HT    +  +   L  N   V S +Q +  G
Sbjct: 195 DFINI-MSYDYHTADQPQTGLNAPLYGNSMSVDSSVQSWLSG 235


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +3

Query: 390 YSDQLGKYEKYMTELFGYDRLLPMNTGV 473
           YS +L    KY+ ++ GY   L M T +
Sbjct: 98  YSRKLSGIFKYIDQMAGYTGFLAMLTSM 125


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +3

Query: 390 YSDQLGKYEKYMTELFGYDRLLPMNTGV 473
           YS +L    KY+ ++ GY   L M T +
Sbjct: 54  YSRKLSGIFKYIDQMAGYTGFLAMLTSM 81


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 65  LCWTVTLKQQRRHNSTVP 118
           LC+ V L+ +RR   TVP
Sbjct: 206 LCFQVFLEGERRGKFTVP 223


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,580
Number of Sequences: 336
Number of extensions: 2921
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)