Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20321
(515 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g46180.1 68418.m05680 ornithine aminotransferase, putative / ... 124 3e-29
At1g80600.1 68414.m09457 acetylornithine aminotransferase, mitoc... 45 3e-05
At4g39660.1 68417.m05608 alanine--glyoxylate aminotransferase, p... 43 1e-04
At2g38400.1 68415.m04717 alanine--glyoxylate aminotransferase, p... 41 4e-04
At3g08860.1 68416.m01030 alanine--glyoxylate aminotransferase, p... 40 8e-04
At5g63570.1 68418.m07979 glutamate-1-semialdehyde 2,1-aminomutas... 31 0.61
At2g17620.1 68415.m02038 cyclin, putative (CYC2a) similar to cyc... 29 2.5
At1g72730.1 68414.m08410 eukaryotic translation initiation facto... 29 2.5
At1g09710.1 68414.m01090 myb family transcription factor contain... 29 2.5
At1g54270.1 68414.m06187 eukaryotic translation initiation facto... 28 3.2
At3g03990.1 68416.m00420 esterase/lipase/thioesterase family pro... 27 5.7
At2g26490.1 68415.m03178 transducin family protein / WD-40 repea... 27 5.7
At5g43310.1 68418.m05293 COP1-interacting protein-related contai... 27 7.5
At3g59290.1 68416.m06609 epsin N-terminal homology (ENTH) domain... 27 7.5
At3g22200.1 68416.m02801 4-aminobutyrate aminotransferase / gamm... 27 9.9
>At5g46180.1 68418.m05680 ornithine aminotransferase, putative /
ornithine--oxo-acid aminotransferase, putative similar
to SP|Q92413 Ornithine aminotransferase (EC 2.6.1.13)
(Ornithine--oxo-acid aminotransferase) [Aspergillus
nidulans] {Emericella nidulans}; contains Pfam profile
PF00202: aminotransferase, class III
Length = 475
Score = 124 bits (300), Expect = 3e-29
Identities = 54/90 (60%), Positives = 71/90 (78%)
Frame = +3
Query: 246 SVRWDVEGKKYYDFLSAYSAVNQGHCHPRIIEALKKQADNLTLVSRAFYSDQLGKYEKYM 425
S WD EGK+Y DFL+AYSAVNQGHCHP+I++AL++Q + LTL SRAFY+D+ + + +
Sbjct: 68 STIWDPEGKRYIDFLAAYSAVNQGHCHPKIMKALQEQVEKLTLSSRAFYNDKFPVFAERL 127
Query: 426 TELFGYDRLLPMNTGVEGGESACKIARNGG 515
T +FGYD +LPMNTG EG E+A K+AR G
Sbjct: 128 TNMFGYDMVLPMNTGAEGVETALKLARKWG 157
Score = 30.7 bits (66), Expect = 0.61
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 160 SSKEIFQLEDKYGCRNYAPLPVALCRGEG 246
SS+ + +LE ++ NY P+PV R G
Sbjct: 39 SSQRLMELESEFSAHNYHPVPVVFSRANG 67
>At1g80600.1 68414.m09457 acetylornithine aminotransferase,
mitochondrial, putative / acetylornithine transaminase,
putative / AOTA, putative / ACOAT, putative similar to
SP|O04866 Acetylornithine aminotransferase,
mitochondrial precursor (EC 2.6.1.11) (ACOAT)
(Acetylornithine transaminase) (AOTA) {Alnus glutinosa};
contains Pfam profile PF00202: aminotransferase, class
III
Length = 457
Score = 45.2 bits (102), Expect = 3e-05
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = +3
Query: 255 WDVEGKKYYDFLSAYSAVNQGHCHPRIIEALKKQADNLTLVSRAFYS-DQLGKYEKYMTE 431
+D EGK+Y D S + GH P + A+ +QA L VS +Y+ Q+ ++ +
Sbjct: 89 FDPEGKEYLDCASGIAVNALGHGDPDWLRAVTEQAGVLAHVSNVYYTIPQIELAKRLVAS 148
Query: 432 LFGYDRLLPMNTGVEGGESACKIAR 506
F DR+ N+G E E+A K +R
Sbjct: 149 SFA-DRVFFCNSGTEANEAAIKFSR 172
>At4g39660.1 68417.m05608 alanine--glyoxylate aminotransferase,
putative / beta-alanine-pyruvate aminotransferase,
putative / AGT, putative similar to SP|Q64565
Alanine--glyoxylate aminotransferase 2, mitochondrial
precursor (EC 2.6.1.44) (AGT 2) (Beta-alanine-pyruvate
aminotransferase) {Rattus norvegicus}; contains Pfam
profile PF00202: aminotransferase, class III
Length = 476
Score = 42.7 bits (96), Expect = 1e-04
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Frame = +3
Query: 255 WDVEGKKYYDFLSAYSAVNQGHCHPRIIEALKKQADNLTLVSRAFYSDQLGKY-EKYMTE 431
+D G++Y D + V+ GHCHP I+ A+ +Q+ L + + +G + E +
Sbjct: 90 YDESGRRYLDAFAGIVTVSCGHCHPDILNAITEQSKLLQHATTIYLHHAIGDFAEALAAK 149
Query: 432 LFGYDRLLP-MNTGVEGGESACKIAR 506
+ G +++ +N+G E E A +AR
Sbjct: 150 MPGNLKVVYFVNSGSEANELAMMMAR 175
>At2g38400.1 68415.m04717 alanine--glyoxylate aminotransferase,
putative / beta-alanine-pyruvate aminotransferase,
putative / AGT, putative similar to SP|Q64565
Alanine--glyoxylate aminotransferase 2, mitochondrial
precursor (EC 2.6.1.44) (AGT 2) (Beta-alanine-pyruvate
aminotransferase) {Rattus norvegicus}; contains Pfam
profile PF00202: aminotransferase, class III
Length = 477
Score = 41.1 bits (92), Expect = 4e-04
Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Frame = +3
Query: 255 WDVEGKKYYDFLSAYSAVNQGHCHPRIIEALKKQADNLTLVSRAFYSDQLGKYEKYMTEL 434
+D G++Y D + + VN GHCHP ++E + Q L + + + + + + +
Sbjct: 92 FDESGRRYLDAFAGIAVVNCGHCHPDVVEPVINQIKRLQHPTVLYLNHAIADFSEALASK 151
Query: 435 FGYDRLLPM--NTGVEGGESACKIAR 506
D + N+G E E A +A+
Sbjct: 152 LPGDLKVVFFTNSGTEANELALMMAK 177
>At3g08860.1 68416.m01030 alanine--glyoxylate aminotransferase,
putative / beta-alanine-pyruvate aminotransferase,
putative / AGT, putative similar to similar to SP|Q64565
Alanine--glyoxylate aminotransferase 2, mitochondrial
precursor (EC 2.6.1.44) (AGT 2) (Beta-alanine-pyruvate
aminotransferase) {Rattus norvegicus}; contains Pfam
profile PF00202: aminotransferase, class III
Length = 481
Score = 40.3 bits (90), Expect = 8e-04
Identities = 20/86 (23%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Frame = +3
Query: 255 WDVEGKKYYDFLSAYSAVNQGHCHPRIIEALKKQADNLTLVSRAFYSDQLGKYEKYMTEL 434
+D G++Y D + V+ GHCHP ++ ++ KQ + + + + + + + +
Sbjct: 95 FDENGRRYLDAFGGIATVSCGHCHPEVVNSVVKQLKLINHSTILYLNHTISDFAEALVST 154
Query: 435 FGYDRLLPM--NTGVEGGESACKIAR 506
D + N+G E E A +AR
Sbjct: 155 LPGDLKVVFFTNSGTEANELAMMMAR 180
>At5g63570.1 68418.m07979 glutamate-1-semialdehyde 2,1-aminomutase 1
(GSA 1) / glutamate-1-semialdehyde aminotransferase 1
(GSA-AT 1) identical to GSA 1 [SP|P42799]
Length = 474
Score = 30.7 bits (66), Expect = 0.61
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = +3
Query: 246 SVRWDVEGKKYYDFLSAYSAVNQGHCHPRIIEAL 347
S WD++G +Y D++ ++ GH ++ AL
Sbjct: 91 SKMWDIDGNEYIDYVGSWGPAIIGHADDEVLAAL 124
>At2g17620.1 68415.m02038 cyclin, putative (CYC2a) similar to cyclin
2b protein [Arabidopsis thaliana] GI:509423; contains
Pfam profiles PF00134: Cyclin, N-terminal domain,
PF02984: Cyclin, C-terminal domain; identical to cDNA
cyc2a mRNA for cyclin 2a protein GI:728518
Length = 429
Score = 28.7 bits (61), Expect = 2.5
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +3
Query: 318 HCHPRIIEALKKQADNLTLVSRAFYSDQLGKYEKYMTELFGY 443
HCH + ++ ++L RA + G Y KY T FGY
Sbjct: 371 HCHYSEDQLMECSRKLVSLHQRAATGNLTGVYRKYSTSKFGY 412
>At1g72730.1 68414.m08410 eukaryotic translation initiation factor
4A, putative / eIF-4A, putative similar to Eukaryotic
initiation factor 4A-10 GB:P41382 [Nicotiana tabacum];
identical to (putative) RNA helicase GB:CAA09211
[Arabidopsis thaliana] (Nucleic Acids Res. 27 (2),
628-636 (1999))
Length = 414
Score = 28.7 bits (61), Expect = 2.5
Identities = 20/75 (26%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Frame = -1
Query: 332 SRVAVT--LVNCGVCA*KIIILFSFDIPTNTPSPRHKATGKGA*FLQPYLSSNWKISLDD 159
SRV +T L+ G+ ++ ++ +FD+PT + H+ G+ F + ++ N+ S D+
Sbjct: 331 SRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHR-IGRSGRFGRKGVAINFMTSEDE 389
Query: 158 KFCSAIILRNFYDMV 114
+ + I + FY++V
Sbjct: 390 RMMADI--QRFYNVV 402
>At1g09710.1 68414.m01090 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain
Length = 689
Score = 28.7 bits (61), Expect = 2.5
Identities = 19/36 (52%), Positives = 22/36 (61%), Gaps = 8/36 (22%)
Frame = -2
Query: 502 AILHALS------PPSTPVFIG--SRRSYPNNSVIY 419
A+ HALS PPS + IG SRRS+P NS IY
Sbjct: 309 AVNHALSLALGNRPPSNKLAIGTSSRRSFPANSSIY 344
>At1g54270.1 68414.m06187 eukaryotic translation initiation factor
4A-2 / eIF-4A-2 similar to eukaryotic translation
initiation factor 4A GI:19696 from [Nicotiana
plumbaginifolia]
Length = 412
Score = 28.3 bits (60), Expect = 3.2
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Frame = -1
Query: 332 SRVAVT--LVNCGVCA*KIIILFSFDIPTNTPSPRHKATGKGA*FLQPYLSSNWKISLDD 159
SRV +T L+ G+ ++ ++ +FD+PT + H+ G+ F + ++ N+ ++LDD
Sbjct: 329 SRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHR-IGRSGRFGRKGVAINF-VTLDD 386
Query: 158 KFCSAIILRNFYDMVRYYCACVVVSM*PSN 69
+ R +D+ ++Y VVV PSN
Sbjct: 387 Q-------RMLFDIQKFY--NVVVEELPSN 407
>At3g03990.1 68416.m00420 esterase/lipase/thioesterase family
protein low similarity to 3-oxoadipate enol-lactone
hydrolase [Pseudomonas sp. B13] GI:17736948, esterase V
[Pseudomonas sp.] GI:402521; contains Interpro entry
IPR000379
Length = 267
Score = 27.5 bits (58), Expect = 5.7
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = -1
Query: 197 PYLSSNWKISLDDKFCSAIILRNFYDMVRY 108
PY + N+++ L D C+ + +++D RY
Sbjct: 40 PYFTQNYRVVLYDLVCAGSVNPDYFDFNRY 69
>At2g26490.1 68415.m03178 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
related to En/Spm transposon family of maize
Length = 465
Score = 27.5 bits (58), Expect = 5.7
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +1
Query: 127 KFRKIM-AEQNLSSKEIFQLEDKYGCRNYAPLPVALCRGEGVFVGMSKEKSIMI 285
K+ +M ++ NLSS Q E++YG RN + V G G++ MS E S M+
Sbjct: 12 KYANMMHSDPNLSSTMTQQTEEEYGIRNSSASAV----GTGMYDRMSCEGSPMM 61
>At5g43310.1 68418.m05293 COP1-interacting protein-related contains
similarity to COP1-Interacting Protein 7 (CIP7)
[Arabidopsis thaliana] GI:3327868
Length = 1237
Score = 27.1 bits (57), Expect = 7.5
Identities = 16/62 (25%), Positives = 31/62 (50%)
Frame = +3
Query: 243 RSVRWDVEGKKYYDFLSAYSAVNQGHCHPRIIEALKKQADNLTLVSRAFYSDQLGKYEKY 422
RS+ D + D +S S + +G I+E +++ ++L LV SD + + K+
Sbjct: 1019 RSISRDQVKNEKSDVVSENSTIREGVDKEGIVETMQECGNDLVLVRLETLSDLVTETPKF 1078
Query: 423 MT 428
+T
Sbjct: 1079 LT 1080
>At3g59290.1 68416.m06609 epsin N-terminal homology (ENTH)
domain-containing protein contains Pfam PF01417: ENTH
domain. ENTH (Epsin N-terminal homology) domain;
similar to Af10-protein - Avena fatua, EMBL:U80041
Length = 1024
Score = 27.1 bits (57), Expect = 7.5
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 315 GHCHPRIIEALKKQADNLTLVSRAFYSDQLGK 410
GH R+IE +K+ A +T +S Y D GK
Sbjct: 92 GHGSERVIEEVKEHAYQITTLSGFQYIDSSGK 123
>At3g22200.1 68416.m02801 4-aminobutyrate aminotransferase /
gamma-amino-N-butyrate transaminase / GABA transaminase
/ beta-alanine--oxoglutarate aminotransferase identical
to gamma-aminobutyrate transaminase subunit precursor
[Arabidopsis thaliana] (EC 2.6.1.19) GI:14030435;
contains Pfam profile PF00202: aminotransferase, class
III; identical to cDNA gamma-aminobutyrate transaminase
subunit precursor, nuclear gene for mitochondrial
product GI:14030434
Length = 504
Score = 26.6 bits (56), Expect = 9.9
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +3
Query: 255 WDVEGKKYYDFLSAYSAVNQGHCHPRIIEALKKQADNL 368
+D GKKY D L+ G PR++ A +Q + L
Sbjct: 82 YDDTGKKYLDSLAGLWCTALGGNEPRLVSAAVEQLNTL 119
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,507,858
Number of Sequences: 28952
Number of extensions: 237962
Number of successful extensions: 510
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 502
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 509
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 937669760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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