BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20321
(515 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY344838-1|AAR05809.1| 221|Anopheles gambiae TEP4 protein. 25 1.1
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p... 25 2.0
AY344840-1|AAR05811.1| 221|Anopheles gambiae TEP4 protein. 24 3.5
AY344839-1|AAR05810.1| 221|Anopheles gambiae TEP4 protein. 24 3.5
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol... 23 4.6
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein. 23 8.1
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T... 23 8.1
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T... 23 8.1
>AY344838-1|AAR05809.1| 221|Anopheles gambiae TEP4 protein.
Length = 221
Score = 25.4 bits (53), Expect = 1.1
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +2
Query: 104 NSTVPYRKNFVKLWLNKICHLKKFSSWKTNMVVEITL 214
NS V +R NF++ WL K ++ S T V T+
Sbjct: 113 NSQVSFRTNFLESWLWKTDKIRSSGSTTTKESVPDTI 149
>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
protein.
Length = 3325
Score = 24.6 bits (51), Expect = 2.0
Identities = 14/48 (29%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
Frame = +3
Query: 270 KKYYDFLSA--YSAVNQGHCHPRIIEALKKQADNLTLVSRAFYSDQLG 407
K +FL + Y +Q CHP + A L R Y D+ G
Sbjct: 1509 KSVSNFLGSFNYYCDHQNFCHPYCYRRHMRAATKLIRAIRKIYGDEFG 1556
>AY344840-1|AAR05811.1| 221|Anopheles gambiae TEP4 protein.
Length = 221
Score = 23.8 bits (49), Expect = 3.5
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +2
Query: 104 NSTVPYRKNFVKLWLNKICHLKKFSSWKTNMVVEITL 214
NS V +R NF++ WL K + S T V T+
Sbjct: 113 NSQVSFRTNFLESWLWKTDKIGSSGSTTTKESVPDTI 149
>AY344839-1|AAR05810.1| 221|Anopheles gambiae TEP4 protein.
Length = 221
Score = 23.8 bits (49), Expect = 3.5
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +2
Query: 104 NSTVPYRKNFVKLWLNKICHLKKFSSWKTNMVVEITL 214
NS V +R NF++ WL K + S T V T+
Sbjct: 113 NSQVSFRTNFLESWLWKTDKIGSSGSTTTKESVPDTI 149
>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative
5-oxoprolinase protein.
Length = 1344
Score = 23.4 bits (48), Expect = 4.6
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = +3
Query: 423 MTELFGYD--RLLPMNTGVEGGESACKIARNGG 515
+T+ GYD R + G GG+ AC IAR G
Sbjct: 487 LTQARGYDTSRHVLACFGGAGGQHACSIARQLG 519
>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
Length = 3361
Score = 22.6 bits (46), Expect = 8.1
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -1
Query: 185 SNWKISLDDKFCSAIILRNF 126
S WK+S+D++ + I L F
Sbjct: 530 SYWKLSMDNRIMTYIALHQF 549
>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1977
Score = 22.6 bits (46), Expect = 8.1
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = -3
Query: 501 LSCMHFHLLQHPCS*EAGDHIQITLSYTFHTC 406
L C+H Q PCS E I L+ H+C
Sbjct: 487 LDCVHQIHRQFPCSFEFDMGYLIKLAQHSHSC 518
>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1978
Score = 22.6 bits (46), Expect = 8.1
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = -3
Query: 501 LSCMHFHLLQHPCS*EAGDHIQITLSYTFHTC 406
L C+H Q PCS E I L+ H+C
Sbjct: 487 LDCVHQIHRQFPCSFEFDMGYLIKLAQHSHSC 518
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 570,793
Number of Sequences: 2352
Number of extensions: 12521
Number of successful extensions: 24
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46937349
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -